Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe16g00704 ATGACTATGATGGTCGCTGCAAGAGCAATCGCAACCGCAACAGCTCGATCAGTGGTGCGATCGACTAGGTTCCCTCTTCAATCTCCATCGCTATATGTGTTTGCTCAGCGGAAATCTCACTCCCACACTCTTCTCATTCGTCAGATGAGCTCTGAGGCGCCGAGCGTTGTTACTCGTCTTCAAAGTTCTGGATTGTTTCGAAGCCAAGGTCTTATTGGAGGGAAGTGGATTGATGCTTATGATGGGAAGACCTTTAAGGTTCATAATCCAGCCAATGGTGAAGTTATAACCAATGTCCCGCTCATGGGCAAAAGGGAAACCGATGATGCTATTTCTTCAGCTCATGATGCTTTTAAGTCTTGGAGCAAGCTCACTGCAGCTGATCGGAGTAATCGCTTACGGAAATGGTATGAGCTCCTAATTGCCCACAAAAAAGAGCTTGGACAACTGATAACCTTGGAGCAAGGAAAACCCTTAAAGGAAGCTATGGGTGAGGTTACCTATGGAGCCAGCTTTATTGAGTTCTTTTCTGAGGAAGCAAAACGAGTATATGGTGACATAATCTCACCAACTTTAGCGGATCGACGACTCTTTGTCTTGAAGCAGATAAATTCATGGAAATTTATGTCTTGTTCTGCTTTGAGTTTCCTGTATGAGCTCCTAATTGCCCACAAAAAAGAGCTTGGACAACTGATAACCTTGGAGCAAGGAAAACCCTTAAAGGAAGCTATGGGTGAGGTTACCTATGGAGCCAGCTTTATTGAGTTCTTTTCTGAGGAAGCAAAACGAGTATATGGTGACATAATCTCACCAACTTTAGCGGATCGACGACTCTTTGTCTTGAAGCAGCCAGTTGGAGTTGTTGGTGTTATTACCCCTTGGAACTTTCCATTGGCTATGATTACAAGAAAGTTGATGTATGCTATTGAAAAAACCTTATCTTCTGTTACCCTTGCATTCCAGGTTGGACCTGCTCTTGCATGTGGTTGTACGGTGGTCATAAAACCTGCGGAACTTACCCCCTTGACAGCTTTAGCAGCAGCTGAGCTCTCACTTCAAGCTGGAATTCCTGCAGGAGTCGTGAATGTGGTTATGGGAGATGCTCCAGCTGTTGGGGATGCTATACTTGCAAGTTCTCAGGTAAGAAAGATCACGTTTACTGGCTCAACAGCAGTTGGAAAAAAGTTGATGGCAGGAGCTGCTGGAACTGTTAAAAGGGTGTCCTTAGAACTTGGTGGTAATGCCCCTTGCATAGTCTTTGATGACGCAGATGTGGATGTTGCAGTAAAAGGAGCTATTGCAGCGAAGTTCCGAAATACTGGACAGACTTGTGTTTGTGCGAATAGAATTTTTGTTCAAGAAGGTATATACGAGAAATTTGCTGATGCTTTCTCAAAAGCTGTGCAAAGTCTGCAAGTTGGTGATGGTTTCGGTGAAGGTGTATCTCTGGGTCCTTTAATTAATGAAGCTGCCGTGCAGAAGGTTGAGAAATTTCTTCAAGATGCCACCACAAAGGGAGCAAAAGTTCTTCTTGGAGGTAAAAGACACAGCCTTGGAATGACATTTTTTGAGCCTACAGTTCTTACTGACGTGAAGAATGACATGCTTTTATCTAGGGAGGAAATATTTGGTCCCGTGGCACCCTTACTGCCATTCAGAACAGAGGAGGAAGCAATTGCTCTCGCTAATGACACCAATGCAGGATTAGCGGCTTACATATTCACAAATAGTATTCAACGTTCATGGAGAGTGACTGAAGCTCTTGAATATGGATTGGTTGGTGTTAATGAAGGCTTGATTTCTACAGAGGTGGCTCCATTTGGTGGCGTTAAACAGTCGGGCCTTGGTCGGGAGGGGTCAAAATATGGGCTGGACGAGTATCTTGAGCTGAAATATGTTTGCATGGGGAACATGGGCGGCAACTAG 1926 44.5 MTMMVAARAIATATARSVVRSTRFPLQSPSLYVFAQRKSHSHTLLIRQMSSEAPSVVTRLQSSGLFRSQGLIGGKWIDAYDGKTFKVHNPANGEVITNVPLMGKRETDDAISSAHDAFKSWSKLTAADRSNRLRKWYELLIAHKKELGQLITLEQGKPLKEAMGEVTYGASFIEFFSEEAKRVYGDIISPTLADRRLFVLKQINSWKFMSCSALSFLYELLIAHKKELGQLITLEQGKPLKEAMGEVTYGASFIEFFSEEAKRVYGDIISPTLADRRLFVLKQPVGVVGVITPWNFPLAMITRKLMYAIEKTLSSVTLAFQVGPALACGCTVVIKPAELTPLTALAAAELSLQAGIPAGVVNVVMGDAPAVGDAILASSQVRKITFTGSTAVGKKLMAGAAGTVKRVSLELGGNAPCIVFDDADVDVAVKGAIAAKFRNTGQTCVCANRIFVQEGIYEKFADAFSKAVQSLQVGDGFGEGVSLGPLINEAAVQKVEKFLQDATTKGAKVLLGGKRHSLGMTFFEPTVLTDVKNDMLLSREEIFGPVAPLLPFRTEEEAIALANDTNAGLAAYIFTNSIQRSWRVTEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGLDEYLELKYVCMGNMGGN 641
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 7228718 7241335 - Cp4.1LG16g07130.1 Cpe16g00704 483079
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe16g00704 641 SUPERFAMILY ALDH-like 213 637 IPR016161 GO:0016491
Cpe16g00704 641 PANTHER SUCCINATE-SEMIALDEHYDE DEHYDROGENASE, MITOCHONDRIAL 213 638 - -
Cpe16g00704 641 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 59 203 IPR016162 GO:0016491
Cpe16g00704 641 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 214 627 IPR016162 GO:0016491
Cpe16g00704 641 PANTHER SUCCINATE-SEMIALDEHYDE DEHYDROGENASE, MITOCHONDRIAL 63 202 - -
Cpe16g00704 641 Pfam Aldehyde dehydrogenase family 214 309 IPR015590 GO:0016491
Cpe16g00704 641 Pfam Aldehyde dehydrogenase family 318 633 IPR015590 GO:0016491
Cpe16g00704 641 Pfam Aldehyde dehydrogenase family 76 199 IPR015590 GO:0016491
Cpe16g00704 641 SUPERFAMILY ALDH-like 51 197 IPR016161 GO:0016491
Cpe16g00704 641 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 437 448 IPR016160 GO:0016491
Cpe16g00704 641 PANTHER SUCCINATE-SEMIALDEHYDE DEHYDROGENASE, MITOCHONDRIAL 213 638 - -
Cpe16g00704 641 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 413 602 IPR016163 GO:0016620
Cpe16g00704 641 PANTHER SUCCINATE-SEMIALDEHYDE DEHYDROGENASE, MITOCHONDRIAL 63 202 - -
Cpe16g00704 641 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 409 416 IPR029510 GO:0016491
Cpe16g00704 641 CDD ALDH_F5_SSADH_GabD 87 635 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe05g01029 Cpe16g00704 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe14g00552 Cpe-Chr14:3505085 Cpe16g00704 Cpe-Chr16:7228718 2.63E-36 dispersed
Cpe15g00387 Cpe-Chr15:5089964 Cpe16g00704 Cpe-Chr16:7228718 2.52E-08 dispersed
Cpe16g00704 Cpe-Chr16:7228718 Cpe18g00825 Cpe-Chr18:7639618 3.72E-07 dispersed
Cpe16g00704 Cpe-Chr16:7228718 Cpe05g01029 Cpe-Chr5:6743169 1.52E-73 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe16g00704 K17761 - csv:101217352 704.901