Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe16g00688 ATGACAGATCCAGCGCCATCGAACCCTATCCACAGTCCAAATTCCAATCAAATTCCTCCACTCAATGCTGCACTGCCGCCGGCGGCGGCTCACAAACCGCCGCCGGTGGCGAATGCGACGGCCTCCTCGTCGATGTTTGCGAATTCGAATGCCGGCAATGGCTCATTCGTGCCTAGAGCGGGGTCTCATCATCGGAGGGCTCATTCGGAAGTTAGCTTCCGGTTGCAGGAGGACATGATGGATATATCCGCGTCGGATCCGTTCAACGGCGGTTCGTCGACGGCCAGTCTGGAAGAGATCGGATCGGAGGATGATCTATTTTCGACCTACATTGACGTGAAGAAGTTTGGAGGTAATGGAGGAGGAAATTTCGTGGATCATGATGCCAATGGTGGAAGTGAAGGCGCTGGTGGTAATGAGGGAGAGAAGACTTCGAAGCCAAGGCATCGGCATAGCGTTTCGGTGGACGGAACAACTTCGTCGTCGAGCATGTTTGGGGAGATTATGGAAGCGAAGAAAGCCATGCCTCCTGATAAGTTGGCTGAGCTTTGGAGCAGTGATCCCAAACGCGCCAAAAGGATATTGGCAAATCGACAGTCTGCTGCTCGCTCAAAAGAGAGGAAGGCACGATATATACAAGAGTTGGAGCGCAAGGTGCAAACCCTTCAAACGGAAGCAACTACTCTATCAGCCCAATTGACTCTCTTCCAGGCTATGGAGCAACAAGCCCAAATGCGTGATGCTTTGAACGAAGCATTGAAGAAGGAAGTTGAGAGGCTTAAAATTGCTACCGGAGAAATGATGAGCCCTTCCGAGTCTTTTAACTTGGGAATGCATCACATGGCATACGCCCCATCGTCTTTCATTCAACTTTCACAGCAACCAGGGTCTGCTGGCCCTCAAAATATTCAAATGCCACCATATAACCATTCCCCATCCAACATGTCTAGCCACCCTCTGCATCCATCAGACTCTCATTCTCTCTCGGAGGTGCTACAAAGCGACCCTCTCGGTCGATTACAGGGTCTCGATATCAGTAGTAAAGGATCGTCGCTTGTGAAATCCGAGGACCCTTCTCTCTCTGCTAGTGAGAGCAGGAGAAATGGCCTTTCTCTTGGGACTATGAAGGTGAAGCCGGCTGGCAGGACTTCCTTCAGAGGCACAGCCTCTTTGTTAATGGTCGGATTATCGACACCTGCATCATTTCGGTCCTCCAGTGAATTCTCACAGGTTGGCTAA 1239 51.01 MTDPAPSNPIHSPNSNQIPPLNAALPPAAAHKPPPVANATASSSMFANSNAGNGSFVPRAGSHHRRAHSEVSFRLQEDMMDISASDPFNGGSSTASLEEIGSEDDLFSTYIDVKKFGGNGGGNFVDHDANGGSEGAGGNEGEKTSKPRHRHSVSVDGTTSSSSMFGEIMEAKKAMPPDKLAELWSSDPKRAKRILANRQSAARSKERKARYIQELERKVQTLQTEATTLSAQLTLFQAMEQQAQMRDALNEALKKEVERLKIATGEMMSPSESFNLGMHHMAYAPSSFIQLSQQPGSAGPQNIQMPPYNHSPSNMSSHPLHPSDSHSLSEVLQSDPLGRLQGLDISSKGSSLVKSEDPSLSASESRRNGLSLGTMKVKPAGRTSFRGTASLLMVGLSTPASFRSSSEFSQVG 412
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 7121247 7128403 - Cp4.1LG16g07000.1 Cpe16g00688 483063
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe16g00688 412 SMART brlzneu 185 251 IPR004827 GO:0003700|GO:0006355
Cpe16g00688 412 PANTHER ATBZIP TRANSCRIPTION FACTOR 4 237 - -
Cpe16g00688 412 MobiDBLite consensus disorder prediction 37 56 - -
Cpe16g00688 412 PANTHER ATBZIP TRANSCRIPTION FACTOR 237 366 - -
Cpe16g00688 412 MobiDBLite consensus disorder prediction 1 74 - -
Cpe16g00688 412 Coils Coil 205 232 - -
Cpe16g00688 412 MobiDBLite consensus disorder prediction 348 370 - -
Cpe16g00688 412 MobiDBLite consensus disorder prediction 291 330 - -
Cpe16g00688 412 SUPERFAMILY Leucine zipper domain 189 237 IPR046347 GO:0003700|GO:0006355
Cpe16g00688 412 MobiDBLite consensus disorder prediction 348 384 - -
Cpe16g00688 412 CDD bZIP_plant_RF2 190 238 IPR044759 GO:0003700|GO:0006355
Cpe16g00688 412 Gene3D - 188 242 - -
Cpe16g00688 412 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 4 237 - -
Cpe16g00688 412 Coils Coil 239 266 - -
Cpe16g00688 412 MobiDBLite consensus disorder prediction 1 21 - -
Cpe16g00688 412 MobiDBLite consensus disorder prediction 124 161 - -
Cpe16g00688 412 Pfam bZIP transcription factor 189 238 IPR004827 GO:0003700|GO:0006355
Cpe16g00688 412 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 237 366 - -
Cpe16g00688 412 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 187 237 IPR004827 GO:0003700|GO:0006355
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe05g01003 Cpe16g00688 CCT
Cpe02g01122 Cpe16g00688 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe02g01122 Cpe-Chr2:10238148 Cpe16g00688 Cpe-Chr16:7121247 3.08E-135 dispersed
Cpe16g00688 Cpe-Chr16:7121247 Cpe03g01277 Cpe-Chr3:10340875 4.45E-44 dispersed
Cpe16g00688 Cpe-Chr16:7121247 Cpe05g01003 Cpe-Chr5:6554341 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
50737 PF00170 bZIP_1 1.70E-08 CL0018 Cpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe16g00688 - - csv:101205663 571.237