Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe16g00526 ATGGCTTTTGGTAGTTCTAAATCCGTTAGGTTCCAAGACACTCTTGAATCATCTACCTTGCCTGCTATCAATGGTGGCGGTGTGACGAAGATCGTATACAATATCGATGGCACACAAATACCGGATTCTAGCAGCAAGAGAACTGCATCTTCTGGGAAGTCTGGAAGATCATTAAGAGCTAAGGTTTTGTCTAGAGTTTTCTCAGAGGATTACGAGAGAGTACAACGAAAAATATTGGATCCTAGAGGACAAGCGATAAGGCGATGGAATAAGATATTTTTAGTAGCTTGTTTAGTCTCGTTGTTTGTAGACCCTCTTTTCTTTTACTTGCCTATGGTCCGGGACGAGGAGTGCATCGATATAGGAGTAGGTGTCGAAGTTGTCCTCACGACTATAAGATCGATAGCTGATCTTTTCTACACAATTCAGATTTTTGTTAAGTTTCGTACAGCTTATGTTGCGCCTTCTTCTCGTGTATTTGGGAGAGGAGAGCTTGTTATAGATCCTTGTAAGATAGCAATAAGGTATCTACGCCATGGTTTTTGGATCGATCTCATTGCAGCCGTGCCAGTTCCTCAGGTACTGATTTGGATTGTCATCCCCAACCTTAGTGGTTCGACAATGACGAACACGAAGAACTTCCTAAGGTTCTTTCTCATATTTCAGTACCTCCCAAGGCTTTTTCTCATATTTCCGCTCTCGACACAAATCGTTAAGGCCACTGGACTTGTGACACAAACAGCATGGGCTGGAGCTGCTTATAACTTGATTCTTTATATGTTGGCAAGCCATGTTTTAGGAGCATGCTGGTACCTTCTTTCAATCGAGCGACAAGAAGCATGTTGGAGAAGACTTTGTACGGTTGAAAAATCTTGTAACGATGGATTCTTCGACTGTCATAAGGTCGATGACCCTCGAAGGGATTCGTGGTTTAATACAAGCAACATTAAAACTTTATGCAATCCAGATGATCCATTTTATCAATTCGGTATATATGGCGACGCGATAACTTTCCATGTCACGACCTCTCCATTTTTCAACAAGTACTTCTATTGTCTTTGGTGGGGCCTGAAGAATCTCAGTTCTTTGGGACAAAATCTTGCCACAAGCACTTTTGTTGGTGAAATAATTTTTGCCATAATTGTAGCAACTCTTGGACTGGTTCTGTTTGCATTGCTCATTGGTAATATGCAGAAATACCTCCAATCGACGACTGTTCGATTGGAAGAGTGGAGAATAAGAAGAACCGATACAGAACAATGGATGCATCATAGGCAGCTACCTCCCGAGCTCAGACAATCTGTCCGCAGATATGATCAGTATAAGTGGATAGCAACACGAGGCGTTGATGAAGAAGCCCTTCTTAGAAGCCTTCCCTTGGATCTCCGTAGAGACATCAAACGTCATCTTTGCCTCGACCTTGTTCGACGGGTTCCATTGTTTGATCAAATGGATGAAAGAATGCTCGATGCAATATGCGAGAGACTTAAACCTGCCTTGAGTACAGAAGGCACGTTTCTCGTTCGAGAAGGCGACCCCGTCAATGAAATGTTGTTTATAATCAGAGGTCATCTTGATTCATACACCACGAATGGCGGTAGAACCGGATTTTTCAACTCCTGTCGTATTGGCCCGGGCGATTTCTGTGGTGAGGAGCTGCTAACTTGGGCGCTCGACCCTCGTCCAAGCATTGTACTTCCTTCTTCGACTCGAACTGTCAAAGCCATCTCTGAGGTAGAAGCATTTGCTCTCATAGCAGAGGATTTGAAATTCGTATCCTCCCAGTTCAGAAGACTCCATAGCAAACAACTGAGACACAAGTTTCGATTTCACTCGCATCAATGGCGAACGTGGGCTGCATGCTTTGTTCAAGCTGCATGGCGGCGATATAAGAGACGTAAAGAACGAGCTGAGCTCAGGGCTAGAGAGAGCTATCCAGCTACCAAAGTCGAGTCCCCACATTCACCACCAATGGCATCGAACTTGGATTCACGTTCGGGAAATGCTCGAAGGGGTATGAATAAGCGTTCTGTATCGGATGCTGGGGTCGTAAGCTCGTTGCAGAAGCCAGAAGAGCCCGATTTCTCCATTGTTGAGGAATGA 2103 44.32 MAFGSSKSVRFQDTLESSTLPAINGGGVTKIVYNIDGTQIPDSSSKRTASSGKSGRSLRAKVLSRVFSEDYERVQRKILDPRGQAIRRWNKIFLVACLVSLFVDPLFFYLPMVRDEECIDIGVGVEVVLTTIRSIADLFYTIQIFVKFRTAYVAPSSRVFGRGELVIDPCKIAIRYLRHGFWIDLIAAVPVPQVLIWIVIPNLSGSTMTNTKNFLRFFLIFQYLPRLFLIFPLSTQIVKATGLVTQTAWAGAAYNLILYMLASHVLGACWYLLSIERQEACWRRLCTVEKSCNDGFFDCHKVDDPRRDSWFNTSNIKTLCNPDDPFYQFGIYGDAITFHVTTSPFFNKYFYCLWWGLKNLSSLGQNLATSTFVGEIIFAIIVATLGLVLFALLIGNMQKYLQSTTVRLEEWRIRRTDTEQWMHHRQLPPELRQSVRRYDQYKWIATRGVDEEALLRSLPLDLRRDIKRHLCLDLVRRVPLFDQMDERMLDAICERLKPALSTEGTFLVREGDPVNEMLFIIRGHLDSYTTNGGRTGFFNSCRIGPGDFCGEELLTWALDPRPSIVLPSSTRTVKAISEVEAFALIAEDLKFVSSQFRRLHSKQLRHKFRFHSHQWRTWAACFVQAAWRRYKRRKERAELRARESYPATKVESPHSPPMASNLDSRSGNARRGMNKRSVSDAGVVSSLQKPEEPDFSIVEE 700
