Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe16g00577 AAACTTCTACCGATGGATTGTAGAAGAAGATTTGGATTACTGTTCTGGATTTTGTTCATTTCGTTGCTGCCGTGCATTTCTTGTTTGTTTAATCCGGTAGATAATTATCTTATTGACTGTGGATCGCCGGCTAATGTATCCGTGGGTAATCGTGTTTTCATGGCCGATAATTTGGCCTCCAAGTTGCTTTCCACCCCGAAAGTCATTCTGGCTAATACGTCTTCAGTACCTGCCAGTTCTTCTAATGATTCGTCGCTGTTTGGAACGGCTAGAATCTTCACTGGATCATCAAAATTCAAGTTTCCAATTACGGCTGGAAGGCACTGGATCCGTCTCTATTTCTATCCATTTGTGTTTCCTGGCTTCAATATGAGTGCTGCAAATTTTAGTGTTTCGACCCAAAATTTTGTTCTGCTGCGAGATTTAGTTGCTGTGAAGAATCCTGTGGTCAAAGAGTTCTCTGTTAACGTAGCTTCAGATACTCTTGAAGTTATATTTACTCCTGTTAATGGCTCCTTTGCATATGTGAATGCCATTGAAGTTACTTCTGTTCCTGACATTCTCATTACTGATGAAGCCAGTTTGTTAGAACCGTCTGGTAAATTCGACGGGCTATCTTCTCTGGCATATGAGACAGTTGCTAGGGTTAATATGGGTGGGCCAAAGGTTTCTCCAGATAATGATCCTCTGGCACGGAGTTGGGTTCCTGATGAGAGCTTTCTAGTTAATAAGAATTCTGCTATAAGTTTCTCTAACATTGCAGCTGTTAAATACAGTGATGATGGGGCAGCTCCAGAGATTGCTCCAAATGTTGTCTATGGTACCCTAACCGAGATGAACTCAAAGGATGATCCAAGCAGTAATTTCAATGTGACATGGCGATTTAAAGTGGACCCGGAGTTTCAGTACCTTGTTCGGTTTCACTTTTGTGACATTGTGAGCAAAGCTCTACACCAACTTTATTTCAATGTTTACGTTGACTCGTGGTTGGTCGCTCGGGATTTAGATCTTAGTATTCCTCTTAACAATGCTCTGGCCACTCCATACTATATGGACGCTGTTACAGGATTGATCAAGAATGACATACTTCTTGTGAGCATTGGCCCAGCAAATTTAGCCAATGTGTATCCAAATGCTATTCTAAATGGTCTGGAAATCATGAAAATGAACAACTCAGTTGGCAGTCTTAGTGGGGAAGACTCTGTAATTAGTTTTCTGAACTCGACTTCTTCCAATAAGCACATTGGCGTGATTGTGGGCGTAACCGTTGGTGCATTTGTTGCAGCTATGTTGGTCGCTGTTCTGTTTATACTGAACAGACGAAGAAGAAAGGGAATGCATCAAGCTCCATCAAAAACATGGATTTCAATATCGACTGCTGGAGGAATGTCACACACTATGGGAAGTGTTTCCGCCACACGGTTTGACATTCCGGGTGTGGATGATCTCTCAGGAGTCTCCATGAGTAGGGTGTTCTCTCAGCTGGTGAAGTCTGAAGTTGAGCATCCTGGCAATGTCAATGACCATGGTGTGTCATTCTCTTCTGAATTTCCCTCTCCGTTTGGGAGCAGTGTCGAGGCGCTTTGTCGT 1590 42.77 KLLPMDCRRRFGLLFWILFISLLPCISCLFNPVDNYLIDCGSPANVSVGNRVFMADNLASKLLSTPKVILANTSSVPASSSNDSSLFGTARIFTGSSKFKFPITAGRHWIRLYFYPFVFPGFNMSAANFSVSTQNFVLLRDLVAVKNPVVKEFSVNVASDTLEVIFTPVNGSFAYVNAIEVTSVPDILITDEASLLEPSGKFDGLSSLAYETVARVNMGGPKVSPDNDPLARSWVPDESFLVNKNSAISFSNIAAVKYSDDGAAPEIAPNVVYGTLTEMNSKDDPSSNFNVTWRFKVDPEFQYLVRFHFCDIVSKALHQLYFNVYVDSWLVARDLDLSIPLNNALATPYYMDAVTGLIKNDILLVSIGPANLANVYPNAILNGLEIMKMNNSVGSLSGEDSVISFLNSTSSNKHIGVIVGVTVGAFVAAMLVAVLFILNRRRRKGMHQAPSKTWISISTAGGMSHTMGSVSATRFDIPGVDDLSGVSMSRVFSQLVKSEVEHPGNVNDHGVSFSSEFPSPFGSSVEALCR 530
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 6551378 6554387 - Cp4.1LG16g05840.1 Cpe16g00577 482952
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe16g00577 530 Gene3D - 35 184 - -
Cpe16g00577 530 Gene3D - 208 391 - -
Cpe16g00577 530 Pfam Malectin-like domain 38 389 IPR024788 -
Cpe16g00577 530 PANTHER OS03G0124300 PROTEIN-RELATED 14 455 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe06g00713 Cpe-Chr6:4432208 Cpe16g00577 Cpe-Chr16:6551378 9.43E-107 dispersed
Cpe09g00072 Cpe-Chr9:423972 Cpe16g00577 Cpe-Chr16:6551378 5.06E-65 dispersed
Cpe12g00709 Cpe-Chr12:6673911 Cpe16g00577 Cpe-Chr16:6551378 1.03E-80 dispersed
Cpe14g00089 Cpe-Chr14:483688 Cpe16g00577 Cpe-Chr16:6551378 9.72E-88 dispersed
Cpe16g00577 Cpe-Chr16:6551378 Cpe17g00606 Cpe-Chr17:5017980 1.83E-81 dispersed
Cpe01g01122 Cpe-Chr1:6640308 Cpe16g00577 Cpe-Chr16:6551378 2.22E-102 wgd
Cpe01g00217 Cpe-Chr1:1219283 Cpe16g00577 Cpe-Chr16:6551378 1.45E-117 wgd
Cpe16g00577 Cpe-Chr16:6551378 Cpe05g00886 Cpe-Chr5:5841927 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe16g00577 - - csv:101218488 756.903