Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe16g00609 ATGGGTAACGGGATTGGGAAGCTCGGCGGTTGCTTTGCCGGAATCGACGACGGTAAGCGGCGGCCGGATATTTCCGTTCTGATATCGAATCCACTAGATGAAGGATTAGGGCACTCGTTCTGCTATGTCCGGCCGGATCCCTCGAGGCTTTCGTCGTCAAAAGTTCATTCCGACGAAACCACCACTTTCCGATCAATTTCCGGCGCCGCTGTGAGTGCCAATACATCGACGCCTCTTTCTACTTCTCTTCTTGATCTGTATTCATACAGTAGCATTGATCGAGCGCCGGCTTTTGAAAGCTCGAATTCTTTCGCTTCAATCCCTTTGCAACCAATCCCTAGAAATATGATCAATTCGGGTCCAATTTCGGGTCCGATTTCGGGGCATTTGGAAAGAGGGTTTTTATCGGGTCCAATTGAGCGAGGGTTTATGTCGGGTCCATTGGATAAAGGGATTTTTTCGGGTCCGCTCGATAATTCTTCATCCACTGAATTTCAGAGGAGTTTTTCTCATGGAGGCGGGTTTAATTCCAGATCTAGATCCAGAAAAAGCCGGTTGATTCGGATTCTTAGAAGCGCAATTCCGAAATCGATTTATCGAGGGAAGAATTCCATTGTGGCTCCGATTAAAGCGGTGAAAGAACCCGATTGGATCGTCATGCCCGAGAAACATAATGAGAATTTGACGGTGAGTAGTATGAATTTCAGTAGCGAGGGGAGTTTGGAAGATGATGAATCAATGCAGAGCCAAAATCTGCAGTGGGCGCAAGGAAAAGCAGGGGAAGATCGAGTTCATGTCGTAGTTTCTGAAGAACATGGATGGGTTTTCGTTGGGATTTATGACGGATTTAACGGTCCTGATGCTCCTGATTACCTCTTATCGAATTTATACTCCTCTGTTCATAAAGAGCTCAAAGGTTTGTTATGGGACGAAAACCTCGATTTGGCTGGCGTCCCTGCTCCGGTCACTTCGCCGGTTAATCGGACGGGTGATGCTTGTTCTCGGTGTGTAGAACAAGAGAATCATCCTTCAAGAAGAAGAAAAGGTAAGAATTCAAGAGGCAAATTTAGAGGAGCGGCTGAGAAGTGGGAGGATAATCAGCGGCGGTGGAAATGCGAATGGGATCGGGAAAGATTAGAACTCGATCGGAGGTTAAAGGAGCAGTTGAATCGATCTGAATCGAACGGATCGAGATCGATTAATCATTCGGATGTTCTTAAAGCTCTGTCCCAGGCATTGAAGAACACAGAAGAGGCCTATTTGGATATTGCAGACAAGGTGCTCGATGAAAATCCTGAACTAGCTTTGATGGGCTCTTGTGTTCTTGTGATGCTTATGAAGGGAGATGATGTTTATGTGATGAATGTCGGCGACAGTCGAGCTGTTTTAGCGCAGAAGGCCGATCCCGATTACTGGCTCGGGATGATTCGACAGGATTTGGAGAGGATTATTCGACGAATAAAAAACGAACACCCTGATGATGCCGGTGCCGTGATGAACGACCGTGTGAAAGGCTCATTGAAGGTTACTCGGGCGTTCGGTGCTGGTTTCCTCAAACAGTACTTCACAAACGAAGAAGCAGTTTCCGAGGTCGAGCTTTTCATCACGTTACAACCCGAAGGCGACCCGGCTCAACATCTGATTGAATTACTGCTGTTTCGAGCTGCAAAGCGAGCTGGTATGGATTTCCACGAGCTGCTCGAAATACCGCAGGGGGACCGGAGGAAGTACCACGACGATGTGTCGATCATTGTGATTTCGTTAGAAGGGAGGATCTGGAGATCCTGTGTATAA 1794 47.32 MGNGIGKLGGCFAGIDDGKRRPDISVLISNPLDEGLGHSFCYVRPDPSRLSSSKVHSDETTTFRSISGAAVSANTSTPLSTSLLDLYSYSSIDRAPAFESSNSFASIPLQPIPRNMINSGPISGPISGHLERGFLSGPIERGFMSGPLDKGIFSGPLDNSSSTEFQRSFSHGGGFNSRSRSRKSRLIRILRSAIPKSIYRGKNSIVAPIKAVKEPDWIVMPEKHNENLTVSSMNFSSEGSLEDDESMQSQNLQWAQGKAGEDRVHVVVSEEHGWVFVGIYDGFNGPDAPDYLLSNLYSSVHKELKGLLWDENLDLAGVPAPVTSPVNRTGDACSRCVEQENHPSRRRKGKNSRGKFRGAAEKWEDNQRRWKCEWDRERLELDRRLKEQLNRSESNGSRSINHSDVLKALSQALKNTEEAYLDIADKVLDENPELALMGSCVLVMLMKGDDVYVMNVGDSRAVLAQKADPDYWLGMIRQDLERIIRRIKNEHPDDAGAVMNDRVKGSLKVTRAFGAGFLKQYFTNEEAVSEVELFITLQPEGDPAQHLIELLLFRAAKRAGMDFHELLEIPQGDRRKYHDDVSIIVISLEGRIWRSCV 597
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 6698901 6701825 - Cp4.1LG16g06030.1 Cpe16g00609 482984
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe16g00609 597 CDD PP2Cc 381 588 IPR001932 -
Cpe16g00609 597 PANTHER PROTEIN PHOSPHATASE 2C 12 477 IPR015655 GO:0004722|GO:0006470
Cpe16g00609 597 PANTHER PROTEIN PHOSPHATASE 2C 482 520 IPR015655 GO:0004722|GO:0006470
Cpe16g00609 597 Coils Coil 406 426 - -
Cpe16g00609 597 SUPERFAMILY PP2C-like 258 589 IPR036457 -
Cpe16g00609 597 SMART PP2C_4 245 586 IPR001932 -
Cpe16g00609 597 MobiDBLite consensus disorder prediction 235 254 - -
Cpe16g00609 597 Pfam Protein phosphatase 2C 398 529 IPR001932 -
Cpe16g00609 597 PANTHER - 518 597 - -
Cpe16g00609 597 Gene3D - 220 593 IPR036457 -
Cpe16g00609 597 ProSiteProfiles PPM-type phosphatase domain profile. 244 588 IPR001932 -
Cpe16g00609 597 MobiDBLite consensus disorder prediction 337 359 - -
Cpe16g00609 597 PANTHER PROTEIN PHOSPHATASE 2C 518 597 IPR015655 GO:0004722|GO:0006470
Cpe16g00609 597 PANTHER - 482 520 - -
Cpe16g00609 597 PANTHER - 12 477 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe16g00609 Cpe-Chr16:6698901 Cpe19g00880 Cpe-Chr19:6451702 1.47E-19 dispersed
Cpe10g00887 Cpe-Chr10:4986613 Cpe16g00609 Cpe-Chr16:6698901 3.75E-172 wgd
Cpe16g00609 Cpe-Chr16:6698901 Cpe19g00351 Cpe-Chr19:3077215 2.13E-175 wgd
Cpe16g00609 Cpe-Chr16:6698901 Cpe05g00920 Cpe-Chr5:6041286 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe16g00609 - - cmax:111484437 1063.52