Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe16g00717 ATGTTCTTTTCCGGAAGTTACTGGAAAGATTTGTCGAACTCATGGGAGGGTGGCAATCAAATGTTTCTTTGGCCATGGGTGTTGGGGTTAGACATTTGCCCTTGTATTTGTTCTTGGCTATGCAATTGTTGGGCATTTGATGAGCCCTGTTGTTTTCATCTTACTAAGCTTTACACGGGGATATACTGTCGTGATATGGATATGAATATGGAGAATTTATCATCTAGTGATCCGTCGCATCAGGCGATGTATGAAAATAGTGATTCGAAACACTCACAGGATGGGTTGGAGGATGGTTCTCAATGGTATTTTTCTAGGAGGGAATTAGAAGAAAATTCTCCTTCTAAACAAGATGGGATTGACTTGAAAAAGGAGGCATATCTACGCAAATCGTACTGTACATTCCTCCAAGATTTGGGAATGAGACTTAAAGTTCCCCAGGTAACCATTGCTACAGCAATAATATTTTGTCATAGGTTCTTTCTTCGGCAGTCTCATGCAAAGAATGACCGAAGGACAATTGCGACAGTGTGTATGTTTCTCGCAGGAAAGGTTGAAGAAACCCCGCGTCCATTGAAGGATGTTATTATGGTCTCATATGAAATCATCAACAAGAAGGATCCTACTGCAGCCCAGAAAATTAGACAAAAGGAGGTGTATGAACGGCAAAAAGAGTTAATTTTACTTGGGGAGAGGGTTGTTCTCGCAACTCTTGGTTTTGATCTTAACGTGCACCATCCCTACAAACCCCTCGTTGAGGCAATTAAAAAATTCAAAGTTGCTCAAAATGCCTTGGCTCAAGTAGCTTGGAATTTCGTCAATGATGGATTGCGGACATCTCTTTGCTTGCAATTTAAGCCTCACCATATTGCGGCTGGTGCCATTTTCCTTGCTGCCAAATTTCTCAAAGTTAAACTCCCATCAGATGGGGAAAAGTGCACCAGAAACTGGTTCTGCATTGAACTTCGTTTTGTTGAAGTACTCGCTGAAACATTCGCCTTCGTTCCTAGATCTCGTGTTGAGAAAAATTTACATTTTAAGCCAGGCAAAAAAGTCAGCAACCAAATGTTAGAGCTTTATGAACAGAATCGATTGCCTTCTGGTGAAGCTGATGGAAGCATTGGAGGTGGTCCTTCCAATCAAACCTCAATAAAAGCTCCCTCGAACAGCGAAGAACGTGCTGTAGCGGACAATCATGCACTTGGTGCGGGTCTTGCTACTTCAAGACTTGGAACCTCAAAAGCTAGTTCATCTAGGCCAGCTTCTGAACACTCATTTGCAGGTGACCAGCCATCGAGAGCAATGCGGAATCATAGTATCGAAAGTTCGAATGTAGATTTTAGAAACCCTTCCAATCACAATACAGGTAGTGAATCTAAGGTTAGACAGGAGATGGAGACATCGGCTTTCCATGACAAGGGAAATGCTCAAAACTCGCTAAGGCATCAGTCTGAGGGATTGGTTGGGCAAGACCATGGAAATGATATGAAATCAAAGGAAACAACAAGGGATTCAATGGAACTGAAAGACAAACATGTAATTCGAAATACAGATCTTAGAGAAGGTACACTCGGTAAATCTCAGGACGCTATCAAAAAGATCGACAAGGACAAAGTAAAGGCTGCACTCGAAAAACGAAGGAAGTCTCTCGGCAGCATGACCCAGAAAAAAGAATTAATGGATGAAGATGATCTGATTGAAAGGGAGTTGGAAGCTGGTGTTGAGATGGCTGCTGGGAGTGAGAAAAACAAGCGAGAACAGAGGCAAAGTTGGAATTCTAGCAAAATGGAAGAAGGGGAGTTCACAAATGCTCACCATGCTGGCTATGAACATCAAGATTCCCCAAAGTTGAACAGTTCCCTTAATTTTCCTCTTCGAACCGTCATAGCTTCGTTTCGGAATTCTTTTCGTCTCATTTCTGCTGTTGAATCCTCAACCTCCGCTTCTCTGTCTGTAATTCATAGAGAGAGATCGAGTATGTCGCAGAGCAATGGGCCTGATTTCAACCTACCTGATGAGATTTTGGCGGTGATTCCAACGGATCCATACGATCAGCTCGATCTTGCGCGAAAAATCACCTCCATGGCGATTGCCTCTCGTGTGTCGAATCTTGAAGCAGACATGGTAAGGATGAAGCAAAAGCTTAACGAGAAGGAAATAACCATCTACGACCTGCAGAAGAAGTTGTCTCACCTGGAGCACGCGAACCAGGAAGCTGAATCTAGGTTGAAGATCGCGCTTGATGATAATACGAGGCTTTCCATGGAAAGGGATGCACTATCAATGACTTCAAAGAAACTTGGACGTGATTTGGCAAAGGAGGTGTATGAACGGCAAAAAGAGTTAATTTTACTTGGGGAGAGGGTTGTTCTCGCAACTCTTGGTTTTGATCTTAACGTGCACCATCCCTACAAACCCCTCGTTGAGGCAATTAAAAAATTCAAAGTTGCTCAAAATGCCTTGGCTCAAGTAGCTTGGAATTTCGTCAATGATGGATTGCGGACATCTCTTTGCTTGCAATTTAAGCCTCACCATATTGCGGCTGGTGCCATTTTCCTTGCTGCCAAATTTCTCAAAGTTAAACTCCCATCAGATGGGGAAAAGGTGTGGTGGCAAGAGTTTGATGTCACCCCACGGCAATTGGAGGTACTCGCTGAAACATTCGCCTTCGTTCCTAGATCTCGTGTTGAGAAAAATTTACATTTTAAGCCAGGCAAAAAAGTCAGCAACCAAATGTTAGAGCTTTATGAACAGAATCGATTGCCTTCTGGTGAAGCTGATGGAAGCATTGGAGGTGGTCCTTCCAATCAAACCTCAATAAAAGCTCCCTCGAACAGCGAAGAACGTGCTGTAGCGGACAATCATGCACTTGGTGCGGGTCTTGCTACTTCAAGACTTGGAACCTCAAAAGCTAGTTCATCTAGGCCAGCTTCTGAACACTCATTTGCAGGTGACCAGCCATCGAGAGCAATGCGGAATCATAGTATCGAAAGTTCGAATGTAGATTTTAGAAACCCTTCCAATCACAATACAGGTAGTGAATCTAAGGTTAGACAGGAGATGGAGACATCGGCTTTCCATGACAAGGGAAATGCTCAAAACTCGCTAAGGCATCAGTCTGAGGGATTGGTTGGGCAAGACCATGGAAATGATATGAAATCAAAGGAAACAACAAGGGATTCAATGGAACTGAAAGACAAACATGTAATTCGAAATACAGATCTTAGAGAAGGTACACTCGGTAAATCTCAGGACGCTATCAAAAAGATCGACAAGGACAAAGTAAAGGCTGCACTCGAAAAACGAAGGAAGTCTCTCGGCAGCATGACCCAGAAAAAAGAATTAATGGATGAAGATGATCTGATTGAAAGGGAGTTGGAAGCTGGTGTTGAGATGGCTGCTGGGAGTGAGAAAAACAAGCGAGAACAGAGGCAAAGTTGGAATTCTAGCAAAATGGAAGAAGGGGAGTTCACAAATGCTCACCATGCTGGCTATGAACATCAAGATTCCCCAAAGTTGAACAGTTCCCTTAATTTTCCTCTTCGAACCGTCATAGCTTCGTTTCGGAATTCTTTTCGTCTCATTTCTGCTGTTGAATCCTCAACCTCCGCTTCTCTGTCTGTAATTCATAGAGAGAGATCGAGTATGTCGCAGAGCAATGGGCCTGATTTCAACCTACCTGATGAGATTTTGGCGGTGATTCCAACGGATCCATACGATCAGCTCGATCTTGCGCGAAAAATCACCTCCATGGCGATTGCCTCTCGTGTGTCGAATCTTGAAGCAGACATGGTAAGGATGAAGCAAAAGCTTAACGAGAAGGAAATAACCATCTACGACCTGCAGAAGAAGTTGTCTCACCTGGAGCACGCGAACCAGGAAGCTGAATCTAGGTTGAAGATCGCGCTTGATGATAATACGAGGCTTTCCATGGAAAGGGATGCACTATCAATGACTTCAAAGAAACTTGGACGTGATTTGGCAAAGCTGGAGACGTTTAAGCGACAACTTATGCTATCATTGAATGATGAATCCTCTCAAACAGAAACTGTTGATATTGGGACCTGTGATCAAGCAGTTCCTAAAGCATATACTGACAAGGATGAGGTAACTGATGGACACGCCACGCGTTCTTTCGGTGGTTCTACGGAGACGAGAAACACAATAGATGAAGGAAAACATCTTGGACAAAGATTTTCATCGCTGCATATCACCCCAAGGTTCACTCCATCTGCGACTCCAAAAACTATTTCAAAGAGTGTATCCCCCAGAGGGTATTCCTCCGTTGCTTCGCCACAGATAACATCTGGTTCAACTTCTCCAACAAAACTCTCATATGATGGACGAATCGCACTATCTCCGTGGTACCCGTCAAGCCAGCAGTCTTCAGCAGCAAGTTCTCCTCCTCGTTCTCGTCCATTGGCCGGTCGCGCTGCTCGAGTTGATGGCAAGGAATTTTTCCGCCTTGCCAGGAGTCGTCTGTCATACGAGCAGTTTAGTGCCTTCCTTTCAAACATAAAAGAACTCAATTCTCAAAAGCAGACTAGAGAGGAAACTTTAAGAAAAGCAGAAGAGATATTTGGGACAGATAACAAAGATCTTTTTCTGTCATTTCAAGGATTGCTTAACCGCAATATTCACTAG 4644 43.6 