Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe16g00709 ATGGCCTTCTCATCCTCCTTCGCTGGATCTGCTGTTTCCTCTTCTCTGATCCAAGCGTCTCGTTCTGACTTCTCGCCGTCCGATTGCCGGAAGGCTTCATGCGTCGGGCGCTCTTTGAAGCTTCAATCTGCCATTGTCGGAACTACTATCTCGAGTGGGGCGTCTTCTTTACAGTTAAGGACATCTAAAAATCGCACCGTTCAACCCATCAAAGCTACGGCCACTGAGGCACCTCCGACGATCCAAAGTTTTGGTCGAATTGGAAGACTGGTATTACGAATTGCAACCTCCAGAGATGATGTTGATGTTGTAGCAGTTAATGATCCATTTGTTGACGCTAAGTACATGGCTTACATGCTCAAATACGATTCTACTCATGGTATTTTCAATGGAACCATCAAGGTTCTCAGTGATTCAACCTTGGAAGTTAATGGGAAGCAGATCAAAGTTGCAAGCAAAAGGAACCCTGCAGAGATTCCTTGGGGTGATTATGGGGCTGAATATGTTGTAGAGTCCTCAGGAGTTTTCACTACAAAAGAGAAGGCTTCAGCACACTTGAAGGTTGTTCATGAGGAATTTGGCATTGTTGAAGGTCTAATGACAACAGTGCATGCAACCACAGCAACACAAAAGACTGTCGATGGCCCTTCAATGAAGGATTGGAGAGGTGGCCGCGGTGCTGCACAAAATATAATTCCTAGCTCTACTGGTGCTGCCAAGGCTGTTGGTAAAGTTCTTCCGGAGCTAAATGGAAAGCTCACTGGAATGGCTTTCCGTGTCCCAGCACCCAATGTATCTGTTGTGGACTTAACCTGCCGACTTGAAAAAAGTGCTTCATATGAAGATGTAAAGGCAGCAGTAAAGTATGCATCCGAAGGTCCATTGAAAGGCATTCTTGGGTATACCGATGAGGATGTTGTCTCTACTGATTTTCTTGGTGACTCCAGATCAAGTATATTTGATGGAAAGGCTGGAATAGGCCTCAGTGCCTCATTCGTGAAGCTGGTGACTTGGTATGACAATGAATGGGGATACAGCACCCGAGTTCTGGACCTTATCGAGCACATGGCATTGGTTTCAGCCTAA 1086 46.13 MAFSSSFAGSAVSSSLIQASRSDFSPSDCRKASCVGRSLKLQSAIVGTTISSGASSLQLRTSKNRTVQPIKATATEAPPTIQSFGRIGRLVLRIATSRDDVDVVAVNDPFVDAKYMAYMLKYDSTHGIFNGTIKVLSDSTLEVNGKQIKVASKRNPAEIPWGDYGAEYVVESSGVFTTKEKASAHLKVVHEEFGIVEGLMTTVHATTATQKTVDGPSMKDWRGGRGAAQNIIPSSTGAAKAVGKVLPELNGKLTGMAFRVPAPNVSVVDLTCRLEKSASYEDVKAAVKYASEGPLKGILGYTDEDVVSTDFLGDSRSSIFDGKAGIGLSASFVKLVTWYDNEWGYSTRVLDLIEHMALVSA 361
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 7255572 7259737 - Cp4.1LG16g07140.1 Cpe16g00709 483084
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe16g00709 361 SMART gp_dh_n_7 84 197 IPR020828 GO:0051287
Cpe16g00709 361 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 81 206 IPR036291 -
Cpe16g00709 361 SUPERFAMILY Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 185 339 - -
Cpe16g00709 361 Gene3D Dihydrodipicolinate Reductase; domain 2 177 341 - -
Cpe16g00709 361 PANTHER GLYCERALDEHYDE 3-PHOSPHATE DEHYDROGENASE 187 360 IPR020831 GO:0016620
Cpe16g00709 361 PANTHER GLYCERALDEHYDE 3-PHOSPHATE DEHYDROGENASE 25 187 IPR020831 GO:0016620
Cpe16g00709 361 PANTHER GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE-RELATED 187 360 - -
Cpe16g00709 361 PANTHER GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE-RELATED 25 187 - -
Cpe16g00709 361 Pfam Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 81 179 IPR020828 GO:0051287
Cpe16g00709 361 PRINTS Glyceraldehyde-3-phosphate dehydrogenase signature 295 310 IPR020831 GO:0016620
Cpe16g00709 361 PRINTS Glyceraldehyde-3-phosphate dehydrogenase signature 198 214 IPR020831 GO:0016620
Cpe16g00709 361 PRINTS Glyceraldehyde-3-phosphate dehydrogenase signature 255 272 IPR020831 GO:0016620
Cpe16g00709 361 Pfam Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 186 339 IPR020829 GO:0016620
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe15g00903 Cpe16g00709 CCT
Cpe05g01033 Cpe16g00709 CCT
Cpe04g00865 Cpe16g00709 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe16g00709 Cpe-Chr16:7255572 Cpe20g00323 Cpe-Chr20:1817586 9.26E-125 dispersed
Cpe15g00903 Cpe-Chr15:8679143 Cpe16g00709 Cpe-Chr16:7255572 0 wgd
Cpe16g00709 Cpe-Chr16:7255572 Cpe04g00865 Cpe-Chr4:7943557 0 wgd
Cpe16g00709 Cpe-Chr16:7255572 Cpe05g01033 Cpe-Chr5:6773286 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe16g00709 K00134 - csv:101203472 615.92