Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe16g00693 ATGAAGTTCTATTCAGCATCGTTGTTTCCTTTGTTTTTTGTTATTGTTAATCTACTTCCCTTTGCCATTGCCGACCTTGAATCCGACAAGCAAGCTCTTCTTGACTTTGCATCTTTGGTTCCACATCGTCGGAGCCTCAACTGGAACGACACTGCCTCTGTATGCACAACTTGGGTTGGCATTACTTGCAGTGAAGATGGAACTCATGTGGTTACCCTCCGGTTACCGGGGATCGGACTTGTCGGTTCGATTCCTTCTAACACTCTAGGGAAACTTCATGGTCTCAAGGTTCTTAGTCTCCGTTCCAACCTCCTTAGCGGAAGAATACCGTCCGATATCACTTCACTTCCTTCTCTTCAATATCTTTTTCTCCAACGGAATAACTTCTCTGGTGGTGTTCCGTCCTCCTTTTCGCCTACTCTTAACGTATTGGACCTATCGTTCAATTCATTAGAAGGGAAGATTCCAAAGTCTATACAAAATTTGACACAACTAACTGGATTGAACCTTCAGAACAACAATCTTTCTGGTTCTATACCCGGTATCGACCTCCCGAAGCTCAAGCATTTCAATATAAGCTATAACCATCTCGTTGGTTCTATTCCGACTTCTTTGAATACATTCCCGAGTTCGTCGTTCATTGGAAATCCTTCATTATGTGGAGCGCCTGTAAACGCTTGCTCCGTAGACCTTTCTCCAGCTCCTAATGCTCCATCTTCACCTGCCATTTCTCAAAAGCAGAGCTCGAAAAAACTGAAGATGGGAGTTATCATTGCTATTGCAGTTGGTGGATTCTTCCTTCTATTCCTTGGAGTTCTTTTTATGGTTTTGTGTTGTTTAAGGAAAAAGGACGGTGAACGCTCCGGCACAAGAAAAGGGAAGGTTTCGGGTGGCGGGAGAAGTGAAAAACCGAAAGAGGAGTTCGGTAGTGGCGTGCAGGAGCCTGAGAAAAACAAGCTGGTGTTTTTTGAAGGCTGTTCGTTTAACTTCGATCTTGAAGATCTATTGAGAGCTTCAGCTGAAGTGCTTGGAAAGGGCAGCTATGGAACAGCTTATAAAGCTGTTCTGGAGGAACCTACCACTGTTGTCGTGAAAAGGTTGAAGGAAGTGGTGGTGGGGAAGAGGGAGTTTGAACAACAAATGGAGATTGTGGGAAGGATCACGCAGCACCCGAATGTCATGCCACTCCGAGCGTATTATTACTCAAAGGATGAAAAGCTCCTCGTTTATGATTACGTCCCGGGAGGCAGCTTGTCGTCACTTTTGCATGGAAACAGAGGTGGGGAAAGAACTCCGCTCGACTGGGACTCGAGAGTGAAGATCGCTCTTGCAACGGCGAAGGGAATTGCTCATATCCATACAGTGGGCGGTCCGAAATTCACCCATGGAAATATCAAGGCCTCAAACGTTCTCCTAACTCAAGATGTGAATGCCTGTGTTTCCGACTTTGGCCTTACTCCTCTTATGAATGTCCCAACTTCTCGAACTGCAGATTATCGTGCGCCCGAGGTGATCGAAGCTCGGAAACACACACACAAGTCAGATGTTTACAGCTTTGGTGTTCTTCTTCTCGAAATGTTAACTGGAAAAGCTCCCCTGCAATCACCACGTCGTGACGATATGGTCGATCTCCCTCGGTGGGTCCAGTCTGTTGTGAGGGAGGAATGGACAGCTGAGGTTTTCGATGTCGAGCTAATGAGGTACCAGAATATCGAAGAAGAGATGGTGCAGATGTTACAAATAGCAATGACTTGTGTAGCGAAGTTGCCCGACATGAGACCGAGCATGGACGAAGTCGTTAGAATGATCGAAGAAATCCGGCAATCTGACTCGGAGAACCGGCCATCGTCCGAAGAGAACAAATCGAAGGACTCAAATGTGCAGACCCCATGA 1893 46.28 MKFYSASLFPLFFVIVNLLPFAIADLESDKQALLDFASLVPHRRSLNWNDTASVCTTWVGITCSEDGTHVVTLRLPGIGLVGSIPSNTLGKLHGLKVLSLRSNLLSGRIPSDITSLPSLQYLFLQRNNFSGGVPSSFSPTLNVLDLSFNSLEGKIPKSIQNLTQLTGLNLQNNNLSGSIPGIDLPKLKHFNISYNHLVGSIPTSLNTFPSSSFIGNPSLCGAPVNACSVDLSPAPNAPSSPAISQKQSSKKLKMGVIIAIAVGGFFLLFLGVLFMVLCCLRKKDGERSGTRKGKVSGGGRSEKPKEEFGSGVQEPEKNKLVFFEGCSFNFDLEDLLRASAEVLGKGSYGTAYKAVLEEPTTVVVKRLKEVVVGKREFEQQMEIVGRITQHPNVMPLRAYYYSKDEKLLVYDYVPGGSLSSLLHGNRGGERTPLDWDSRVKIALATAKGIAHIHTVGGPKFTHGNIKASNVLLTQDVNACVSDFGLTPLMNVPTSRTADYRAPEVIEARKHTHKSDVYSFGVLLLEMLTGKAPLQSPRRDDMVDLPRWVQSVVREEWTAEVFDVELMRYQNIEEEMVQMLQIAMTCVAKLPDMRPSMDEVVRMIEEIRQSDSENRPSSEENKSKDSNVQTP 630