MFFSGSYWKDLSNSWEGGNQMFLWPWVLGLDICPCICSWLCNCWAFDEPCCFHLTKLYTGIYCRDMDMNMENLSSSDPSHQAMYENSDSKHSQDGLEDGSQWYFSRRELEENSPSKQDGIDLKKEAYLRKSYCTFLQDLGMRLKVPQVTIATAIIFCHRFFLRQSHAKNDRRTIATVCMFLAGKVEETPRPLKDVIMVSYEIINKKDPTAAQKIRQKEVYERQKELILLGERVVLATLGFDLNVHHPYKPLVEAIKKFKVAQNALAQVAWNFVNDGLRTSLCLQFKPHHIAAGAIFLAAKFLKVKLPSDGEKCTRNWFCIELRFVEVLAETFAFVPRSRVEKNLHFKPGKKVSNQMLELYEQNRLPSGEADGSIGGGPSNQTSIKAPSNSEERAVADNHALGAGLATSRLGTSKASSSRPASEHSFAGDQPSRAMRNHSIESSNVDFRNPSNHNTGSESKVRQEMETSAFHDKGNAQNSLRHQSEGLVGQDHGNDMKSKETTRDSMELKDKHVIRNTDLREGTLGKSQDAIKKIDKDKVKAALEKRRKSLGSMTQKKELMDEDDLIERELEAGVEMAAGSEKNKREQRQSWNSSKMEEGEFTNAHHAGYEHQDSPKLNSSLNFPLRTVIASFRNSFRLISAVESSTSASLSVIHRERSSMSQSNGPDFNLPDEILAVIPTDPYDQLDLARKITSMAIASRVSNLEADMVRMKQKLNEKEITIYDLQKKLSHLEHANQEAESRLKIALDDNTRLSMERDALSMTSKKLGRDLAKEVYERQKELILLGERVVLATLGFDLNVHHPYKPLVEAIKKFKVAQNALAQVAWNFVNDGLRTSLCLQFKPHHIAAGAIFLAAKFLKVKLPSDGEKVWWQEFDVTPRQLEVLAETFAFVPRSRVEKNLHFKPGKKVSNQMLELYEQNRLPSGEADGSIGGGPSNQTSIKAPSNSEERAVADNHALGAGLATSRLGTSKASSSRPASEHSFAGDQPSRAMRNHSIESSNVDFRNPSNHNTGSESKVRQEMETSAFHDKGNAQNSLRHQSEGLVGQDHGNDMKSKETTRDSMELKDKHVIRNTDLREGTLGKSQDAIKKIDKDKVKAALEKRRKSLGSMTQKKELMDEDDLIERELEAGVEMAAGSEKNKREQRQSWNSSKMEEGEFTNAHHAGYEHQDSPKLNSSLNFPLRTVIASFRNSFRLISAVESSTSASLSVIHRERSSMSQSNGPDFNLPDEILAVIPTDPYDQLDLARKITSMAIASRVSNLEADMVRMKQKLNEKEITIYDLQKKLSHLEHANQEAESRLKIALDDNTRLSMERDALSMTSKKLGRDLAKLETFKRQLMLSLNDESSQTETVDIGTCDQAVPKAYTDKDEVTDGHATRSFGGSTETRNTIDEGKHLGQRFSSLHITPRFTPSATPKTISKSVSPRGYSSVASPQITSGSTSPTKLSYDGRIALSPWYPSSQQSSAASSPPRSRPLAGRAARVDGKEFFRLARSRLSYEQFSAFLSNIKELNSQKQTREETLRKAEEIFGTDNKDLFLSFQGLLNRNIH 1547
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 7303726 7318010 + Cp4.1LG16g07240.1 Cpe16g00717 483092
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe16g00717 1547 MobiDBLite consensus disorder prediction 965 981 - -
Cpe16g00717 1547 MobiDBLite consensus disorder prediction 74 89 - -
Cpe16g00717 1547 PANTHER CYCLIN 907 1170 IPR043198 GO:0006357|GO:0016538
Cpe16g00717 1547 MobiDBLite consensus disorder prediction 1133 1153 - -
Cpe16g00717 1547 CDD CYCLIN 243 304 IPR013763 -
Cpe16g00717 1547 MobiDBLite consensus disorder prediction 409 425 - -
Cpe16g00717 1547 MobiDBLite consensus disorder prediction 1365 1443 - -
Cpe16g00717 1547 CDD CYCLIN 799 860 IPR013763 -
Cpe16g00717 1547 PANTHER - 907 1170 - -
Cpe16g00717 1547 PANTHER - 772 884 - -
Cpe16g00717 1547 MobiDBLite consensus disorder prediction 991 1019 - -
Cpe16g00717 1547 MobiDBLite consensus disorder prediction 1457 1478 - -
Cpe16g00717 1547 CDD CYCLIN 128 199 IPR013763 -
Cpe16g00717 1547 SUPERFAMILY Cyclin-like 99 244 IPR036915 -
Cpe16g00717 1547 SMART cyclin_7 134 236 IPR013763 -
