Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe16g00700 ATGTTAGGGATGCCGATGGTGAAGCTGGATGTGATGCATCGCCACCATCCACATGTTCAGGAGAAGCTTTATGGTGAACGGAGGAGTCTAGGAAGCACCGATCGCTTCAGAGATATTCACGAGCACGACCACAACCGCCAACGCTCAATCTCCACATCGATGAAAATGAGCAAGACGGATCGTCAGCTTCCTATGCCGTCATCTACACCGATACAACTGAAAATAAGCTCAGGCTTCGATTTTGGAACTAATGAGTATTTTGTTCAGTTCAGAGTCGGAACGCCGCCGCAGAAATTTTTGTTGATTGTGGACACCGGGAGTGACCTAACCTGGTTGAAATGTAGATATCGGCGGTGCTTGGGAAATTGCACCGCCCACGCTCATCATAAGAGCCCGAATCATTCATCCTCTTTCAAATTGATTACCTGCGGCTCAGATTTCTGCCTCGGTGATCTCCAACTACTCTTCGCCATCCCGGATTGTGAAGTTCCTTCCAACCCTTGCGTCTATGATTACAGCTACATAGGAGGAGGGGCTGCGACGGGATTGTTCGCAAACGAGACGGTAACCGTAGGCCTCACAAACGGAAAGGAGAAACAGCTCCATGATACTCTAATCGGCTGCACCGAACTGTTCAATGCAATGCAGTTGAAAGGAGTCGACGGCATCCTTGCCTTAGGCACTGGCGCACACTCCTTCGCCCACAGAGCCGCTCTAGACAAAAACGGCGGTGGCTTCTCCTACTGCCTCATCGACCATCTCAGCCACCACAGCGCCACCAGCTACCCCCCCGCCGAACCCCTCTCTGTTGCTCCAGTCGGCAACATGACCTTCATCAACCTCCACCTCGGCGACGCTTTCAACAGCTACTACGGCGTGGGGCTCATCGGAATCTCTATCATGCTCACCGCACCCGCGTTCGACGTGTTCATAGAAGCCATGGTTCAAAAGCTGAAGAAATTCCAGCAAATCCTTGCGGATCCCTTCGCTTATTGCTTCAATAACACCGAATACTCCCATGAAATGGCCCCCAAGCTTCGATTCCATTTGGAGAAAGGGGTGGTGTTCGAGCCGCCGCCCAAAAGCTACATTGTGAAGGTGGACGATATCTTGTGTCTTGGCTTCACTTCTAATTCCTTTTCCAGACACCAATATCATCGGCAATATTCTTCAGCAAAATTTCCTTCGGCAATTTGA 1197 50.71 MLGMPMVKLDVMHRHHPHVQEKLYGERRSLGSTDRFRDIHEHDHNRQRSISTSMKMSKTDRQLPMPSSTPIQLKISSGFDFGTNEYFVQFRVGTPPQKFLLIVDTGSDLTWLKCRYRRCLGNCTAHAHHKSPNHSSSFKLITCGSDFCLGDLQLLFAIPDCEVPSNPCVYDYSYIGGGAATGLFANETVTVGLTNGKEKQLHDTLIGCTELFNAMQLKGVDGILALGTGAHSFAHRAALDKNGGGFSYCLIDHLSHHSATSYPPAEPLSVAPVGNMTFINLHLGDAFNSYYGVGLIGISIMLTAPAFDVFIEAMVQKLKKFQQILADPFAYCFNNTEYSHEMAPKLRFHLEKGVVFEPPPKSYIVKVDDILCLGFTSNSFSRHQYHRQYSSAKFPSAI 398
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 7204525 7206252 + Cp4.1LG16g06900.1 Cpe16g00700 483075
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe16g00700 398 Pfam Xylanase inhibitor C-terminal 301 378 IPR032799 -
Cpe16g00700 398 Pfam Xylanase inhibitor N-terminal 86 262 IPR032861 -
Cpe16g00700 398 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 101 112 IPR001969 GO:0004190|GO:0006508
Cpe16g00700 398 PANTHER ASPARTIC PROTEINASE NANA, CHLOROPLAST 301 378 - -
Cpe16g00700 398 Gene3D Acid Proteases 298 385 IPR021109 -
Cpe16g00700 398 PANTHER ASPARTIC PROTEINASE NANA, CHLOROPLAST 9 300 - -
Cpe16g00700 398 Gene3D Acid Proteases 60 262 IPR021109 -
Cpe16g00700 398 ProSiteProfiles Peptidase family A1 domain profile. 86 398 IPR033121 -
Cpe16g00700 398 PANTHER OS07G0603500 PROTEIN-RELATED 9 300 - -
Cpe16g00700 398 PANTHER OS07G0603500 PROTEIN-RELATED 301 378 - -
Cpe16g00700 398 SUPERFAMILY Acid proteases 78 380 IPR021109 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe05g01021 Cpe16g00700 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe05g01007 Cpe-Chr5:6577056 Cpe16g00700 Cpe-Chr16:7204525 2.83E-109 dispersed
Cpe16g00700 Cpe-Chr16:7204525 Cpe13g00033 Cpe-Chr13:270438 1.93E-34 dispersed
Cpe16g00700 Cpe-Chr16:7204525 Cpe05g01021 Cpe-Chr5:6657366 2.76E-107 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe16g00700 - - cpep:111777066 768.844