Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cpe16g00570 | ATGCAGCAGAGATCTTCGACTTCGAGTTCGTTTCGAGCAACAACTGACGATCATTGTAGCATAATCTTCAGCCCGGCACAAGAGCCACAAGGAAGATGCTCTCCAGAAACAAGATCAATGGACGATTCCAGCGGTAGTATTCTTCCAGTTTCCGATCCTTCGTGTCGGAAGCGAGATCACAATTCGCGATACAAATTCTCGGAGAGGTGGATTCATTTGATTCCTTTGATTCTGCTCCTCGTCCTCTTCATTCTCTGGTGGTCATCTTATCCAGTGAATTTGGTGATCAACGATGGAGGAATTAAAGCAGTTTATGCAAGTGAGTTTCCGGAGGCGCCGAAGTACATTGATCATGTCGAACTTGCCATCTTAGGAGATGCCGGAATGCACATTGCTTCGAGTCCTCTGAATCTAACCAGCGTTGGCGCTCGAGATTTACGGACACCAGCTAGGAACTTTGTTGATAGAGATGAGGGGGTGACAACTGACAAAACTATCCTCATAAGATGCATTGGCGTCAGAGACCTAATGGAACCGTTGGATAAACCAGCGTCAAACTCCTCGCCTCTCGCGCCATTTCCTCGGGACGCGCGAGGATCGCTAGAGGTTTTCAATCCCTCGGCCGCGTACTCATCCCATTCGATCAACTCCATTTCTCGAGCGAACCCAACGTGGCCAAGTTGGGCGGAGGCGGACTCGGCCAAACTCGCCGCTAAACCGGCGAGTAAAACCGGCGACGAGATAACGTCATGGATGGCCTTCAAGGACTCGAACGCTCCACCACAACCTTCATCGCCGGTCGTCCAGAAAACCATCTCGGCGATTCTCAGCGACAAACCGCCGTCAGAAAAGCCGCAATCGGCGGACGAAGTCGGCTCCGCAGCTTTACGCGCTGCCGAGTGGGGACTGGTACTGAAAACCGATACGGAGACGGGAAAGCCTCAGGGAGTCGGAGTTCGAACTTCCGGCGGCGATGAACCGAATATTAAACAAGAGAATTCCAGAAGAGGTTCCAATAACTCGGTGCGAAGTTCGGGCGACATGTCGGAAGAAGGGGGAAGAGAAAGGGGGTTTCCTAGAGTCTCCGAGGATTTGAAAGACGCTCTGTCGACTTTTCAACAAACATTCGTGGTTTCCGATGCTACGAAACCGGATTATCCGATTATGTACGCCAGCGCCGGATTCTTCAAGATGACCGGCTACACCTCCAAGGAGGTCATCGGAAGAAACTGTCGATTTTTACAGGGTGCAGACACAGACCCTGAAGATGTGGCCAAGATCCGGGAAGGTTTACAAGCTGGGACGAGTTACTGTGGGAGAATGCAAGTGGAGGTGAGCAAACACACAGAGGGGTTCAAAGACAAGATGGTCCGTCCCAATGGCTTGCCAGAATCCTTGATTCGTTATGACGCACGTCAGAAGGAGATGGCCACCAGCTCGGTGACGGAGCTTGTGCAGGCGGTGAAAAGGCCACGGTCTCTAAGTGAGTCTAGGCCTCGGGCTCTAAGTGAATCTATGAACCGTCGGCTATTTAGAAAATCCGGCGGCGGCGGCGGCGGCGGGGATAATGACGGCGACAGATTTGAAACTGGTATGGTTAGGCGAAAGTCAGAGAGCGCTGCAGCTTCAACTGGACGAGGAAGTCGAAGGTCGATGCAGCGTATCAATGAGGTTCCCGACAAGAAACCCAAGAAGTCTAGCCGTCGTTCATTTATGGGGATTATGAGGAAAAGTCAATCAAATGTTGATATCATCGACGTTGAAAATGGTTCCGACGACGATAACGACACTGATGACGACGATAGACCAGATAGTGTCGACGACAAAGTAAGGCAGAGGGAAATGAGGAAGGGTATTGATTTAGCTACCACCCTCGAACGTATAGAGAAAAACTTCGTCATTACCGATCCTAGATTGCCCGACAATCCCATTATCTTTGCTTCTGATAGCTTCCTGGAGCTAACCGAATTTCTGCAAGGTCCCGAAACCGATCGAGCGACCGTCAAGAAAATAAGAGATGCAATCGACAACCAAACCGAAGTTACCGTGCAGCTTATTAACTACACAAAAAGTGGTAAGAAGTTTTGGAACCTGTTTCATCTACAACCTATGCGTGACCAGAAGGGAGAAGTTCAGTATTTCATTGGAGTTCAACTCGATGGTAGTCAGCATGTCGAACCGCTAAGCAATTGCATACCGGAAACTACTGCGAAGCACGGCGAAAAATTGATAAAAGAAACTGCAGAAAATGTCGATTTGGCAGCTCGAGAACTTCCCGACGCCAATTTGACACCAGAAGATTTATGGGCAAATCATTCTAAGATGGTTCAACCTAAACCTCACAGAAAGGACAGTCCTTCCTGGAAAGCTATCCAGAAGATTTTAGACAGCGGAGAACAGATCGAACTGAAACATTTCAAGCCAGTTAAACCGTTGGGATCCGGCGATACTGGCAGCGTGCATTTGGTAGAACTGTGTGGAACTGATCAATTTTTTGCAATGAAGGCAATGGATAAGGGTGTTATGCTCAACCGTAACAAGGTGCATCGAGCTTGCGCCGAGAGGGAAATACTCGACATGTTGGATCATCCTTTTCTTCCTGCATTGTACGCTTCATTTCAGACAAAAACACATGTTTGTCTTATAACTGATTACTGTCCTGGTGGAGAACTGTTTCTGCTTTTGGACAGACAACCCACAAAGGTCTTGAAGGAAGATGCTGTGAGGGATAATTTACCGGGATCTGAAGCCCGAGAATGTTCTACTACAAGGCAATGGACACGTTGCCTTGACGGATTTCGACTTGTCATGTTTGACGTCTTGACTTCTCTTGATGTGAATTCTGCAATTCTGCAGCTTTTGCTTCCAACAACAAATGAGAAGAAAAAACAATCAAGAGCTCAACAGGCTCCCGTCTTTATGGCCGAACCTATGCGAGCATCGAACTCCTTCGTCGGAACCGAAGAGTACATAGCACCGGAAATTATTACTGGGGCTGGCCATACTAGTGCAGTGGACTGGTGGGCTTTGGGTATCCTTCTATATGAGATGCTCTATGGCTACACACCCTTTAGAGGGAAGACAAGGCAAAAGACTTTCGCCAACATTCTTCATAAGGATCTTAAGTTTCCGAGAAAGAAGCTTCATTTCATAACATATCCGGTTGTTTTTCAGCATCCTCCCGAGCTCGAAGCGTCTCTTTTCCTGACCGTCGAACCCGAAAAAGATGCTAATAATAAAGCTCCAGATTTGGACATAAAAGCTCTTGACCTCAGTGTGTTCTGA | 3285 | 48.22 | MQQRSSTSSSFRATTDDHCSIIFSPAQEPQGRCSPETRSMDDSSGSILPVSDPSCRKRDHNSRYKFSERWIHLIPLILLLVLFILWWSSYPVNLVINDGGIKAVYASEFPEAPKYIDHVELAILGDAGMHIASSPLNLTSVGARDLRTPARNFVDRDEGVTTDKTILIRCIGVRDLMEPLDKPASNSSPLAPFPRDARGSLEVFNPSAAYSSHSINSISRANPTWPSWAEADSAKLAAKPASKTGDEITSWMAFKDSNAPPQPSSPVVQKTISAILSDKPPSEKPQSADEVGSAALRAAEWGLVLKTDTETGKPQGVGVRTSGGDEPNIKQENSRRGSNNSVRSSGDMSEEGGRERGFPRVSEDLKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVIGRNCRFLQGADTDPEDVAKIREGLQAGTSYCGRMQVEVSKHTEGFKDKMVRPNGLPESLIRYDARQKEMATSSVTELVQAVKRPRSLSESRPRALSESMNRRLFRKSGGGGGGGDNDGDRFETGMVRRKSESAAASTGRGSRRSMQRINEVPDKKPKKSSRRSFMGIMRKSQSNVDIIDVENGSDDDNDTDDDDRPDSVDDKVRQREMRKGIDLATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEFLQGPETDRATVKKIRDAIDNQTEVTVQLINYTKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGSQHVEPLSNCIPETTAKHGEKLIKETAENVDLAARELPDANLTPEDLWANHSKMVQPKPHRKDSPSWKAIQKILDSGEQIELKHFKPVKPLGSGDTGSVHLVELCGTDQFFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFLPALYASFQTKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRDNLPGSEARECSTTRQWTRCLDGFRLVMFDVLTSLDVNSAILQLLLPTTNEKKKQSRAQQAPVFMAEPMRASNSFVGTEEYIAPEIITGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHKDLKFPRKKLHFITYPVVFQHPPELEASLFLTVEPEKDANNKAPDLDIKALDLSVF | 1094 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
16 | 6489886 | 6504077 | + | Cp4.1LG16g05670.1 | Cpe16g00570 | 482945 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cpe16g00570 | 1094 | MobiDBLite | consensus disorder prediction | 587 | 603 | - | - | |
Cpe16g00570 | 1094 | Gene3D | Phosphorylase Kinase; domain 1 | 791 | 924 | - | - | |
Cpe16g00570 | 1094 | MobiDBLite | consensus disorder prediction | 572 | 586 | - | - | |
Cpe16g00570 | 1094 | PANTHER | PHOTOTROPIN-1 | 311 | 441 | - | - | |
Cpe16g00570 | 1094 | ProSiteProfiles | PAC domain profile. | 679 | 733 | IPR000700 | - | |
Cpe16g00570 | 1094 | MobiDBLite | consensus disorder prediction | 23 | 54 | - | - | |
Cpe16g00570 | 1094 | CDD | PAS | 632 | 720 | IPR000014 | - | |
Cpe16g00570 | 1094 | ProSitePatterns | Protein kinases ATP-binding region signature. | 812 | 835 | IPR017441 | GO:0005524 | |
