Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe16g00685 ATGCCCTTGATTTGTTCGTCGAACATGTTGAAGAACACTCGTAACAGCCCTGATTGGAACTCGGAATTTGGGTACGTTGAAACCGATCCGACATGTCGTTACGGCCGTTTTGAAGAAGTTTTGGGAAAAGGGGCTATGAAGACAGTGTACAAAGCCATTGATGAGTTTCTTGGAATTGAAGTGGCGTGGAGTCAGGTGAAACTCAATGAAGTTCTCCGGTCACCGGAGGATTTGCAGCGGTTGTATTCGGAAGTTCATCTACTTAGTACGCTTAAGCATGAATCGATCATGCGATTCTACACCTCTTGGATCGATGTCGAACGCAAAACAGCCATTAAGAGCTGGGCGCGCCAGATTCTACGCGGGCTCGTTTATTTGCATGAACACGACCCTCCGATAATACACAGAGATTTGAAGTGCGATAATATCTTTGTAAACGGCCATCTTGGACAAGTCAAGATTGGTGACTTGGGGCTTGCAGCTATACTCCATGGTTCCAGATCTGCTCACAGTGTTATAGCTCATCGTACTCTCCGCTCCATCTCCTCGTCGTCCCGAGCAACAACTTTGAGTCTCATCACCTCTCCCAAAACAAATCAAAACATATCAAATGGTTTAAGTTGGTTCCCAGATGAAATGCTCGACGATAGCAGCTCACAGTGCTCATCAGCGTCGGGAACATACTCGAACTTGAATTACGTCAGCAGCGACGAGTACGAGACCGGTATGAGTTCAGTCCGGGTAGATCAACATAACAACATCAATAAGATTCAAAACTCCTCAAGATTTTGTCCTGTTGAGAGCCGCAAAAACAAGGATTTCATGGCTGGGCTTCTATACAAGCAGAGCCAATGTGCGGTAGCAGGGTCATCTCAAGGAGCTACCTCTGGTCGCAAAGACAAGAGGGGAACGGACGGCCGGACATTAACAAGGAACAGGTCACTAGTAGATGTACATAGCCAATTGCTGCATCGTTCGTTGGTCGAGGAAGTGAATCGAAGACGGTTATTCAAGACGGTTGGAGCGGTCGAAAGCATCGGGTTTCAAGCACCTTGTGAGGTTTCTTCCAGCAAAAGGGTTTCGAGTAGGCTACCGATCGGGAACCGAAGTAGCGATGTAGCGAGAACAAGGAGAAACGACGATATTAGGTGGGAAGTTGTTGGAAGGAGAACATGA 1176 47.19 MPLICSSNMLKNTRNSPDWNSEFGYVETDPTCRYGRFEEVLGKGAMKTVYKAIDEFLGIEVAWSQVKLNEVLRSPEDLQRLYSEVHLLSTLKHESIMRFYTSWIDVERKTAIKSWARQILRGLVYLHEHDPPIIHRDLKCDNIFVNGHLGQVKIGDLGLAAILHGSRSAHSVIAHRTLRSISSSSRATTLSLITSPKTNQNISNGLSWFPDEMLDDSSSQCSSASGTYSNLNYVSSDEYETGMSSVRVDQHNNINKIQNSSRFCPVESRKNKDFMAGLLYKQSQCAVAGSSQGATSGRKDKRGTDGRTLTRNRSLVDVHSQLLHRSLVEEVNRRRLFKTVGAVESIGFQAPCEVSSSKRVSSRLPIGNRSSDVARTRRNDDIRWEVVGRRT 391
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 7098204 7102477 - Cp4.1LG16g06830.1 Cpe16g00685 483060
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe16g00685 391 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 111 174 - -
Cpe16g00685 391 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK4-RELATED 19 110 - -
Cpe16g00685 391 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK4-RELATED 180 371 - -
Cpe16g00685 391 Gene3D Phosphorylase Kinase; domain 1 19 110 - -
Cpe16g00685 391 SMART serkin_6 35 346 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe16g00685 391 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 180 371 - -
Cpe16g00685 391 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK4-RELATED 111 174 - -
Cpe16g00685 391 ProSitePatterns Serine/Threonine protein kinases active-site signature. 133 145 IPR008271 GO:0004672|GO:0006468
Cpe16g00685 391 Gene3D Transferase(Phosphotransferase) domain 1 111 229 - -
Cpe16g00685 391 SUPERFAMILY Protein kinase-like (PK-like) 30 168 IPR011009 -
Cpe16g00685 391 ProSiteProfiles Protein kinase domain profile. 35 346 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe16g00685 391 Pfam Protein kinase domain 110 174 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe16g00685 391 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 19 110 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe05g01001 Cpe16g00685 CCT
Cpe05g01001 Cpe16g00685 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe16g00685 Cpe-Chr16:7098204 Cpe09g01001 Cpe-Chr9:8877785 7.04E-69 dispersed
Cpe16g00685 Cpe-Chr16:7098204 Cpe05g01001 Cpe-Chr5:6540824 7.59E-161 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
62906 PF00069 Pkinase 5.50E-15 CL0016 Cpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe16g00685 K08867 - csv:101203757 366.696