Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe16g00536 ATGGCGAAGGACGTTGAAGCAGCCGAGCAAGGCGAATTCCACGGCAAGGACTACCAAGACCCACCCCCCGCCCCTTTAATCGACCCCGACGAGCTCACCAAATGGTCCCTTTACCGAGCCGCCATCGCCGAGTTCATCGCTACTCTCCTCTTCCTTTACGTCACCGTTTTGACCGTCATCGGCTACTCCCACCAAAGCGACCCTAACGTCTCCAAAGACCCATGTAACGGCGTCGGAATCCTCGGCATCGCCTGGGCCTTCGGCGGCATGATCTTCATCCTCGTTTACTGCACCGCCGGTATCTCCGGTGGCCACATTAACCCAGCTGTCACTTTCGGCCTCTTTTTAGCTCGTAAGGTGTCCCTCGTTCGGGCTTTGTTGTACATCATTGCTCAATGTGCCGGCGCTATCTGCGGCTGTGGCTTGGTCAAAGCCTTCCAGTCCGCCTACTATGTTAGGTATAACGGCGGCGCTAATATGCTCGCCGACGGTTACAACAAAGGCACTGGTTTGGGAGCTGAAATCATCGGTACATTTGTTCTTGTTTACACTGTCTTCTCCGCCACTGATCCCAAGAGAAACGCTAGAGATTCCCATGTTCCTGTTTTGGCGCCACTCCCAATTGGATTTGCAGTGTTCATGGTTCACTTGGCTACAATCCCCATCACCGGAACTGGTATTAACCCAGCAAGAAGCTTCGGAGCTGCTGTCATATTCAACACAGAGAAGGCCTGGGATGATCAATGGATTTTCTGGGTTGGGCCATTCATCGGAGCTGCCATTGCTGCCATTTACCACCAGTATGTTCTCAGAGCTGGCGCCATTAAAGCTCTTGGATCCTTCAGAAGCAACGCTTGA 858 53.15 MAKDVEAAEQGEFHGKDYQDPPPAPLIDPDELTKWSLYRAAIAEFIATLLFLYVTVLTVIGYSHQSDPNVSKDPCNGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLARKVSLVRALLYIIAQCAGAICGCGLVKAFQSAYYVRYNGGANMLADGYNKGTGLGAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIFNTEKAWDDQWIFWVGPFIGAAIAAIYHQYVLRAGAIKALGSFRSNA 285
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 6270595 6272081 + Cp4.1LG16g05300.1 Cpe16g00536 482911
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe16g00536 285 Pfam Major intrinsic protein 31 266 IPR000425 GO:0015267|GO:0016020|GO:0055085
Cpe16g00536 285 SUPERFAMILY Aquaporin-like 31 271 IPR023271 -
Cpe16g00536 285 PRINTS Major intrinsic protein family signature 39 58 IPR000425 GO:0015267|GO:0016020|GO:0055085
Cpe16g00536 285 PRINTS Major intrinsic protein family signature 87 111 IPR000425 GO:0015267|GO:0016020|GO:0055085
Cpe16g00536 285 PRINTS Major intrinsic protein family signature 124 143 IPR000425 GO:0015267|GO:0016020|GO:0055085
Cpe16g00536 285 PRINTS Major intrinsic protein family signature 173 191 IPR000425 GO:0015267|GO:0016020|GO:0055085
Cpe16g00536 285 PRINTS Major intrinsic protein family signature 209 231 IPR000425 GO:0015267|GO:0016020|GO:0055085
Cpe16g00536 285 PRINTS Major intrinsic protein family signature 249 269 IPR000425 GO:0015267|GO:0016020|GO:0055085
Cpe16g00536 285 CDD MIP 39 269 IPR000425 GO:0015267|GO:0016020|GO:0055085
Cpe16g00536 285 Gene3D Glycerol uptake facilitator protein. 24 285 IPR023271 -
Cpe16g00536 285 ProSitePatterns MIP family signature. 105 113 IPR022357 -
Cpe16g00536 285 PANTHER AQUAPORIN PIP2-4-RELATED 1 285 - -
Cpe16g00536 285 TIGRFAM MIP: MIP family channel proteins 43 265 IPR000425 GO:0015267|GO:0016020|GO:0055085
Cpe16g00536 285 PANTHER AQUAPORIN OR AQUAGLYCEROPORIN RELATED 1 285 IPR034294 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe13g00151 Cpe-Chr13:1096359 Cpe16g00536 Cpe-Chr16:6270595 3.76E-142 dispersed
Cpe16g00536 Cpe-Chr16:6270595 Cpe19g00410 Cpe-Chr19:3623233 1.70E-162 dispersed
Cpe01g02241 Cpe-Chr1:19049402 Cpe16g00536 Cpe-Chr16:6270595 7.80E-166 wgd
Cpe10g00212 Cpe-Chr10:1212635 Cpe16g00536 Cpe-Chr16:6270595 3.65E-146 wgd
Cpe13g00804 Cpe-Chr13:7202436 Cpe16g00536 Cpe-Chr16:6270595 4.13E-20 wgd
Cpe16g00536 Cpe-Chr16:6270595 Cpe19g00409 Cpe-Chr19:3617325 1.95E-167 wgd
Cpe16g00536 Cpe-Chr16:6270595 Cpe05g00821 Cpe-Chr5:5093243 0 wgd
Cpe16g00536 Cpe-Chr16:6270595 Cpe08g01099 Cpe-Chr8:8324588 6.49E-154 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe16g00536 K09872 - csv:101215300 537.724