Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe16g00705 ATGAATTCGAACACCGCGTCTAGCTCCGGAGGCTCGGGATCGAACGATTCGTCATCAAGTAAAAGGAATTCAAAGCGACCTAAATATTCGAGGTTTACCCAGCAGGAGCTTCCAGCGTGTAAACCCATCCTCACACCAAGATGGGTGATTTCAGTATTCATGTTAGTTAGCATTATCTTTGTTCCCATTGGAGTTGCTTCCTTGTTTGCTTCCAGAGATGTTGTTGAAATAATTGATCGTTATGAAACTGAGTGTGTACCAGAAAGATTTAGAAACGACAAAGTTGGGTTCATACAGAGCACTGCAATTAAAATCTGCCGCAGAAATATAACTGTTCCGAAACGTATGAAGCAACCAATATATGTCTATTACCAGCTCGACAATTTCTATCAGAATCACCGCAGATATGTGCAGAGCCGTAGTGATAAGCAATTGAGAGATGCTGGAAGTGAGAATGATCTAGGCTCTTGCAAGCCCGAAGACAAAGTGAATGGGAAGCCAATCGTTCCCTGTGGTTTGATAGCGTGGAGTCTGTTTAATGATACTTATAACTTCACCCGTAACAAGAAGCAAGTCGCTGTGAACAAGATCGGTATCTCATGGAAGAGTGACCGGGAACACAAATTTGGCAAGAATGTATTTCCCAAGAACTTTCAGAATGGTACTCTGAAAGGAGGGAAAACCCTCAATGAATCCATACCATTGAGTCAGCAGGAGGACCTTATTGTGTGGATGCGAACTGCTGCACTTCCCACATTTAGAAAGTTGTATGGAAAGATAGAAGTGGATCTTGAGAAAGATGATGTAATAGATGTGGTTTTGGAGAACAATTACAACACATACAGTTTTAACGGCAAGAAAAAGCTTGTGCTCTCTACAACTAGCTGGCTTGGTGGGAAGAATGACTTTCTTGGCATTGCTTATCTTACTGTCGGTGGGTTATGCTTCTTTTTGGCAATGGCTTTCACAATCGTCTATCTTGTTAAGCCAAGGCGACTTGGGGACCCATCATATCTGTCATGGAATAGAAACCCGAGCGGGCACTGA 1047 42.69 MNSNTASSSGGSGSNDSSSSKRNSKRPKYSRFTQQELPACKPILTPRWVISVFMLVSIIFVPIGVASLFASRDVVEIIDRYETECVPERFRNDKVGFIQSTAIKICRRNITVPKRMKQPIYVYYQLDNFYQNHRRYVQSRSDKQLRDAGSENDLGSCKPEDKVNGKPIVPCGLIAWSLFNDTYNFTRNKKQVAVNKIGISWKSDREHKFGKNVFPKNFQNGTLKGGKTLNESIPLSQQEDLIVWMRTAALPTFRKLYGKIEVDLEKDDVIDVVLENNYNTYSFNGKKKLVLSTTSWLGGKNDFLGIAYLTVGGLCFFLAMAFTIVYLVKPRRLGDPSYLSWNRNPSGH 348
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 7243944 7247345 + Cp4.1LG16g07030.1 Cpe16g00705 483080
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe16g00705 348 PIRSF Lem3/Cdc50 1 344 IPR005045 GO:0016020
Cpe16g00705 348 PANTHER CELL CYCLE CONTROL PROTEIN 50 7 347 IPR005045 GO:0016020
Cpe16g00705 348 MobiDBLite consensus disorder prediction 1 20 - -
Cpe16g00705 348 PANTHER ALA-INTERACTING SUBUNIT 3 7 347 - -
Cpe16g00705 348 MobiDBLite consensus disorder prediction 1 31 - -
Cpe16g00705 348 Pfam LEM3 (ligand-effect modulator 3) family / CDC50 family 68 332 IPR005045 GO:0016020
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe05g01030 Cpe16g00705 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe19g01151 Cpe-Chr19:7715446 Cpe16g00705 Cpe-Chr16:7243944 2.13E-143 transposed
Cpe16g00705 Cpe-Chr16:7243944 Cpe05g01030 Cpe-Chr5:6762928 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe16g00705 - - csv:101216400 634.409