Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe16g00711 ATGGTGTTTCTTCCTTGGTTCGCTCTGCAAATTCATCAGTGTGCCAGTACTTCCATTGCCGTGAAATTTATGTTCGTTTACTTGGCTGAGTTAACGATAAAGTTATCAAAACATGATGAGATGGAACAGTCAAGCAATGACCAGCTCCAATGCACTTCCATGCAATATGGATTTGGGGAACTACAACCTGCATCTAAATCATCCATAGAGGACCCTATGAGTATTGTTAACATGCAAAGTGATGGAAGATCCATGGATCTTAGGATGTCAGAGGTTAAGCCTGTCCTTAATTACTCCATACAGACAGGCGAGGAGTTTGCTTTTGAGTTTATGCGTGACCGAGCAAATTCCCGAAAACCACTCATTTCGGACTCAGTTAGTGACCCTAATTGCACTTCAGGTTATATGGATTTAAAAGGAATTTTAGGCCTTAGTCGTACTGGGTCTGAATGTGGATCAGATAATTCAATGATTACTTCAATGGAAAAAGTTTCTTGTGATGAGGATCTCCAGAATATGATGGAGGAGTGTAATGAGTTCAAAGATGACAAAGGATCCAAAAAACTTAGAATTTTTCTGTTTTCAATGAGTGATTTGGATAAAGGGAGTTTTTCTATGGGTAATGTGGATAATGACTCTGAGATCCAGTATGTTGTCGCAGTCAATGGCATGGACAGTGTTACTAGAAAAAGCTCAAACCTGCATGGCTTAGCAAGTTTTTCTGCCAATAACCTGGATGAGGTAGATGGACAAAGCATTGAAAGGGGTACAGTTCTTAAGGAATTGGCTGGTATCAATGCATCGGCCTTAACTGGTAATATTGCCCCGTCATCCTTGCAGTCTTCACAACCTGTTCGGGCAAATGCCTATAATGCTTATGAAACCTTCGTACAGACTTATCATGAACCTCAAGGACAATATCCAGAGATACCATCAACAAAGTTGAAAGGCAAGTTAAATGATTCGTTTGAGAAAGAGATTCATCCTAAAAGTGGCTGCTCCTCAATTCCTTCTCATTTGTTTGATGAAAAATCAACTCCAGTTTCCATGGCGCAAGGTGAGTTTCCCTTCTTAACTCCCAAGAATGAGTCAGACCTCCAGGGTTCGGAAGGACTTTCTTCAATGTCTGTTTCTGGAAATCCTATAGTTTCTAGATCAAGTGATATGGATAACATGATTCATAAATTGCCATCGAATGCATATACTCATGATTATATGGACAGTGAATCAAAGGTCGTTGATTTGAGTCTCCTTGAGCCTCCAGCTGTTGTGCAAAGAGTCTATCGCTCTGAGAGAATTCCTAGGGGGCAGGAGGAGTTAATGAATCGCTTATCTAAATCTGAGGATGCGCATGGTTCCCAGTTTCTAATCTCTCATTCACAGTCTGATCAGGACCAGATACCAGAATCCACTGTCCAACTGCAAGATAGCAGCAATTGCGAAGCTGAAAATTCCCTTCCCATGGAAAAACCATCACATACTGCTACTAAAGTCAGGGATGATGAGTGTTACCAAATTCAAGATGGCCAAGTATCTTCTGTAAAGAATCATGAGGATTCTGCATTGGGTCTCTTGCAGCTTGACATGGGTGAGGTTGTTGGAATGGGGTGTAAAGACAATAAAATTCTTGAGCAATCTCAGATTGGTTCTAAGGAAGAAAGTTTAATTAACAATGTTACTGAAAAAGCATCCACGGGTAATGTTTCCAAACCGGTGCAAGGAGACATTGTTATAGATATTGTCAATCGATTTTCTCGTGATTTCTTATCCGATATATTCTCCAAAGCAATACCTTCTAAGGATTCATTTGATATTAGCAACCAACTGCACGAAGATGGAACTGGTTTGGGTATTAATGTAGAAAATCATGAACGTAAGGGCTGGTCACATTTCCATAATTTGGCACAAGAAACGTTTGTTCAAAATGATGTTTCTCTTATTGACCAAGATCACATTGGGTTTTCATCTGCTCCCAAGACTGTTGGAGACAATCTTACTCCTTCAACAACTATAATTCATGAAGATTCTCAACTCAATTTCGGTGATGACCAGAAAGTGTTGTATAGGATAAGTGGACACGACACCACCAATTTTCTTTCACGTTATGATCATTCCCGACTGAATGGCGTCGATAGTTCGCAATTTGACGCTATGATGGAAAACCTAAAGACGTTAGAGTATGGGCATGAGGATGCTAAGGTAGAATCTAAGGGCAGTGGCTTACCTCCTCATGATCCTTCTTTGGGAAATTTTGATCCTAATACATTACAGATCATAAAGAACAATGATCTTGAAGAGTTGAAGGAATTGGGTTCTGGAACTTTCGGCACTGTCTATCATGGAAAGTGGAGAGGAACTGATGTTGCAATTAAGAGAATAAAGAAAACTTGCTTTATGGGTCGATCGTCAGAGCTAGAGAGATTGACTGTAGAGTTCTGGAGGGAAGCCGATATTCTTTCAAAACTTCACCATCCCAACGTGGTTGCATTTTATGGTGTTGTGCAAGATGGTCCTGGTGGAACATTAGCTACTGTGACAGAATACATGGTTGATGGTTCCCTTCGACATGTTTTGCTTTCCAAGGATAAGCATCTTGATCGACGTAAGAGGCTAATAATTGCAATGGATGCAGCATTCGGAATGGAATATTTACACTCAAAAAGTATTGTCCATTTTGATTTGAAATGTGATAATTTGCTTGTGAACTTGAAGGATCCTCAAAGACCAATTTGCAAGGTAGCTGATTTTGGCCTGTCAAAGATCAAGCGAAATACCTTGGTGTCTGGTGGTGTAAGAGGAACCCTACCATGGATGGCACCTGAGCTACTAAATGGTAGCAGCAATAAAGTCTCTGAGAAGGTTGATGTGTTCTCTTTCGGTATTGTACTATGGGAGATTCTCACAGGAGAGGAACCATATGCCAACATGCATTATGGGGCTATCATAGGGGGTATTGTGAATAACACATTGAGACCAACCATTCCAAGTTACTGTGATTCTGAATGGAGAAAGTTGATGGAACATTGCTGGGCGCCAAATCCTTCAGATAGGCCATCCTTCACAGAAGTTGCAGGCCGTCTGCGTGTTATGTCAACAGCTGCTGCTAGCCAAACAAAAGCACAAGGTCCCAAAATACCAAGGTCGTAA 3147 40.8 MVFLPWFALQIHQCASTSIAVKFMFVYLAELTIKLSKHDEMEQSSNDQLQCTSMQYGFGELQPASKSSIEDPMSIVNMQSDGRSMDLRMSEVKPVLNYSIQTGEEFAFEFMRDRANSRKPLISDSVSDPNCTSGYMDLKGILGLSRTGSECGSDNSMITSMEKVSCDEDLQNMMEECNEFKDDKGSKKLRIFLFSMSDLDKGSFSMGNVDNDSEIQYVVAVNGMDSVTRKSSNLHGLASFSANNLDEVDGQSIERGTVLKELAGINASALTGNIAPSSLQSSQPVRANAYNAYETFVQTYHEPQGQYPEIPSTKLKGKLNDSFEKEIHPKSGCSSIPSHLFDEKSTPVSMAQGEFPFLTPKNESDLQGSEGLSSMSVSGNPIVSRSSDMDNMIHKLPSNAYTHDYMDSESKVVDLSLLEPPAVVQRVYRSERIPRGQEELMNRLSKSEDAHGSQFLISHSQSDQDQIPESTVQLQDSSNCEAENSLPMEKPSHTATKVRDDECYQIQDGQVSSVKNHEDSALGLLQLDMGEVVGMGCKDNKILEQSQIGSKEESLINNVTEKASTGNVSKPVQGDIVIDIVNRFSRDFLSDIFSKAIPSKDSFDISNQLHEDGTGLGINVENHERKGWSHFHNLAQETFVQNDVSLIDQDHIGFSSAPKTVGDNLTPSTTIIHEDSQLNFGDDQKVLYRISGHDTTNFLSRYDHSRLNGVDSSQFDAMMENLKTLEYGHEDAKVESKGSGLPPHDPSLGNFDPNTLQIIKNNDLEELKELGSGTFGTVYHGKWRGTDVAIKRIKKTCFMGRSSELERLTVEFWREADILSKLHHPNVVAFYGVVQDGPGGTLATVTEYMVDGSLRHVLLSKDKHLDRRKRLIIAMDAAFGMEYLHSKSIVHFDLKCDNLLVNLKDPQRPICKVADFGLSKIKRNTLVSGGVRGTLPWMAPELLNGSSNKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGIVNNTLRPTIPSYCDSEWRKLMEHCWAPNPSDRPSFTEVAGRLRVMSTAAASQTKAQGPKIPRS 1048
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 7264664 7271634 - Cp4.1LG16g07090.1 Cpe16g00711 483086
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe16g00711 1048 MobiDBLite consensus disorder prediction 476 491 - -
Cpe16g00711 1048 Gene3D Transferase(Phosphotransferase) domain 1 852 1044 - -
