Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe16g00679 ATGGATAGATTGAGCGCCGAGGTTGGAGGATTGGAAGCTTCATTGCTTCGAATGAAAGATGCTACTCAGAAGGCGGTGTGTGTTTCGGATCTTTTAGTGGATGCTGTGAATGGTGGAGTTCAAGAATCGGCATTAGCGATTACGATTGCTCGATTCGCTAAGCAGATCGATCAATGCCTCGCCGTCACTCACGCTCTGAACACCGACGTTAAGCTGACTCCCAACTTTTACAACAAAGTCTGCCCCAAGGCCTTGTCCACCATTAGATCCGTCGTCTTGAACGCCATCAAACATGAGCCTCGTATGGGAGCTTCCCTCTTACGTCTCCATTTCCACGACTGCTTCGTCAATGGTTGCGATGGGTCGGTCTTATTGGACGATATTGGTAACTTCGTTGGAGAAAAGACTGCCTTTCCTAATGTAAACTCGATCAGAGGATTTGAAGTCGTCGACCAGATTAAACAAAAAGTCAATAAGGCTTGTAAAGGCAATGTTGTGTCTTGTGCTGATATCTTAGCTGTTGCTGCTCGTGATTCTGTTGCTATTGTAAGTATAAAACTATTAAATCGCTCAAAAATCCAAAAAATATTATTAACGATCCAAAATGTTGAACTATGTTTTGAACAGCTTGGTGGGCCAAACTACAAAGTACTATTAGGAAGAAGAGATGCAAGAACAGCAAGCGTAAACGATGCCAACAGAAGCCTCCCTCCGCCATTTTTCAGTTTCTCACAGCTTCTATCCAGCTTCCAATCTCAAGGCCTCGACCTCAAGGACCTCGTCCTCTTATCGGCCGGCCACACCCTCGGCAAAGCTCGGTGCGCCACCTTCCGAACAAGGATATACAACGACACCAACATCGACCGGAAATTCGCAGCGTCGCTGAAGGCAATTTGCCCACCAAGCGGCAAGGATAACAATCTGATGGGTCTTGACAAGACTTCCAATTTCTTTGACAATGCCTACTTCAAAGCTTTGTTGAATAAGAAGGGTCTTCTCCATTCCGACCAGGAACTGTTCGGCGGCGGGAGCCAGGAGAGTGATGAATTGGTGTCGTATTATAGCAGATATCCATACTCCTTTAGAGATGACTTTGGTTCTTCCATGATCAAAATGGGCAATATAAAGCCACTTACAGGAAGTTACGGAGAAATCAGACAAAATTGTCGGTTTGTCAACTAA 1182 45.35 MDRLSAEVGGLEASLLRMKDATQKAVCVSDLLVDAVNGGVQESALAITIARFAKQIDQCLAVTHALNTDVKLTPNFYNKVCPKALSTIRSVVLNAIKHEPRMGASLLRLHFHDCFVNGCDGSVLLDDIGNFVGEKTAFPNVNSIRGFEVVDQIKQKVNKACKGNVVSCADILAVAARDSVAIVSIKLLNRSKIQKILLTIQNVELCFEQLGGPNYKVLLGRRDARTASVNDANRSLPPPFFSFSQLLSSFQSQGLDLKDLVLLSAGHTLGKARCATFRTRIYNDTNIDRKFAASLKAICPPSGKDNNLMGLDKTSNFFDNAYFKALLNKKGLLHSDQELFGGGSQESDELVSYYSRYPYSFRDDFGSSMIKMGNIKPLTGSYGEIRQNCRFVN 393
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 7069904 7077360 - Cp4.1LG16g06810.1 Cpe16g00679 483054
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe16g00679 393 PANTHER PEROXIDASE 72-RELATED 70 392 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cpe16g00679 393 Gene3D - 75 183 - -
Cpe16g00679 393 CDD secretory_peroxidase 71 392 IPR033905 GO:0004601|GO:0042744
Cpe16g00679 393 SUPERFAMILY Heme-dependent peroxidases 72 393 IPR010255 GO:0004601|GO:0006979|GO:0020037
Cpe16g00679 393 ProSiteProfiles Plant heme peroxidase family profile. 71 393 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cpe16g00679 393 ProSitePatterns Peroxidases active site signature. 103 114 IPR019794 GO:0004601
Cpe16g00679 393 Pfam Peroxidase 89 343 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cpe16g00679 393 PRINTS Plant peroxidase signature 105 125 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cpe16g00679 393 PRINTS Plant peroxidase signature 81 100 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cpe16g00679 393 PRINTS Plant peroxidase signature 309 324 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cpe16g00679 393 PRINTS Plant peroxidase signature 325 342 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cpe16g00679 393 PRINTS Plant peroxidase signature 367 380 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cpe16g00679 393 PRINTS Plant peroxidase signature 211 226 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cpe16g00679 393 PRINTS Plant peroxidase signature 258 270 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cpe16g00679 393 Gene3D - 209 393 - -
Cpe16g00679 393 PRINTS Haem peroxidase superfamily signature 103 117 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cpe16g00679 393 PRINTS Haem peroxidase superfamily signature 166 183 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cpe16g00679 393 PRINTS Haem peroxidase superfamily signature 311 326 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cpe16g00679 393 PRINTS Haem peroxidase superfamily signature 259 274 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cpe16g00679 393 ProSitePatterns Peroxidases proximal heme-ligand signature. 259 269 IPR019793 -
Cpe16g00679 393 Gene3D Peroxidase, domain 2 237 372 - -
Cpe16g00679 393 PANTHER CATIONIC PEROXIDASE 70 392 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe01g00681 Cpe-Chr1:3971568 Cpe16g00679 Cpe-Chr16:7069904 9.54E-14 dispersed
Cpe01g00746 Cpe-Chr1:4332017 Cpe16g00679 Cpe-Chr16:7069904 4.60E-61 dispersed
Cpe10g00426 Cpe-Chr10:2482905 Cpe16g00679 Cpe-Chr16:7069904 3.59E-88 dispersed
Cpe16g00679 Cpe-Chr16:7069904 Cpe04g00738 Cpe-Chr4:7230845 1.06E-61 dispersed
Cpe16g00679 Cpe-Chr16:7069904 Cpe16g00680 Cpe-Chr16:7077887 1.55E-18 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe16g00679 K00430 - csv:101204979 457.218