Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe16g00699 ATGGACGGAGAACTGCCGCCGGTACCGGCTCCGTTGTCCATCCACCCGGCCGTAGCACCGCTATCATTTTTACTTGGAACATGGAGAGGCAAAGGCGACGGTGGATTCCCCACCATTAATTCCTTCTCTTACGGCGAGGAGATCCATTTCTCCCATTCCGGCAAGCCAGTGATTTCTTACAGCCAAAAGACTTGGAAACTCGATTCTAGAGAGCCTATGCACGCTGAGAGTGGCTACTGGCGTCCCAAGCCCGATGGTACCATTGAAGTTGTAATCGCTCAAAGCACTGGTCTCGTTGAAGTTCAGAAAGGAACATATAATGCAGAAGAGAAAGTGATAATGCTCCAAAGTGAAGTTGTGGGGAATGCTTCTAAGGTGAAAGAAATAAGCAGAGCGTTTAAACTGGTGGATGGAGAACTTTCGTACGTGGTTCAGATGGCTACTGGCTTAACCAGTCTTCAACCACACTTGAAAGCCTCGCTTACTAAAGTTTGA 495 48.28 MDGELPPVPAPLSIHPAVAPLSFLLGTWRGKGDGGFPTINSFSYGEEIHFSHSGKPVISYSQKTWKLDSREPMHAESGYWRPKPDGTIEVVIAQSTGLVEVQKGTYNAEEKVIMLQSEVVGNASKVKEISRAFKLVDGELSYVVQMATGLTSLQPHLKASLTKV 164
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 7199791 7203539 + Cp4.1LG16g06880.1 Cpe16g00699 483074
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe16g00699 164 CDD lipocalin_heme-bd-THAP4-like 18 164 IPR014878 -
Cpe16g00699 164 Gene3D - 13 164 IPR012674 -
Cpe16g00699 164 Hamap Peroxynitrite isomerase. 10 164 IPR022939 -
Cpe16g00699 164 Pfam THAP4-like, heme-binding beta-barrel domain 18 163 IPR014878 -
Cpe16g00699 164 SUPERFAMILY Lipocalins 13 164 IPR012674 -
Cpe16g00699 164 PANTHER THAP4 PROTEIN 6 164 IPR045165 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe16g00699 - K23205 csv:101218771 308.916