Cpe16g00570 | 1094 | PANTHER | FLIPPASE KINASE 1-RELATED | 441 | 1047 | - | - | |
Cpe16g00570 | 1094 | MobiDBLite | consensus disorder prediction | 553 | 567 | - | - | |
Cpe16g00570 | 1094 | SMART | serkin_6 | 806 | 1092 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cpe16g00570 | 1094 | Pfam | PAS domain | 640 | 720 | IPR000014 | - | |
Cpe16g00570 | 1094 | Pfam | PAS domain | 382 | 461 | IPR000014 | - | |
Cpe16g00570 | 1094 | MobiDBLite | consensus disorder prediction | 493 | 507 | - | - | |
Cpe16g00570 | 1094 | Gene3D | Transferase(Phosphotransferase) domain 1 | 979 | 1046 | - | - | |
Cpe16g00570 | 1094 | Gene3D | PAS domain | 375 | 452 | - | - | |
Cpe16g00570 | 1094 | PANTHER | FLIPPASE KINASE 1-RELATED | 311 | 441 | - | - | |
Cpe16g00570 | 1094 | Pfam | Protein kinase domain | 981 | 1039 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cpe16g00570 | 1094 | Pfam | Protein kinase domain | 808 | 909 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cpe16g00570 | 1094 | SUPERFAMILY | PYP-like sensor domain (PAS domain) | 382 | 441 | IPR035965 | - | |
Cpe16g00570 | 1094 | MobiDBLite | consensus disorder prediction | 333 | 347 | - | - | |
Cpe16g00570 | 1094 | ProSiteProfiles | Protein kinase domain profile. | 806 | 1094 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cpe16g00570 | 1094 | PANTHER | PHOTOTROPIN-1 | 441 | 1047 | - | - | |
Cpe16g00570 | 1094 | SUPERFAMILY | PYP-like sensor domain (PAS domain) | 633 | 720 | IPR035965 | - | |
Cpe16g00570 | 1094 | MobiDBLite | consensus disorder prediction | 30 | 50 | - | - | |
Cpe16g00570 | 1094 | MobiDBLite | consensus disorder prediction | 305 | 359 | - | - | |
Cpe16g00570 | 1094 | SUPERFAMILY | Protein kinase-like (PK-like) | 801 | 1044 | IPR011009 | - | |
Cpe16g00570 | 1094 | CDD | PAS | 388 | 446 | IPR000014 | - | |
Cpe16g00570 | 1094 | Gene3D | PAS domain | 605 | 758 | - | - | |
Cpe16g00570 | 1094 | ProSiteProfiles | PAS repeat profile. | 361 | 432 | IPR000014 | - | |
Cpe16g00570 | 1094 | MobiDBLite | consensus disorder prediction | 488 | 613 | - | - | |
Cpe16g00570 | 1094 | SMART | pac_2 | 682 | 724 | IPR001610 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cpe05g01329 | Cpe-Chr5:9339804 | Cpe16g00570 | Cpe-Chr16:6489886 | 0 | dispersed | |
Cpe16g00373 | Cpe-Chr16:5385784 | Cpe16g00570 | Cpe-Chr16:6489886 | 0 | dispersed | |
Cpe16g00570 | Cpe-Chr16:6489886 | Cpe16g00796 | Cpe-Chr16:7783762 | 1.94E-61 | dispersed | |
Cpe16g00570 | Cpe-Chr16:6489886 | Cpe05g00878 | Cpe-Chr5:5791431 | 0 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
62896 | PF00069 | Pkinase | 2.70E-16 | CL0016 | Cpe | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cpe16g00570 | K20715 | - | csv:101214662 | 1434.47 |