Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe16g00545 ATGAGGAGCTGGAAGTCGTGGGAAAACGAAACGAGGACGGTCGAGTACCAATTTTCACATGATCCAGAACGGTTCCGTTTTGCAAGATACACGTCGTTCGGGCGAAGACATTTGAGTTTCTGGACCAAATCGCCCTTCCTCATGTGGATCGTTTGTTTCTTCCGACAATTTGTTCGGTCCGTTCCTAAGGTTGATTACTTGACTTTAAGACATGGTTTCGTCATGGCACACCTGGCACCGCACAGCGACCAGAAATTTGACTTTAGGAAATACATCAAGCGATCGCTGGAAGAAGATTTCAAGGTGGTTGTCAGTATCAGCCCACCCATCTGGTTCTTCGCTGTACTCTTCCTGCTTTTCAATACCCACGGGTGGAGGGCTTATCTATGGCTGCCATTTGTGCCATTAATTATTGTGTTATTGGTGGGGACTAAGTTGCAAGTGATAATTACGAAAATGGGCCTGAGGATTCAGGAACGAGGGGAGGTGGTGAAGGGTGTCCCGGTGGTCGAACCGGGGGACGACCTGTTTTGGTTCAACCGGCCCCGGCTCATTCTTTATCTCATCAATTTTGTGCTCTTTCAGAATGCCTTTCAGCTTGCTTTCTTTGCTTGGACTTGGAAAGAATTCGGGATGAAATCTTGTTTTCACGAGCATATCGAAGATTTGGTGATCAGAATAACAATGGGAGTTCTCGTTCAAATCCTTTGCAGTTACGTCACGTTGCCTCTCTACGCCCTCGTCACACAGATGGGTTCGACGATGAAGCCAACGATTTTCAACGATAGAGTAGCGACAGCGTTGAGAAACTGGCACCACACGGCTCGCAAACACATAAAGCAAAATCGGGGGTCGATGACGCCGATGTCGAGTCGCCCTGCTACGCCCTCCCACCACATGTCACCAGTGCACCTTCTCCGCCACTATCGAAGCGAATTGGACAGTTTCCATACCTCTCCTAGAAGATCAAATTTCGACAACGACCAATGGGATCCAGACTCCCCTTCGCCGTCGCACCATTTCCACCGCCGCCCTCTCGATGTCGAAGGCTCCAGTTCCCACAAACACCACCTCCATCGCAACATGGAGGTCAGCGATGCCGATATTGATAGAGATTCACCCCAAATCGACTCGACGACCCAGATACCAAATTTGAATGCGAATAATAACCGTGAGCAGCACGAGATTGACGTGGGCCCGAAGGAATTCTCGTTCGATAGAAGAGTCGATGGAGTATGA 1239 49.23 MRSWKSWENETRTVEYQFSHDPERFRFARYTSFGRRHLSFWTKSPFLMWIVCFFRQFVRSVPKVDYLTLRHGFVMAHLAPHSDQKFDFRKYIKRSLEEDFKVVVSISPPIWFFAVLFLLFNTHGWRAYLWLPFVPLIIVLLVGTKLQVIITKMGLRIQERGEVVKGVPVVEPGDDLFWFNRPRLILYLINFVLFQNAFQLAFFAWTWKEFGMKSCFHEHIEDLVIRITMGVLVQILCSYVTLPLYALVTQMGSTMKPTIFNDRVATALRNWHHTARKHIKQNRGSMTPMSSRPATPSHHMSPVHLLRHYRSELDSFHTSPRRSNFDNDQWDPDSPSPSHHFHRRPLDVEGSSSHKHHLHRNMEVSDADIDRDSPQIDSTTQIPNLNANNNREQHEIDVGPKEFSFDRRVDGV 412
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 6302630 6305984 - Cp4.1LG16g05390.1 Cpe16g00545 482920
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe16g00545 412 MobiDBLite consensus disorder prediction 316 373 - -
Cpe16g00545 412 PANTHER MLO-LIKE PROTEIN 1 358 - -
Cpe16g00545 412 MobiDBLite consensus disorder prediction 281 297 - -
Cpe16g00545 412 MobiDBLite consensus disorder prediction 276 300 - -
Cpe16g00545 412 PANTHER MLO-LIKE PROTEIN 1 1 358 IPR004326 GO:0006952|GO:0016021
Cpe16g00545 412 MobiDBLite consensus disorder prediction 394 412 - -
Cpe16g00545 412 Pfam Mlo family 1 309 IPR004326 GO:0006952|GO:0016021
Cpe16g00545 412 MobiDBLite consensus disorder prediction 374 393 - -
Cpe16g00545 412 MobiDBLite consensus disorder prediction 316 412 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe05g01418 Cpe-Chr5:9937940 Cpe16g00545 Cpe-Chr16:6302630 6.01E-10 dispersed
Cpe09g00424 Cpe-Chr9:2695619 Cpe16g00545 Cpe-Chr16:6302630 1.26E-176 dispersed
Cpe16g00545 Cpe-Chr16:6302630 Cpe19g00902 Cpe-Chr19:6561344 1.30E-115 dispersed
Cpe16g00545 Cpe-Chr16:6302630 Cpe02g01293 Cpe-Chr2:11511935 7.19E-110 wgd
Cpe16g00545 Cpe-Chr16:6302630 Cpe20g00762 Cpe-Chr20:6767263 1.80E-104 wgd
Cpe16g00545 Cpe-Chr16:6302630 Cpe05g00830 Cpe-Chr5:5135772 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe16g00545 K08472 - csv:101212018 734.176