Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe16g00653 ATGCCAGCCATTACTCGAGGAAGTCACTGTAAGATTGAGAATGGAACGAAATTGGATGATGTCATGGTTGCGAGAGTGACTGATGCATCTGCTATGGAGAAAACTCCTCCCAAGCGGAAACTGAGATCTGGTGATGCGCAGAGACAACAAAGCCCTGTCTCTGAACCGATGAATTGGAAATCGCCTCGTCGGTGTCTCAATTCGAGTCCAAAGAGCGTTCCACATAGCGATGGGAAAACGTTTATTGATGGCTTTCCTAAATTACATATGTCGCCGATAAAATGCTTGTTCAAGAACCCCAGTGTCAAACCAGATTGGAATCCTAAAGATACCCAACATATAAAAACAGCAAAGGAAGCATTGCACGTATCGACAGCTCCAACTACAGTCATGTGCCGCGAGGATGAACAGAGCAGAATCTTAAATTTCTGCAAGGCTTGTGTGGAGAAAGAAAAAGCTGGTAGTTTGTATGTTTGCGGGTGTCCAGGAACTGGCAAATCTTTGTCCATGGAAAAAGTGAAAGAGCAGTTGGCTGATTGGGTGAAAGAGTCAGGTCTTCAGCTGCCAGACATTTTGTCCATAAACTGCACTTCGTTAGCTAAGACGTCGGACATTTTCACTAAGATAATGGGGGAAGCCCAACCGCAAAAGAAAAGGAATGGCTCTTTAACACCCTTGCAACATCTTCAAAGCTCGTACTCCCAAAAGGCAGAGTCATCTTGCACGAAAATGATGTTGATAATTGCTGATGAATTGGATTATTTAATTACAAAGGACAAGGCAGTGCTACATAATCTATTCATGCTTACAACTTTCCCATTTTCAAGATGCATTTTGATAGGAATTGCAAATGCTATTGATTTAGCAGATCGTTTTCTTCCAAGACTTCAGGCATTGAATTGCAAACCTCCGGTCATAACTTATAGGGCTTATTCCAAGGAACAGATACTCAAGATTCTTCATCAACGGTTAATTGTGCTTCCTTTCGTTGTCTTTCAGCCGCAAGCTTTGGAGCTTTGTGCTAGAAAAGTTGCAGCTGTATCTGGAGATATGAGAAAAGCTCTTTGTGTTTGCAGAAACGCCATTGAATTGTTAGAGGCGGAACATAAAGCATCCTCTAAGGAGGAAGACCATATAGCATGTGATGCTTCAGCACCTGAGATTGTTAAAAGTCGGGAGTCTCAGATTGTGAGGTTGGACCATATGGCTGTTGCCTTATCCAAGACTTTTAAATCACCAGCAGTGGAAACCATACAATCTCTTCCTCAGCATCAACAGATTATTTTATGCTCTGTTGTGAAACTCGTTCGTGGAGGAAAGAAGGATACAACCATAGGAGAGGTAAACAAATCATACGTAGACATCTGCAAATCAACACTAATTCCGCCAGTAGGAACCTTAGAACTTTCAAACATGTTCACAGTGCTAAACGACCAGGGGCTCCTCAAACTCGGCCAGTCTCGAGACGATAAGACGAGGCGGGTGTTGCTGAAAGTCGACGAAGCTGATGTCATGTTCGCATTACAGGGAATACGGTTCTTTCGAAATTGCCTTACAGTAAATTAG 1566 42.85 MPAITRGSHCKIENGTKLDDVMVARVTDASAMEKTPPKRKLRSGDAQRQQSPVSEPMNWKSPRRCLNSSPKSVPHSDGKTFIDGFPKLHMSPIKCLFKNPSVKPDWNPKDTQHIKTAKEALHVSTAPTTVMCREDEQSRILNFCKACVEKEKAGSLYVCGCPGTGKSLSMEKVKEQLADWVKESGLQLPDILSINCTSLAKTSDIFTKIMGEAQPQKKRNGSLTPLQHLQSSYSQKAESSCTKMMLIIADELDYLITKDKAVLHNLFMLTTFPFSRCILIGIANAIDLADRFLPRLQALNCKPPVITYRAYSKEQILKILHQRLIVLPFVVFQPQALELCARKVAAVSGDMRKALCVCRNAIELLEAEHKASSKEEDHIACDASAPEIVKSRESQIVRLDHMAVALSKTFKSPAVETIQSLPQHQQIILCSVVKLVRGGKKDTTIGEVNKSYVDICKSTLIPPVGTLELSNMFTVLNDQGLLKLGQSRDDKTRRVLLKVDEADVMFALQGIRFFRNCLTVN 521
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 6903047 6907484 + Cp4.1LG16g06390.1 Cpe16g00653 483028
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe16g00653 521 PANTHER CELL DIVISION CONTROL PROTEIN 6 HOMOLOG 27 518 - -
Cpe16g00653 521 SUPERFAMILY Winged helix DNA-binding domain 415 517 IPR036390 -
Cpe16g00653 521 Gene3D - 419 509 IPR036388 -
Cpe16g00653 521 PANTHER CELL DIVISION CONTROL PROTEIN 6-RELATED 27 518 - -
Cpe16g00653 521 Pfam AAA lid domain 333 370 IPR041083 -
Cpe16g00653 521 Pfam CDC6, C terminal winged helix domain 429 507 IPR015163 -
Cpe16g00653 521 Gene3D - 300 418 - -
Cpe16g00653 521 SMART Cdc6_C_2 429 508 IPR015163 -
Cpe16g00653 521 CDD AAA 136 296 - -
Cpe16g00653 521 PIRSF Cdc6 5 521 IPR016314 GO:0006270|GO:0051301
Cpe16g00653 521 CDD Cdc6_C 422 504 IPR015163 -
Cpe16g00653 521 Gene3D - 110 299 IPR027417 -
Cpe16g00653 521 Pfam AAA domain 151 271 IPR003593 -
Cpe16g00653 521 MobiDBLite consensus disorder prediction 28 78 - -
Cpe16g00653 521 MobiDBLite consensus disorder prediction 46 75 - -
Cpe16g00653 521 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 118 370 IPR027417 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe06g01023 Cpe-Chr6:10624499 Cpe16g00653 Cpe-Chr16:6903047 3.66E-30 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe16g00653 K02213 - csv:101205741 815.453