Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe16g00710 ATGGCGTCTGCAGCTTCCCCTGCCACTTTCCATCTCCTTCCCACCACATCCTCTTCCACTTCTTCAACCCGCTCCGCCCTTCTTCAGTTTTCCCCCACCGCCACTTCCTCCTCCTCAATCCGCCTCCGCAGCGCCCCCATTCAGCGCCTTGGCTTTGCCGCCTCCGACCCACTTTTCTCCCTCCATGTCGCCTCCAAGATTCGGTCGTTTCGGGGCAAGGCTTCGAGGGGCGTGGTGTCCATGGCTAAGAAGAGCGTTGGGGATTTGACTGCATCGGATTTGAAGGGGAAGAAAGTGTTCGTGAGGGCTGATCTGAATGTGCCCTTGGATGAGAATCAGAATATTACTGATGACACTAGGATCAGAGCTGCTATTCCTACAATCAAGCATTTGACGGAGAAGGGAGCTAAAGTCATTCTCTCCAGCCATCTGGGACGACCAAAAGGAGTGACTCCAAAATTCAGCTTGGCACCTCTTGTGCCTAGGCTTTCTGAACTCCTTGGCATTCAGGTTGTGAAGGCTGATGACTGCATTGGTCCTGAGGTTGAAAAATTGGTTGCTTCCCTACCAGAAGGTGGTGTCCTTCTCCTTGAGAATGTGAGATTCTACAAGGAAGAAGAGAAAAATGAACCCGAGTTTGCGAAGAAGCTTGCTTCTCTAGCTGATCTTTTTGTAAACGATGCATTTGGAACTGCCCATAGAGCTCATGCGTCGACCGAGGGAGTCACCAAGTTTTTGAAGCCTTCTGTAGCTGGTTTCCTCTTGCAAAAGGAACTCGACTATCTAGTAGGGGCCGTGTCGAGCCCCAAGAGGCCATTTGCTGCTATTGTTGGTGGTTCGAAGGTCTCTTCAAAAATTGGAGTGATCGAATCACTTCTAGAGAAGTGTGACATCCTACTCCTTGGTGGTGGAATGATCTTTACATTCTACAAGGCACAGGGACTTCCCGTCGGTTCATCTTTGGTGGAAGAGGATAAGCTTGAACTAGCAACCTCCCTCCTCGCGAAGGCGAAGGCGAAAGGAGTATCCCTTTTGTTACCGACCGACGTCGTCATTGCCGATAAGTTTGCTCCAGATGCAAACAGCAAGATTGTCCCAGCATCTGCTATCCCTGATGGATGGATGGGGCTGGACATTGGACCAGATTCCGTAAAGACATTCAATGATGCTTTGGACACTACCCAAACTATCATCTGGAATGGACCAATGGGAGTGTTCGAATTCGACAAGTTTGCTGTCGGAACAGAGTCGATTGCTAAGAAACTTGCAGAGCTCAGCGGGAAGGGGGTGACGACCATCATCGGAGGTGGAGACTCGGTTGCAGCTGTGGAGAAGGTGGGAGTTGCGAGCGTTATGAGCCACATTTCGACTGGTGGGGGTGCCAGTTTGGAGTTGTTGGAAGGCAAAGAGCTACCCGGTGTCCTTGCTCTCGATGAGGCGGTACCTGTCGCCGTGTAG 1458 51.17 MASAASPATFHLLPTTSSSTSSTRSALLQFSPTATSSSSIRLRSAPIQRLGFAASDPLFSLHVASKIRSFRGKASRGVVSMAKKSVGDLTASDLKGKKVFVRADLNVPLDENQNITDDTRIRAAIPTIKHLTEKGAKVILSSHLGRPKGVTPKFSLAPLVPRLSELLGIQVVKADDCIGPEVEKLVASLPEGGVLLLENVRFYKEEEKNEPEFAKKLASLADLFVNDAFGTAHRAHASTEGVTKFLKPSVAGFLLQKELDYLVGAVSSPKRPFAAIVGGSKVSSKIGVIESLLEKCDILLLGGGMIFTFYKAQGLPVGSSLVEEDKLELATSLLAKAKAKGVSLLLPTDVVIADKFAPDANSKIVPASAIPDGWMGLDIGPDSVKTFNDALDTTQTIIWNGPMGVFEFDKFAVGTESIAKKLAELSGKGVTTIIGGGDSVAAVEKVGVASVMSHISTGGGASLELLEGKELPGVLALDEAVPVAV 485
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 7260439 7263493 - Cp4.1LG16g07080.1 Cpe16g00710 483085
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe16g00710 485 PANTHER PHOSPHOGLYCERATE KINASE 1 480 - -
Cpe16g00710 485 ProSitePatterns Phosphoglycerate kinase signature. 98 108 IPR015911 GO:0004618|GO:0006096
Cpe16g00710 485 Gene3D - 86 263 IPR015824 GO:0004618|GO:0006096
Cpe16g00710 485 CDD Phosphoglycerate_kinase 93 479 IPR001576 GO:0004618|GO:0006096
Cpe16g00710 485 Gene3D - 266 479 IPR015824 GO:0004618|GO:0006096
Cpe16g00710 485 PRINTS Phosphoglycerate kinase family signature 93 109 IPR001576 GO:0004618|GO:0006096
Cpe16g00710 485 PRINTS Phosphoglycerate kinase family signature 115 137 IPR001576 GO:0004618|GO:0006096
Cpe16g00710 485 PRINTS Phosphoglycerate kinase family signature 192 207 IPR001576 GO:0004618|GO:0006096
Cpe16g00710 485 PRINTS Phosphoglycerate kinase family signature 220 242 IPR001576 GO:0004618|GO:0006096
Cpe16g00710 485 PRINTS Phosphoglycerate kinase family signature 251 273 IPR001576 GO:0004618|GO:0006096
Cpe16g00710 485 PRINTS Phosphoglycerate kinase family signature 274 293 IPR001576 GO:0004618|GO:0006096
Cpe16g00710 485 PRINTS Phosphoglycerate kinase family signature 396 421 IPR001576 GO:0004618|GO:0006096
Cpe16g00710 485 PRINTS Phosphoglycerate kinase family signature 432 443 IPR001576 GO:0004618|GO:0006096
Cpe16g00710 485 PRINTS Phosphoglycerate kinase family signature 455 472 IPR001576 GO:0004618|GO:0006096
Cpe16g00710 485 PANTHER PHOSPHOGLYCERATE KINASE 1 480 IPR001576 GO:0004618|GO:0006096
Cpe16g00710 485 SUPERFAMILY Phosphoglycerate kinase 88 479 IPR036043 GO:0004618|GO:0006096
Cpe16g00710 485 Pfam Phosphoglycerate kinase 92 469 IPR001576 GO:0004618|GO:0006096
Cpe16g00710 485 Hamap Phosphoglycerate kinase [pgk]. 88 479 IPR001576 GO:0004618|GO:0006096
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe05g01034 Cpe16g00710 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe03g00189 Cpe-Chr3:943904 Cpe16g00710 Cpe-Chr16:7260439 1.07E-42 transposed
Cpe15g00901 Cpe-Chr15:8668768 Cpe16g00710 Cpe-Chr16:7260439 0 wgd
Cpe16g00710 Cpe-Chr16:7260439 Cpe04g00864 Cpe-Chr4:7940374 0 wgd
Cpe16g00710 Cpe-Chr16:7260439 Cpe05g01034 Cpe-Chr5:6779458 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe16g00710 K00927 - csv:101215670 878.241