Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe16g00570 ATGCAGCAGAGATCTTCGACTTCGAGTTCGTTTCGAGCAACAACTGACGATCATTGTAGCATAATCTTCAGCCCGGCACAAGAGCCACAAGGAAGATGCTCTCCAGAAACAAGATCAATGGACGATTCCAGCGGTAGTATTCTTCCAGTTTCCGATCCTTCGTGTCGGAAGCGAGATCACAATTCGCGATACAAATTCTCGGAGAGGTGGATTCATTTGATTCCTTTGATTCTGCTCCTCGTCCTCTTCATTCTCTGGTGGTCATCTTATCCAGTGAATTTGGTGATCAACGATGGAGGAATTAAAGCAGTTTATGCAAGTGAGTTTCCGGAGGCGCCGAAGTACATTGATCATGTCGAACTTGCCATCTTAGGAGATGCCGGAATGCACATTGCTTCGAGTCCTCTGAATCTAACCAGCGTTGGCGCTCGAGATTTACGGACACCAGCTAGGAACTTTGTTGATAGAGATGAGGGGGTGACAACTGACAAAACTATCCTCATAAGATGCATTGGCGTCAGAGACCTAATGGAACCGTTGGATAAACCAGCGTCAAACTCCTCGCCTCTCGCGCCATTTCCTCGGGACGCGCGAGGATCGCTAGAGGTTTTCAATCCCTCGGCCGCGTACTCATCCCATTCGATCAACTCCATTTCTCGAGCGAACCCAACGTGGCCAAGTTGGGCGGAGGCGGACTCGGCCAAACTCGCCGCTAAACCGGCGAGTAAAACCGGCGACGAGATAACGTCATGGATGGCCTTCAAGGACTCGAACGCTCCACCACAACCTTCATCGCCGGTCGTCCAGAAAACCATCTCGGCGATTCTCAGCGACAAACCGCCGTCAGAAAAGCCGCAATCGGCGGACGAAGTCGGCTCCGCAGCTTTACGCGCTGCCGAGTGGGGACTGGTACTGAAAACCGATACGGAGACGGGAAAGCCTCAGGGAGTCGGAGTTCGAACTTCCGGCGGCGATGAACCGAATATTAAACAAGAGAATTCCAGAAGAGGTTCCAATAACTCGGTGCGAAGTTCGGGCGACATGTCGGAAGAAGGGGGAAGAGAAAGGGGGTTTCCTAGAGTCTCCGAGGATTTGAAAGACGCTCTGTCGACTTTTCAACAAACATTCGTGGTTTCCGATGCTACGAAACCGGATTATCCGATTATGTACGCCAGCGCCGGATTCTTCAAGATGACCGGCTACACCTCCAAGGAGGTCATCGGAAGAAACTGTCGATTTTTACAGGGTGCAGACACAGACCCTGAAGATGTGGCCAAGATCCGGGAAGGTTTACAAGCTGGGACGAGTTACTGTGGGAGAATGCAAGTGGAGGTGAGCAAACACACAGAGGGGTTCAAAGACAAGATGGTCCGTCCCAATGGCTTGCCAGAATCCTTGATTCGTTATGACGCACGTCAGAAGGAGATGGCCACCAGCTCGGTGACGGAGCTTGTGCAGGCGGTGAAAAGGCCACGGTCTCTAAGTGAGTCTAGGCCTCGGGCTCTAAGTGAATCTATGAACCGTCGGCTATTTAGAAAATCCGGCGGCGGCGGCGGCGGCGGGGATAATGACGGCGACAGATTTGAAACTGGTATGGTTAGGCGAAAGTCAGAGAGCGCTGCAGCTTCAACTGGACGAGGAAGTCGAAGGTCGATGCAGCGTATCAATGAGGTTCCCGACAAGAAACCCAAGAAGTCTAGCCGTCGTTCATTTATGGGGATTATGAGGAAAAGTCAATCAAATGTTGATATCATCGACGTTGAAAATGGTTCCGACGACGATAACGACACTGATGACGACGATAGACCAGATAGTGTCGACGACAAAGTAAGGCAGAGGGAAATGAGGAAGGGTATTGATTTAGCTACCACCCTCGAACGTATAGAGAAAAACTTCGTCATTACCGATCCTAGATTGCCCGACAATCCCATTATCTTTGCTTCTGATAGCTTCCTGGAGCTAACCGAATTTCTGCAAGGTCCCGAAACCGATCGAGCGACCGTCAAGAAAATAAGAGATGCAATCGACAACCAAACCGAAGTTACCGTGCAGCTTATTAACTACACAAAAAGTGGTAAGAAGTTTTGGAACCTGTTTCATCTACAACCTATGCGTGACCAGAAGGGAGAAGTTCAGTATTTCATTGGAGTTCAACTCGATGGTAGTCAGCATGTCGAACCGCTAAGCAATTGCATACCGGAAACTACTGCGAAGCACGGCGAAAAATTGATAAAAGAAACTGCAGAAAATGTCGATTTGGCAGCTCGAGAACTTCCCGACGCCAATTTGACACCAGAAGATTTATGGGCAAATCATTCTAAGATGGTTCAACCTAAACCTCACAGAAAGGACAGTCCTTCCTGGAAAGCTATCCAGAAGATTTTAGACAGCGGAGAACAGATCGAACTGAAACATTTCAAGCCAGTTAAACCGTTGGGATCCGGCGATACTGGCAGCGTGCATTTGGTAGAACTGTGTGGAACTGATCAATTTTTTGCAATGAAGGCAATGGATAAGGGTGTTATGCTCAACCGTAACAAGGTGCATCGAGCTTGCGCCGAGAGGGAAATACTCGACATGTTGGATCATCCTTTTCTTCCTGCATTGTACGCTTCATTTCAGACAAAAACACATGTTTGTCTTATAACTGATTACTGTCCTGGTGGAGAACTGTTTCTGCTTTTGGACAGACAACCCACAAAGGTCTTGAAGGAAGATGCTGTGAGGGATAATTTACCGGGATCTGAAGCCCGAGAATGTTCTACTACAAGGCAATGGACACGTTGCCTTGACGGATTTCGACTTGTCATGTTTGACGTCTTGACTTCTCTTGATGTGAATTCTGCAATTCTGCAGCTTTTGCTTCCAACAACAAATGAGAAGAAAAAACAATCAAGAGCTCAACAGGCTCCCGTCTTTATGGCCGAACCTATGCGAGCATCGAACTCCTTCGTCGGAACCGAAGAGTACATAGCACCGGAAATTATTACTGGGGCTGGCCATACTAGTGCAGTGGACTGGTGGGCTTTGGGTATCCTTCTATATGAGATGCTCTATGGCTACACACCCTTTAGAGGGAAGACAAGGCAAAAGACTTTCGCCAACATTCTTCATAAGGATCTTAAGTTTCCGAGAAAGAAGCTTCATTTCATAACATATCCGGTTGTTTTTCAGCATCCTCCCGAGCTCGAAGCGTCTCTTTTCCTGACCGTCGAACCCGAAAAAGATGCTAATAATAAAGCTCCAGATTTGGACATAAAAGCTCTTGACCTCAGTGTGTTCTGA 3285 48.22 MQQRSSTSSSFRATTDDHCSIIFSPAQEPQGRCSPETRSMDDSSGSILPVSDPSCRKRDHNSRYKFSERWIHLIPLILLLVLFILWWSSYPVNLVINDGGIKAVYASEFPEAPKYIDHVELAILGDAGMHIASSPLNLTSVGARDLRTPARNFVDRDEGVTTDKTILIRCIGVRDLMEPLDKPASNSSPLAPFPRDARGSLEVFNPSAAYSSHSINSISRANPTWPSWAEADSAKLAAKPASKTGDEITSWMAFKDSNAPPQPSSPVVQKTISAILSDKPPSEKPQSADEVGSAALRAAEWGLVLKTDTETGKPQGVGVRTSGGDEPNIKQENSRRGSNNSVRSSGDMSEEGGRERGFPRVSEDLKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVIGRNCRFLQGADTDPEDVAKIREGLQAGTSYCGRMQVEVSKHTEGFKDKMVRPNGLPESLIRYDARQKEMATSSVTELVQAVKRPRSLSESRPRALSESMNRRLFRKSGGGGGGGDNDGDRFETGMVRRKSESAAASTGRGSRRSMQRINEVPDKKPKKSSRRSFMGIMRKSQSNVDIIDVENGSDDDNDTDDDDRPDSVDDKVRQREMRKGIDLATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEFLQGPETDRATVKKIRDAIDNQTEVTVQLINYTKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGSQHVEPLSNCIPETTAKHGEKLIKETAENVDLAARELPDANLTPEDLWANHSKMVQPKPHRKDSPSWKAIQKILDSGEQIELKHFKPVKPLGSGDTGSVHLVELCGTDQFFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFLPALYASFQTKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRDNLPGSEARECSTTRQWTRCLDGFRLVMFDVLTSLDVNSAILQLLLPTTNEKKKQSRAQQAPVFMAEPMRASNSFVGTEEYIAPEIITGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHKDLKFPRKKLHFITYPVVFQHPPELEASLFLTVEPEKDANNKAPDLDIKALDLSVF 1094
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 6489886 6504077 + Cp4.1LG16g05670.1 Cpe16g00570 482945
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe16g00570 1094 MobiDBLite consensus disorder prediction 587 603 - -
Cpe16g00570 1094 Gene3D Phosphorylase Kinase; domain 1 791 924 - -
Cpe16g00570 1094 MobiDBLite consensus disorder prediction 572 586 - -
Cpe16g00570 1094 PANTHER PHOTOTROPIN-1 311 441 - -