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 6198876 6202802 + Cp4.1LG16g05170.1 Cpe16g00526 482901
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe16g00526 700 MobiDBLite consensus disorder prediction 641 700 - -
Cpe16g00526 700 Gene3D Helix hairpin bin 407 471 - -
Cpe16g00526 700 MobiDBLite consensus disorder prediction 654 684 - -
Cpe16g00526 700 Gene3D - 85 404 - -
Cpe16g00526 700 CDD CAP_ED 480 611 IPR000595 -
Cpe16g00526 700 SUPERFAMILY cAMP-binding domain-like 410 605 IPR018490 -
Cpe16g00526 700 SUPERFAMILY Voltage-gated potassium channels 80 402 - -
Cpe16g00526 700 ProSiteProfiles cAMP/cGMP binding motif profile. 480 577 IPR000595 -
Cpe16g00526 700 PRINTS EAG/ELK/ERG potassium channel family signature 144 153 IPR003938 GO:0005249|GO:0006813|GO:0016020
Cpe16g00526 700 PRINTS EAG/ELK/ERG potassium channel family signature 261 271 IPR003938 GO:0005249|GO:0006813|GO:0016020
Cpe16g00526 700 PRINTS EAG/ELK/ERG potassium channel family signature 349 366 IPR003938 GO:0005249|GO:0006813|GO:0016020
Cpe16g00526 700 PRINTS EAG/ELK/ERG potassium channel family signature 375 386 IPR003938 GO:0005249|GO:0006813|GO:0016020
Cpe16g00526 700 PRINTS EAG/ELK/ERG potassium channel family signature 393 402 IPR003938 GO:0005249|GO:0006813|GO:0016020
Cpe16g00526 700 PRINTS EAG/ELK/ERG potassium channel family signature 443 450 IPR003938 GO:0005249|GO:0006813|GO:0016020
Cpe16g00526 700 SMART cnmp_10 480 611 IPR000595 -
Cpe16g00526 700 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 7 699 - -
Cpe16g00526 700 Pfam Ion transport protein 89 407 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Cpe16g00526 700 Gene3D Jelly Rolls 478 598 IPR014710 -
Cpe16g00526 700 PANTHER - 7 699 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe04g01281 Cpe-Chr4:10588515 Cpe16g00526 Cpe-Chr16:6198876 0 dispersed
Cpe09g00037 Cpe-Chr9:226294 Cpe16g00526 Cpe-Chr16:6198876 0 dispersed
Cpe16g00526 Cpe-Chr16:6198876 Cpe18g00596 Cpe-Chr18:6342951 0 dispersed
Cpe14g00704 Cpe-Chr14:4622628 Cpe16g00526 Cpe-Chr16:6198876 9.18E-79 transposed
Cpe10g00221 Cpe-Chr10:1262951 Cpe16g00526 Cpe-Chr16:6198876 0 wgd
Cpe16g00526 Cpe-Chr16:6198876 Cpe05g00811 Cpe-Chr5:5023238 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe16g00526 K05391 - csv:101210775 1322.38