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 7154115 7158317 + Cp4.1LG16g06910.1 Cpe16g00693 483068
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe16g00693 630 Pfam Leucine rich repeat N-terminal domain 27 64 IPR013210 -
Cpe16g00693 630 ProSiteProfiles Protein kinase domain profile. 337 630 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe16g00693 630 MobiDBLite consensus disorder prediction 605 621 - -
Cpe16g00693 630 CDD STKc_IRAK 343 606 - -
Cpe16g00693 630 SUPERFAMILY L domain-like 33 223 - -
Cpe16g00693 630 MobiDBLite consensus disorder prediction 605 630 - -
Cpe16g00693 630 Pfam Protein kinase domain 340 601 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe16g00693 630 Pfam Leucine Rich Repeat 141 162 IPR001611 GO:0005515
Cpe16g00693 630 Gene3D Ribonuclease Inhibitor 183 228 IPR032675 -
Cpe16g00693 630 Gene3D Phosphorylase Kinase; domain 1 305 412 - -
Cpe16g00693 630 MobiDBLite consensus disorder prediction 286 311 - -
Cpe16g00693 630 Gene3D Ribonuclease Inhibitor 26 182 IPR032675 -
Cpe16g00693 630 ProSitePatterns Protein kinases ATP-binding region signature. 343 374 IPR017441 GO:0005524
Cpe16g00693 630 SUPERFAMILY Protein kinase-like (PK-like) 341 604 IPR011009 -
Cpe16g00693 630 Pfam Leucine rich repeat 82 129 IPR001611 GO:0005515
Cpe16g00693 630 PANTHER OS05G0588300 PROTEIN 10 630 - -
Cpe16g00693 630 Gene3D Transferase(Phosphotransferase) domain 1 413 629 - -
Cpe16g00693 630 PANTHER RECEPTOR-LIKE KINASE 10 630 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe11g01095 Cpe-Chr11:9123791 Cpe16g00693 Cpe-Chr16:7154115 0 dispersed
Cpe13g00125 Cpe-Chr13:876777 Cpe16g00693 Cpe-Chr16:7154115 0 dispersed
Cpe14g00065 Cpe-Chr14:361080 Cpe16g00693 Cpe-Chr16:7154115 4.30E-36 dispersed
Cpe16g00693 Cpe-Chr16:7154115 Cpe18g00458 Cpe-Chr18:5556028 0 dispersed
Cpe19g00159 Cpe-Chr19:1294424 Cpe16g00693 Cpe-Chr16:7154115 7.18E-22 dispersed
Cpe16g00693 Cpe-Chr16:7154115 Cpe10g01009 Cpe-Chr10:5791475 0 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
62907 PF00069 Pkinase 6.10E-38 CL0016 Cpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe16g00693 - - csv:101221378 1085.48