Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe16g00722 ATGACAGGTGTGAAGTTTACAGCCGAGGAGCTTCGTAGGATTATGGACTACAAGCATAACATTCGTAACATGTCTGTTATTGCTCATGTCGATCATGGGAAGTCCACTCTTACAGATTCTCTTGTGGCTGCTGCCGGTATCATTGCTCAAGAAGTTGCAGGTGATGTTCGGATGACGGATACCCGACAAGATGAGGCAGAACGGGGTATCACTATCAAGTCGACTGGAATCTCCCTCTACTATGAAATGTCTGATGAATCATTGAAAAGTTACAAGGGAGAGAGGAATGGAAATGAGTACCTTATCAATCNATTTCCTTATATGACAATCATCTTTTTATATGGTAATGAATAA 354 41.24 MTGVKFTAEELRRIMDYKHNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRQDEAERGITIKSTGISLYYEMSDESLKSYKGERNGNEYLINXFPYMTIIFLYGNE 117
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 7346603 7348112 + Cp4.1LG16g07280.1 Cpe16g00722 483097
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe16g00722 117 PRINTS GTP-binding elongation factor signature 23 36 IPR000795 GO:0003924|GO:0005525
Cpe16g00722 117 PRINTS GTP-binding elongation factor signature 67 75 IPR000795 GO:0003924|GO:0005525
Cpe16g00722 117 ProSitePatterns Translational (tr)-type guanine nucleotide-binding (G) domain signature. 60 75 IPR031157 -
Cpe16g00722 117 PANTHER TRANSLATION ELONGATION FACTOR-RELATED 4 104 - -
Cpe16g00722 117 Gene3D - 5 105 IPR027417 -
Cpe16g00722 117 PANTHER TRANSLATION ELONGATION FACTOR EF-2 SUBUNIT 4 104 - -
Cpe16g00722 117 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 6 103 IPR027417 -
Cpe16g00722 117 Pfam Elongation factor Tu GTP binding domain 19 103 IPR000795 GO:0003924|GO:0005525
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe16g00722 Cpe-Chr16:7346603 Cpe16g00734 Cpe-Chr16:7426468 1.09E-63 dispersed
Cpe16g00721 Cpe-Chr16:7345143 Cpe16g00722 Cpe-Chr16:7346603 2.00E-46 tandem
Cpe16g00722 Cpe-Chr16:7346603 Cpe16g00723 Cpe-Chr16:7348748 1.68E-62 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe16g00722 K03234 - cpep:111777070 225.328