Cpe16g00717 1547 SMART cyclin_7 249 330 IPR013763 -
Cpe16g00717 1547 SMART cyclin_7 805 885 IPR013763 -
Cpe16g00717 1547 MobiDBLite consensus disorder prediction 435 463 - -
Cpe16g00717 1547 Gene3D - 244 369 - -
Cpe16g00717 1547 Gene3D - 93 242 - -
Cpe16g00717 1547 MobiDBLite consensus disorder prediction 922 951 - -
Cpe16g00717 1547 MobiDBLite consensus disorder prediction 965 1062 - -
Cpe16g00717 1547 Coils Coil 1257 1312 - -
Cpe16g00717 1547 MobiDBLite consensus disorder prediction 74 96 - -
Cpe16g00717 1547 SUPERFAMILY Cyclin-like 245 319 IPR036915 -
Cpe16g00717 1547 Gene3D - 784 927 - -
Cpe16g00717 1547 MobiDBLite consensus disorder prediction 409 506 - -
Cpe16g00717 1547 Coils Coil 701 756 - -
Cpe16g00717 1547 PANTHER CYCLIN 70 613 IPR043198 GO:0006357|GO:0016538
Cpe16g00717 1547 PANTHER CYCLIN 772 884 IPR043198 GO:0006357|GO:0016538
Cpe16g00717 1547 SUPERFAMILY Cyclin-like 801 887 IPR036915 -
Cpe16g00717 1547 MobiDBLite consensus disorder prediction 374 389 - -
Cpe16g00717 1547 MobiDBLite consensus disorder prediction 1048 1062 - -
Cpe16g00717 1547 MobiDBLite consensus disorder prediction 1402 1443 - -
Cpe16g00717 1547 MobiDBLite consensus disorder prediction 470 485 - -
Cpe16g00717 1547 Pfam Cyclin, N-terminal domain 107 243 IPR006671 -
Cpe16g00717 1547 PANTHER - 70 613 - -
Cpe16g00717 1547 MobiDBLite consensus disorder prediction 492 506 - -
Cpe16g00717 1547 MobiDBLite consensus disorder prediction 930 945 - -
Cpe16g00717 1547 Coils Coil 1506 1526 - -
Cpe16g00717 1547 MobiDBLite consensus disorder prediction 1026 1041 - -
Cpe16g00717 1547 MobiDBLite consensus disorder prediction 577 597 - -
Cpe16g00717 1547 MobiDBLite consensus disorder prediction 367 395 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe05g01557 Cpe-Chr5:10694144 Cpe16g00717 Cpe-Chr16:7303726 6.62E-58 dispersed
Cpe05g01571 Cpe-Chr5:10806495 Cpe16g00717 Cpe-Chr16:7303726 4.41E-06 dispersed
Cpe08g00225 Cpe-Chr8:1503524 Cpe16g00717 Cpe-Chr16:7303726 7.36E-18 dispersed
Cpe09g00702 Cpe-Chr9:6217731 Cpe16g00717 Cpe-Chr16:7303726 7.62E-105 dispersed
Cpe12g00241 Cpe-Chr12:1620346 Cpe16g00717 Cpe-Chr16:7303726 3.89E-17 dispersed
Cpe16g00717 Cpe-Chr16:7303726 Cpe17g00109 Cpe-Chr17:666567 4.31E-18 dispersed
Cpe18g00064 Cpe-Chr18:1645596 Cpe16g00717 Cpe-Chr16:7303726 5.47E-14 dispersed
Cpe16g00717 Cpe-Chr16:7303726 Cpe20g00592 Cpe-Chr20:3612268 3.71E-110 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe16g00717 K15188 - csv:101220862 889.026