Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe16g00683 ATGGAAAATAAGGCTAGTGTGATGGTTCAAAGCTACGAATTAGGAAGATTGCTAGGCCAAGGAACCTTTGCTAAGGTATATTATGCGCGGAATACAGTAAACAACCAAAGCGTGGCCATTAAGGTGATCGATAAAGGAAAGATTACGAAGACTATGCTAATTGATCGGATTAAGCGTGAAATATCTATTATGAGACTTGTTAGACATCCTAATATTGTATATCTGTATGAGGTTATGGCTACCAAGACTAAGATTTACTTTGTTTTGGAATATGCAAAGGGTGGTGAGCTCTTTGACAAAGTTGCTAAAGGGAGGCTGAATGAGGATGTTGCTTGGAAATACTTTTATCAATTAATCCATGCTATTGATTTTTGTCACAGTAGGGGAGTATATCACCGTGACATAAAGCCTGAGAACTTACTGCTTGATGAAAATGAAAATCTTAAGGTGTCTGATTTTGGTCTAAGTGCTCTAGTCGAGTCCGAGCGTCGAGATGGGTTGCTACACACGATTTGTGGCACACCGGCTTATGTTGCCCCTGAAGTTATCAGTAGGAAGGGCTATGATGGTGCAAAAGCTGATATCTGGTCTTGTGGAGTCGTTTTGTTTGTCTTATTGGCAGGTTATCTCCCGTTCCACGACTCGAATTTAATGGAGATGTATAGGAAGATTGAGAAAGCAGACTATAAATGTCCTAGTTGGTTCCCTCGTGAAATGCGGAGGCTGCTAAGTCGGATGCTTGATCCAAACCCCGTTACGAGGACTTCCATAGCAATGATAAGACAGAGTTCTTGGTTCAAAAAAGGATTGAGATCAATGAATGTAAGAAGTGGAACAAAAGATGATGCTATAGCGGCTGTTTCAGATGGAAATCAAGAGATGGATAGACCTCCAACTTTGAATGCTTTCGACCTCGTCTCCCTTTCGACAGGGTTCGACCTATCGAGTTTATTTGAAGACGATTCAAGGAAGAAAGAAACGTTGTTTACTTGTAGAAAACCGGCCTCTGTTCTTCTCTCGAAACTAGAAGAAATTGCTAAACTTGTTCGGTTTCGAGTGCAGAAGAAAGAAGCAGGCCTACTGAGGCTTGAGGCACTAACAGAGGGGAAAAAAGGGGTATTGTCCATTGATACAGAGATCTATGAGGTTACTTCATCTTTTTATTTGGTGGAAATGAAAAAATCAAATGGAGACACATTGGAATATCAGAAGATATTGAAAGAGGACATAAGGCCAGCTCTACAGGATATTGTATGGGTTTGGCGAGGTGAGCACGAGCAGCAGCAGCAACGAAAGCCTTGGCCTCGACCTCGGCCAAATGACAGAAGCTCAGTATAA 1338 41.63 MENKASVMVQSYELGRLLGQGTFAKVYYARNTVNNQSVAIKVIDKGKITKTMLIDRIKREISIMRLVRHPNIVYLYEVMATKTKIYFVLEYAKGGELFDKVAKGRLNEDVAWKYFYQLIHAIDFCHSRGVYHRDIKPENLLLDENENLKVSDFGLSALVESERRDGLLHTICGTPAYVAPEVISRKGYDGAKADIWSCGVVLFVLLAGYLPFHDSNLMEMYRKIEKADYKCPSWFPREMRRLLSRMLDPNPVTRTSIAMIRQSSWFKKGLRSMNVRSGTKDDAIAAVSDGNQEMDRPPTLNAFDLVSLSTGFDLSSLFEDDSRKKETLFTCRKPASVLLSKLEEIAKLVRFRVQKKEAGLLRLEALTEGKKGVLSIDTEIYEVTSSFYLVEMKKSNGDTLEYQKILKEDIRPALQDIVWVWRGEHEQQQQRKPWPRPRPNDRSSV 445
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 7088889 7090226 + Cp4.1LG16g06740.1 Cpe16g00683 483058
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe16g00683 445 Pfam NAF domain 297 355 IPR004041 GO:0007165
Cpe16g00683 445 Gene3D Kinase associated domain 1, KA1 299 420 - -
Cpe16g00683 445 MobiDBLite consensus disorder prediction 426 445 - -
Cpe16g00683 445 PANTHER CBL-INTERACTING SERINE/THREONINE-PROTEIN KINASE 10 2 431 - -
Cpe16g00683 445 Pfam Protein kinase domain 12 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe16g00683 445 CDD CIPK_C 301 415 - -
Cpe16g00683 445 SMART serkin_6 12 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe16g00683 445 ProSiteProfiles NAF domain profile. 295 319 IPR018451 GO:0007165
Cpe16g00683 445 SUPERFAMILY Protein kinase-like (PK-like) 9 267 IPR011009 -
Cpe16g00683 445 ProSitePatterns Protein kinases ATP-binding region signature. 18 41 IPR017441 GO:0005524
Cpe16g00683 445 Gene3D Transferase(Phosphotransferase) domain 1 3 298 - -
Cpe16g00683 445 ProSitePatterns Serine/Threonine protein kinases active-site signature. 130 142 IPR008271 GO:0004672|GO:0006468
Cpe16g00683 445 ProSiteProfiles Protein kinase domain profile. 12 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe16g00683 445 PANTHER - 2 431 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe05g00997 Cpe16g00683 CCT
Cpe05g00997 Cpe16g00683 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe16g00683 Cpe-Chr16:7088889 Cpe19g00146 Cpe-Chr19:1152168 0 dispersed
Cpe16g00683 Cpe-Chr16:7088889 Cpe05g00997 Cpe-Chr5:6525607 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
62904 PF00069 Pkinase 2.60E-74 CL0016 Cpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe16g00683 - - csv:101206404 743.036