Cpe16g00711 1048 Pfam Protein tyrosine and serine/threonine kinase 765 1026 IPR001245 GO:0004672|GO:0006468
Cpe16g00711 1048 SMART serkin_6 764 1030 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe16g00711 1048 SUPERFAMILY Protein kinase-like (PK-like) 754 1025 IPR011009 -
Cpe16g00711 1048 PANTHER SERINE-THREONINE PROTEIN KINASE 164 254 - -
Cpe16g00711 1048 MobiDBLite consensus disorder prediction 476 499 - -
Cpe16g00711 1048 CDD STKc_MAP3K-like 770 1027 - -
Cpe16g00711 1048 PANTHER PROTEIN KINASE, PUTATIVE-RELATED 510 1045 - -
Cpe16g00711 1048 ProSitePatterns Serine/Threonine protein kinases active-site signature. 889 901 IPR008271 GO:0004672|GO:0006468
Cpe16g00711 1048 PRINTS Tyrosine kinase catalytic domain signature 998 1020 IPR001245 GO:0004672|GO:0006468
Cpe16g00711 1048 PRINTS Tyrosine kinase catalytic domain signature 846 859 IPR001245 GO:0004672|GO:0006468
Cpe16g00711 1048 PRINTS Tyrosine kinase catalytic domain signature 883 901 IPR001245 GO:0004672|GO:0006468
Cpe16g00711 1048 PRINTS Tyrosine kinase catalytic domain signature 954 976 IPR001245 GO:0004672|GO:0006468
Cpe16g00711 1048 PANTHER PROTEIN KINASE, PUTATIVE-RELATED 164 254 - -
Cpe16g00711 1048 ProSiteProfiles Protein kinase domain profile. 764 1029 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe16g00711 1048 PANTHER SERINE-THREONINE PROTEIN KINASE 510 1045 - -
Cpe16g00711 1048 PANTHER SERINE-THREONINE PROTEIN KINASE 375 508 - -
Cpe16g00711 1048 ProSitePatterns Protein kinases ATP-binding region signature. 770 795 IPR017441 GO:0005524
Cpe16g00711 1048 Gene3D Phosphorylase Kinase; domain 1 757 851 - -
Cpe16g00711 1048 PANTHER PROTEIN KINASE, PUTATIVE-RELATED 375 508 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe08g00383 Cpe-Chr8:2396973 Cpe16g00711 Cpe-Chr16:7264664 2.84E-158 dispersed
Cpe09g00929 Cpe-Chr9:8355473 Cpe16g00711 Cpe-Chr16:7264664 0 dispersed
Cpe11g00598 Cpe-Chr11:3580815 Cpe16g00711 Cpe-Chr16:7264664 1.99E-136 dispersed
Cpe16g00711 Cpe-Chr16:7264664 Cpe20g00270 Cpe-Chr20:1514288 4.83E-15 dispersed
Cpe18g00543 Cpe-Chr18:6006405 Cpe16g00711 Cpe-Chr16:7264664 8.39E-06 transposed
Cpe16g00711 Cpe-Chr16:7264664 Cpe05g01037 Cpe-Chr5:6804613 6.44E-49 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
62908 PF07714 PK_Tyr_Ser-Thr 1.30E-62 CL0016 Cpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe16g00711 - - csv:101203233 1231.47