Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe16g00684 ATGCCGGAGATCGAACCCTCTCCCCCCGATAACGATGCCTTATTTGGCAGGTACGAGCTCGGCAAGCTCCTTGGCTGCGGCGCCTTTGCCAAGGTCTACCATGCCCGTGACCTCCATTCCGGCCAAAGCGTCGCCATCAAAGTCATCAACAAGAAGAAGATCAACGGCTCAATCCTAATGCTCAACATCAAGCGGGAGATCACCATCATGCGCCATCTCCGCCACCCTCACATCGTCAAACTCCTTGAGATCCTCGCTACCAAATCCAAGATCTACTTTGTTATGGAGTTCGTCAGAGGCGGTGAGCTCTTCGCTAAGATCGCCATTGGCAGGTTCAGCGAGAATCTCAGCCGGAAATTCTTCCGCCAGTTGATCTCCGCCGTTGGATTCTGTCACGCGCGTGGGATCTACCACCGCGATTTGAAGCCGGAGAATCTCCTCGTCGATGAGAATGCGAATCTCAAGGTTTCCGACTTCGGTCTCAGTGCGGTTACGGATCAGATCCGCGCCGATGGCCTTTTGCACACTCTCTGTGGAACTCCGGCGTATGTCGCGCCGGAGATTTTATCGAAGAAGGGATACGACGGTGCGAAAATCGATGTGTGGTCATGTGGTGTGACTCTCTTCGTCTTGAACGCCGGTTACCTTCCGTTCAACGATTCGAATCTAATGGTGTTGTATAAGAAGATTTACAGGGGGGATTATCGGTGCCCTAAATGGATGTCGCCTGATCTCCAGAGGTTTCTGTCACGACTTCTCGATACGAATCCCCAAACCAGGATCACCATCAATGAGATTCTGAATGATCCGTGGTTCACAAATGGAGGAGATACAGACATCAATTTCTACCATGATTACGAGGTCAAATCGGAAGCGAAGGTCGAATCTCCATCGAAGAACTTAAACGCTTTCGACATTATATCGTTCTCGTCGGGATTAGATCTGTCTGGTTTGTTTGACGATTTGCAATACGCAGTGGAGGACAGTGAGCGATTCGTACTGGCGGAGTCGCCGGAAAAGATCCTGGAAGAGGTGGAGGAATTCGCTAGGTCTGAGAATTTGAAGGTTAAGAAACAGAGAGAATTTTTAGTTGAATTGTTTGGACAGAATCATAATTTTTCTATCCGGATAGAAATTTTCCGGTTGATCAACGGATTGGCGGTGGTGGAAGTGAGAAGAAGAGGTGTCGATGCAGTATCATATAAGCAACTGTTGAAGAAAAAGCTGAAATGTCATCTCATCGACAACGTAGCGTCGACGTCCCGATAG 1269 49.09 MPEIEPSPPDNDALFGRYELGKLLGCGAFAKVYHARDLHSGQSVAIKVINKKKINGSILMLNIKREITIMRHLRHPHIVKLLEILATKSKIYFVMEFVRGGELFAKIAIGRFSENLSRKFFRQLISAVGFCHARGIYHRDLKPENLLVDENANLKVSDFGLSAVTDQIRADGLLHTLCGTPAYVAPEILSKKGYDGAKIDVWSCGVTLFVLNAGYLPFNDSNLMVLYKKIYRGDYRCPKWMSPDLQRFLSRLLDTNPQTRITINEILNDPWFTNGGDTDINFYHDYEVKSEAKVESPSKNLNAFDIISFSSGLDLSGLFDDLQYAVEDSERFVLAESPEKILEEVEEFARSENLKVKKQREFLVELFGQNHNFSIRIEIFRLINGLAVVEVRRRGVDAVSYKQLLKKKLKCHLIDNVASTSR 422
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 7092122 7093390 - Cp4.1LG16g06840.1 Cpe16g00684 483059
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe16g00684 422 ProSiteProfiles NAF domain profile. 296 320 IPR018451 GO:0007165
Cpe16g00684 422 Pfam Protein kinase domain 18 272 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe16g00684 422 Gene3D Transferase(Phosphotransferase) domain 1 99 277 - -
Cpe16g00684 422 Gene3D Kinase associated domain 1, KA1 297 418 - -
Cpe16g00684 422 ProSitePatterns Serine/Threonine protein kinases active-site signature. 136 148 IPR008271 GO:0004672|GO:0006468
Cpe16g00684 422 ProSiteProfiles Protein kinase domain profile. 18 272 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe16g00684 422 Pfam NAF domain 299 358 IPR004041 GO:0007165
Cpe16g00684 422 SUPERFAMILY Protein kinase-like (PK-like) 15 281 IPR011009 -
Cpe16g00684 422 PANTHER - 9 417 - -
Cpe16g00684 422 PANTHER CBL-INTERACTING SERINE/THREONINE-PROTEIN KINASE 14 9 417 - -
Cpe16g00684 422 CDD CIPK_C 302 401 - -
Cpe16g00684 422 SMART serkin_6 18 272 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe16g00684 422 Gene3D Phosphorylase Kinase; domain 1 9 97 - -
Cpe16g00684 422 ProSitePatterns Protein kinases ATP-binding region signature. 24 47 IPR017441 GO:0005524
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe05g00998 Cpe16g00684 CCT
Cpe05g00998 Cpe16g00684 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe10g00995 Cpe-Chr10:5660936 Cpe16g00684 Cpe-Chr16:7092122 5.25E-178 dispersed
Cpe16g00684 Cpe-Chr16:7092122 Cpe19g00148 Cpe-Chr19:1180440 0 dispersed
Cpe16g00684 Cpe-Chr16:7092122 Cpe05g00998 Cpe-Chr5:6530352 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
62905 PF00069 Pkinase 2.30E-70 CL0016 Cpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe16g00684 - K12761 cmos:111448499 762.296