Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe16g00708 ATGGCAGATAATCCCAGAACAGATTCATTCAGAACAGAACTTTTGTCCCCTGAGGGTGTGGCTGCTGGAAGAGATGGAATGGTGTCAAAGGTGCCCTCGTGGCGACTTAATATGGACGAGTTCCATTTGCCTGCAACCAACAAGAGATCTCATCATGGCATTGTTTATTACTGGAAGTCATGGAAGAGACAAAGAAATGTTGCTAAGTACTATGAAAGGCAAGAAAGTCTTCTCAAAGGATTCAATGAAGTTGACTCCTACAATGAACTGGGTGTCGTGCCGGGAACCTTAACTGAGGAAGAAAAGAAGCAAGAGGCCAACGGTGAGAGAATGGCAATATATGCATCCAACATAGCCAACATGTTGATCTTCATCGCAAAAGTGTATGCTTCAGTTGAGAGCAGATCACTAGCAGTTATAGCATCAACACTAGATTCCCTGTTGGATCTTTTATCAGGGTTCATATTATGGTTTACAGCTAATGCTATGAGAAAGCCAAATCAGTATCGTTATCCTATTGGCAAGAATCGGATGCAACCAGGAATTGTCGTGTTTGCATCAATCATGGCAACTCTTGGAATACAAATTTTGCTTGAATCAGCTCGAGAACTTATTTCAAAGGTTCAACCAGATAGAGATCCAGATAAAGTAAAATGGATGGTTGGAATAATGGCATCCGTAACAGTAGTGAAAATTTGCCTTACAATCTACTGCCGCAAATTCGCAAATGAAATCATCAGAGCCTATGCCCAAGACCATTTCTTTGATGTAATTACCAATTCAATTGGTCTTGCGACTGCCCTTTTGGCCATCAAATTCTACTGGTGGCTTGATCCCCTTGGGGCTATCCTAATAGCATTGTACACTATCAGCAACTGGGCGAAAACTGTGATGGAAAATGTATGGTCGCTAATAGGGAGGACAGCCCCACCAGACTACTTGGCCAAGCTAACATATCTAGTATGGAATCATCACGAGGAAATCAAACATATTGATACAGTGAGAGCGTATACCTTTGGGTGCAACTATTTTGTGGAGGTGGACATAGTGTTGCCTGGTGAAACGTCTCTAAGTCAAGCACATGACATAGGAGAATCACTTCAAGATAAACTTGAACAGCTTGATGAGGTTGATCGTGCATTTGTTCATGTGGACTTTGAGTTCACTCATAAGCCAGAGCACAAGCCTAAAGCTTCATAG 1200 42.08 MADNPRTDSFRTELLSPEGVAAGRDGMVSKVPSWRLNMDEFHLPATNKRSHHGIVYYWKSWKRQRNVAKYYERQESLLKGFNEVDSYNELGVVPGTLTEEEKKQEANGERMAIYASNIANMLIFIAKVYASVESRSLAVIASTLDSLLDLLSGFILWFTANAMRKPNQYRYPIGKNRMQPGIVVFASIMATLGIQILLESARELISKVQPDRDPDKVKWMVGIMASVTVVKICLTIYCRKFANEIIRAYAQDHFFDVITNSIGLATALLAIKFYWWLDPLGAILIALYTISNWAKTVMENVWSLIGRTAPPDYLAKLTYLVWNHHEEIKHIDTVRAYTFGCNYFVEVDIVLPGETSLSQAHDIGESLQDKLEQLDEVDRAFVHVDFEFTHKPEHKPKAS 399
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 7252016 7254612 - Cp4.1LG16g07110.1 Cpe16g00708 483083
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe16g00708 399 Pfam Dimerisation domain of Zinc Transporter 313 385 IPR027470 -
Cpe16g00708 399 Pfam Cation efflux family 114 304 IPR002524 GO:0006812|GO:0008324|GO:0016021|GO:0055085
Cpe16g00708 399 PANTHER MITOCHONDRIAL METAL TRANSPORTER 1-RELATED 2 398 - -
Cpe16g00708 399 PANTHER CATION DIFFUSION FACILITATOR FAMILY TRANSPORTER 2 398 - -
Cpe16g00708 399 SUPERFAMILY Cation efflux protein cytoplasmic domain-like 309 385 IPR036837 -
Cpe16g00708 399 Gene3D Cation efflux protein, cytoplasmic domain 311 386 IPR036837 -
Cpe16g00708 399 TIGRFAM CDF: cation diffusion facilitator family transporter 112 385 IPR002524 GO:0006812|GO:0008324|GO:0016021|GO:0055085
Cpe16g00708 399 SUPERFAMILY Cation efflux protein transmembrane domain-like 107 306 IPR027469 -
Cpe16g00708 399 Gene3D Cation efflux protein transmembrane domain 110 304 IPR027469 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe05g01032 Cpe16g00708 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe01g00203 Cpe-Chr1:1145431 Cpe16g00708 Cpe-Chr16:7252016 1.27E-149 dispersed
Cpe01g01111 Cpe-Chr1:6569622 Cpe16g00708 Cpe-Chr16:7252016 9.17E-150 dispersed
Cpe16g00708 Cpe-Chr16:7252016 Cpe18g00137 Cpe-Chr18:2918424 6.02E-110 dispersed
Cpe16g00708 Cpe-Chr16:7252016 Cpe05g01032 Cpe-Chr5:6770540 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe16g00708 - - csv:101216157 749.969