Cpe16g00570 1094 ProSiteProfiles PAC domain profile. 679 733 IPR000700 -
Cpe16g00570 1094 MobiDBLite consensus disorder prediction 23 54 - -
Cpe16g00570 1094 CDD PAS 632 720 IPR000014 -
Cpe16g00570 1094 ProSitePatterns Protein kinases ATP-binding region signature. 812 835 IPR017441 GO:0005524
Cpe16g00570 1094 PANTHER FLIPPASE KINASE 1-RELATED 441 1047 - -
Cpe16g00570 1094 MobiDBLite consensus disorder prediction 553 567 - -
Cpe16g00570 1094 SMART serkin_6 806 1092 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe16g00570 1094 Pfam PAS domain 640 720 IPR000014 -
Cpe16g00570 1094 Pfam PAS domain 382 461 IPR000014 -
Cpe16g00570 1094 MobiDBLite consensus disorder prediction 493 507 - -
Cpe16g00570 1094 Gene3D Transferase(Phosphotransferase) domain 1 979 1046 - -
Cpe16g00570 1094 Gene3D PAS domain 375 452 - -
Cpe16g00570 1094 PANTHER FLIPPASE KINASE 1-RELATED 311 441 - -
Cpe16g00570 1094 Pfam Protein kinase domain 981 1039 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe16g00570 1094 Pfam Protein kinase domain 808 909 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe16g00570 1094 SUPERFAMILY PYP-like sensor domain (PAS domain) 382 441 IPR035965 -
Cpe16g00570 1094 MobiDBLite consensus disorder prediction 333 347 - -
Cpe16g00570 1094 ProSiteProfiles Protein kinase domain profile. 806 1094 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe16g00570 1094 PANTHER PHOTOTROPIN-1 441 1047 - -
Cpe16g00570 1094 SUPERFAMILY PYP-like sensor domain (PAS domain) 633 720 IPR035965 -
Cpe16g00570 1094 MobiDBLite consensus disorder prediction 30 50 - -
Cpe16g00570 1094 MobiDBLite consensus disorder prediction 305 359 - -
Cpe16g00570 1094 SUPERFAMILY Protein kinase-like (PK-like) 801 1044 IPR011009 -
Cpe16g00570 1094 CDD PAS 388 446 IPR000014 -
Cpe16g00570 1094 Gene3D PAS domain 605 758 - -
Cpe16g00570 1094 ProSiteProfiles PAS repeat profile. 361 432 IPR000014 -
Cpe16g00570 1094 MobiDBLite consensus disorder prediction 488 613 - -
Cpe16g00570 1094 SMART pac_2 682 724 IPR001610 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe05g01329 Cpe-Chr5:9339804 Cpe16g00570 Cpe-Chr16:6489886 0 dispersed
Cpe16g00373 Cpe-Chr16:5385784 Cpe16g00570 Cpe-Chr16:6489886 0 dispersed
Cpe16g00570 Cpe-Chr16:6489886 Cpe16g00796 Cpe-Chr16:7783762 1.94E-61 dispersed
Cpe16g00570 Cpe-Chr16:6489886 Cpe05g00878 Cpe-Chr5:5791431 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
62896 PF00069 Pkinase 2.70E-16 CL0016 Cpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe16g00570 K20715 - csv:101214662 1434.47