Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe16g00723 ATGACAGGTGTGAAGTTTACAGCCGAGGAGCTTCGTAGGATTATGGACTACAAGCATAACATTCGTAACATGTCTGTTATTGCTCATGTCGATCATGGGAAGTCCACTCTTACAGATTCTCTTGTGGCTGCTGCCGGTATCATTGCTCAAGAAGTTGCAGGTGATGTTCGGATGACGGATACCCGACAAGATGAGGCAGAACGGGGTATCACTATCAAGTCGACTGGAATCTCCCTCTACTATGAAATGTCTGATGAATCATTGAAAAGTTACAAGGGAGAGAGGAATGGAAATGAGTACCTTATCAATCTTATCGATTCGCCTGGGCATGTCGACTTCTCGTCTGAGGTTACAGCTGCTCTACGTATTACCGATGGTGCCCTTGTGGTGGTGAAGTTTACAGCCGAGGAGCTTCGTAGGATTATGGACTACAAGCATAACATTCGTAACATGTCTGTTATTGCTCATGTCGATCATGGGAAGTCCACTCTTACAGATTCTCTTGTGGCTGCTGCCGGTATCATTGCTCAAGAAGTTGCAGGTGATGTTCGGATGACGGATACCCGACAAGATGAGGCAGAACGGGGTATCACTATCAAGTCGACTGGAATCTCCCTCTACTATGAAATGTCTGATGAATCATTGAAAAGTTACAAGGGAGAGAGGAATGGAAATGAGTACCTTATCAATCTTATCGATTCGCCTGGGCATGTCGACTTCTCGTCTGAGGTTACAGCTGCTCTACGTATTACCGATGGTGCCCTTGTGGTGGTGGATTGTGTTGAAGGTGTCTGTGTCCAAACGGAGACAGTGCTTCGTCAGGCGTTGGGAGAGAGGATTCGACCTGTGTTGACTGTTAACAAGATGGACAGGTGCTTCCTTGAGCTTCAAGTAGATGGCGAAGAGGCTTACCAGACCTTCCAGAGAGTTATTGAGAATGCTAATGTGATCATGGCTACATATGAGGATCCACTTCTTGGTGATGTGCAAGTGTACCCTGAGAAGGGAACAGTTGCTTTCTCTGCTGGTTTGCACGGTTGGGCTTTCACCCTGACCAACTTTGCAAAGATGTACGCCTCTAAATTTGGAGTGGATGAGTCAAAAATGATGGAGAGGCTTTGGGGCGAGAACTTCTTCGACCCTGCCACCAAGAAATGGACCAGCAAGAACACTGGATCTGGAACATGCAAGCGTGGATTTGTTCAGTTCTGCTATGAACCTATCAAGCAGATTATTGCTACTTGCATGAATGACCAGAAGGACAAGCTATGGCCTATGTTGCAGAAGCTTGGAGTTGTCATGAAATCTGAAGAGAAGGATCTTATGGGTAAAGCATTGATGAAGCGAGTCATGCAAACATGGCTCCCAGCTAGCAGTGCTCTTTTGGAAATGATGATCTTTCATCTCCCTTCCCCAGCCACGGCACAAAAGTATCGTGTTGAGAACTTGTATGAAGGTCCACTAGACGATGCTTATGCTAGTGCCATCAGAAATTGTGACCCTGAGGGACCTCTTATGCTTTATGTATCAAAGATGATTCCTGCATCGGACAAGGGCAGGTTCTTTGCCTTTGGTCGTGTCTTCTCTGGGAAGGTTTCAACTGGTTTGAAAGTTAGAATCATGGGTCCAAACTATGTCCCTGGAGAGAAGAAAGACTTGTATGTGAAGAGTGTCCAGAGAACTGTCATTTGGATGGGAAAGAAGCAAGAAACAGTGGAGGATGTGCCTTGTGGTAATACGGTTGCCATGGTTGGGTTGGATCAATTTATCACCAAGAATGCTACTCTGACAAATGAGAAGGAAGTTGATGCTCATCCAATCCGAGCCATGAAATTTTCTGTATCTCCTGTGGTGCGTGTGGCTGTTCAGTGTAAGGTGGCATCTGATCTTCCCAAGCTTGTGGAAGGCCTTAAACGTTTGGCTAAGTCAGACCCTATGGTCGTGTGTTCCATGGAGGAATCTGGTGAGCACATTGTCGCTGGTGCTGGAGAGCTACATCTTGAGATCTGTCTGAAGGATTTGCAAGATGATTTCATGGGTGGAGCTGAAATCATAAAATCTGACCCTGTTGTCTCTTTCCGTGAAACTGTCCTTGAGAGGTCATGCCGCACAGTGATGAGCAAATCCCCCAACAAACACAATCGTCTGTACATGGAAGCACGACCCCTGGAGGAAGGACTGGCAGAGGCTATTGACGATGGTCGCATAGGCCCACGAGATGATCCTAAAATTCGGTCTAAAATTTTGGCGGAGGAGTTTGGTTGGGACAAGGATCTCGCGAAGAAGATTTGGTGCTTTGGTCCTGAGACTACTGGCCCCAACATGGTGGTTGATATGTGTAAGGGAGTTCAATACCTGAATGAAATCAAGGACTCCGTGGTGGCAGGTTTCCAATGGGCGTCTAAAGAAGGTGCGTTGTCTGAAGAAAACATGAGAGGCATCTGTTTTGAAGTGTGTGATGTGGTTCTTCATGCTGATGCCATCCACAGAGGAGGTGGTCAAGTTATTCCCACAGCTAGGAGGGTGATTTACGCATCTCAGTTGACAGCCAAACCCAGACTTCTTGAGCCAGTGTACCTGGTGGAAATTCAGGCCCCGGAGCAAGCTTTGGGAGGTATTTACAGTGTTCTTAACCAGAAGCGTGGACATGTGTTCGAGGAAATGCAGAGGCCTGGTACCCCTCTCTACAACATCAAGGCATATCTCCCTGTCATTGAGTCGTTCGGATTCTCGAGCACTCTGAGAGCTGCAACTTCTGGCCAGGCTTTCCCTCAGTGTGTGTTTGACCATTGGGACATGATGTCCTCAGATCCATTAGAAAGTGGCTCCCAAGCTGCACAGTTGGTTGCTGATATCCGTAAGAGGAAGGGATTGAAGGAGCAGATGACTCCATTGTCAGAACTTGTCAAGATGGTGAAGTTTACAGCCGAGGAGCTTCGTAGGATTATGGACTACAAGCATAACATTCGTAACATGTCTGTTATTGCTCATGTCGATCATGGGAAGTCCACTCTTACAGATTCTCTTGTGGCTGCTGCCGGTATCATTGCTCAAGAAGTTGCAGGTGATGTTCGGATGACGGATACCCGACAAGATGAGGCAGAACGGGGTATCACTATCAAGTCGACTGGAATCTCCCTCTACTATGAAATGTCTGATGAATCATTGAAAAGTTACAAGGGAGAGAGGAATGGAAATGAGTACCTTATCAATCTTATCGATTCGCCTGGGCATGTCGACTTCTCGTCTGAGGTTACAGCTGCTCTACGTATTACCGATGGTGCCCTTGTGGTGGTGGATTGTGTTGAAGGTGTCTGTGTCCAAACGGAGACAGTGCTTCGTCAGGCGTTGGGAGAGAGGATTCGACCTGTGTTGACTGTTAACAAGATGGACAGGTGCTTCCTTGAGCTTCAAGTAGATGGCGAAGAGGCTTACCAGACCTTCCAGAGAGTTATTGAGAATGCTAATGTGATCATGGCTACATATGAGGATCCACTTCTTGGTGATGTGCAAGTGTACCCTGAGAAGGGAACAGTTGCTTTCTCTGCTGGTTTGCACGGTTGGGCTTTCACCCTGACCAACTTTGCAAAGATGTACGCCTCTAAATTTGGAGTGGATGAGTCAAAAATGATGGAGAGGCTTTGGGGCGAGAACTTCTTCGACCCTGCCACCAAGAAATGGACCAGCAAGAACACTGGATCTGGAACATGCAAGCGTGGATTTGTTCAGTTCTGCTATGAACCTATCAAGCAGATTATTGCTACTTGCATGAATGACCAGAAGGACAAGCTATGGCCTATGTTGCAGAAGCTTGGAGTTGTCATGAAATCTGAAGAGAAGGATCTTATGGGTAAAGCATTGATGAAGCGAGTCATGCAAACATGGCTCCCAGCTAGCAGTGCTCTTTTGGAAATGATGATCTTTCATCTCCCTTCCCCAGCCACGGCACAAAAGTATCGTGTTGAGAACTTGTATGAAGGTCCACTAGACGATGCTTATGCTAGTGCCATCAGAAATTGTGACCCTGAGGGACCTCTTATGCTTTATGTATCAAAGATGATTCCTGCATCGGACAAGGGCAGGTTCTTTGCCTTTGGTCGTGTCTTCTCTGGGAAGGTTTCAACTGGTTTGAAAGTTAGAATCATGGGTCCAAACTATGTCCCTGGAGAGAAGAAAGACTTGTATGTGAAGAGTGTCCAGAGAACTGTCATTTGGATGGGAAAGAAGCAAGAAACAGTGGAGGATGTGCCTTGTGGTAATACGGTTGCCATGGTTGGGTTGGATCAATTTATCACCAAGAATGCTACTCTGACAAATGAGAAGGAAGTTGATGCTCATCCAATCCGAGCCATGAAATTTTCTGTATCTCCTGTGGTGCGTGTGGCTGTTCAGTGTAAGGTGGCATCTGATCTTCCCAAGCTTGTGGAAGGCCTTAAACGTTTGGCTAAGTCAGACCCTATGGTCGTGTGTTCCATGGAGGAATCTGGTGAGCACATTGTCGCTGGTGCTGGAGAGCTACATCTTGAGATCTGTCTGAAGGATTTGCAAGATGATTTCATGGGTGGAGCTGAAATCATAAAATCTGACCCTGTTGTCTCTTTCCGTGAAACTGTCCTTGAGAGGTCATGCCGCACAGTGATGAGCAAATCCCCCAACAAACACAATCGTCTGTACATGGAAGCACGACCCCTGGAGGAAGGACTGGCAGAGGCTATTGACGATGGTCGCATAGGCCCACGAGATGATCCTAAAATTCGGTCTAAAATTTTGGCGGAGGAGTTTGGTTGGGACAAGGATCTCGCGAAGAAGATTTGGTGCTTTGGTCCTGAGACTACTGGCCCCAACATGGTGGTTGATATGTGTAAGGGAGTTCAATACCTGAATGAAATCAAGGACTCCGTGGTGGCAGGTTTCCAATGGGCGTCTAAAGAAGGTGCGTTGTCTGAAGAAAACATGAGAGGCATCTGTTTTGAAGTGTGTGATGTGGTTCTTCATGCTGATGCCATCCACAGAGGAGGTGGTCAAGTTATTCCCACAGCTAGGAGGGTGATTTACGCATCTCAGTTGACAGCCAAACCCAGACTTCTTGAGCCAGTGTACCTGGTGGAAATTCAGGCCCCGGAGCAAGCTTTGGGAGGTATTTACAGTGTTCTTAACCAGAAGCGTGGACATGTGTTCGAGGAAATGCAGAGGCCTGGTACCCCTCTCTACAACATCAAGGCATATCTCCCTGTCATTGAGTCGTTCGGATTCTCGAGCACTCTGAGAGCTGCAACTTCTGGCCAGGCTTTCCCTCAGTGTGTGTTTGACCATTGGGACATGATGTCCTCAGATCCATTAGAAAGTGGCTCCCAAGCTGCACAGTTGGTTGCTGATATCCGTAAGAGGAAGGGATTGAAGGAGCAGATGACTCCATTGTCAGAGTTCGAAGACAAGCTTTAA 5442 47.06 MTGVKFTAEELRRIMDYKHNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRQDEAERGITIKSTGISLYYEMSDESLKSYKGERNGNEYLINLIDSPGHVDFSSEVTAALRITDGALVVVKFTAEELRRIMDYKHNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRQDEAERGITIKSTGISLYYEMSDESLKSYKGERNGNEYLINLIDSPGHVDFSSEVTAALRITDGALVVVDCVEGVCVQTETVLRQALGERIRPVLTVNKMDRCFLELQVDGEEAYQTFQRVIENANVIMATYEDPLLGDVQVYPEKGTVAFSAGLHGWAFTLTNFAKMYASKFGVDESKMMERLWGENFFDPATKKWTSKNTGSGTCKRGFVQFCYEPIKQIIATCMNDQKDKLWPMLQKLGVVMKSEEKDLMGKALMKRVMQTWLPASSALLEMMIFHLPSPATAQKYRVENLYEGPLDDAYASAIRNCDPEGPLMLYVSKMIPASDKGRFFAFGRVFSGKVSTGLKVRIMGPNYVPGEKKDLYVKSVQRTVIWMGKKQETVEDVPCGNTVAMVGLDQFITKNATLTNEKEVDAHPIRAMKFSVSPVVRVAVQCKVASDLPKLVEGLKRLAKSDPMVVCSMEESGEHIVAGAGELHLEICLKDLQDDFMGGAEIIKSDPVVSFRETVLERSCRTVMSKSPNKHNRLYMEARPLEEGLAEAIDDGRIGPRDDPKIRSKILAEEFGWDKDLAKKIWCFGPETTGPNMVVDMCKGVQYLNEIKDSVVAGFQWASKEGALSEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYLVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVIESFGFSSTLRAATSGQAFPQCVFDHWDMMSSDPLESGSQAAQLVADIRKRKGLKEQMTPLSELVKMVKFTAEELRRIMDYKHNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRQDEAERGITIKSTGISLYYEMSDESLKSYKGERNGNEYLINLIDSPGHVDFSSEVTAALRITDGALVVVDCVEGVCVQTETVLRQALGERIRPVLTVNKMDRCFLELQVDGEEAYQTFQRVIENANVIMATYEDPLLGDVQVYPEKGTVAFSAGLHGWAFTLTNFAKMYASKFGVDESKMMERLWGENFFDPATKKWTSKNTGSGTCKRGFVQFCYEPIKQIIATCMNDQKDKLWPMLQKLGVVMKSEEKDLMGKALMKRVMQTWLPASSALLEMMIFHLPSPATAQKYRVENLYEGPLDDAYASAIRNCDPEGPLMLYVSKMIPASDKGRFFAFGRVFSGKVSTGLKVRIMGPNYVPGEKKDLYVKSVQRTVIWMGKKQETVEDVPCGNTVAMVGLDQFITKNATLTNEKEVDAHPIRAMKFSVSPVVRVAVQCKVASDLPKLVEGLKRLAKSDPMVVCSMEESGEHIVAGAGELHLEICLKDLQDDFMGGAEIIKSDPVVSFRETVLERSCRTVMSKSPNKHNRLYMEARPLEEGLAEAIDDGRIGPRDDPKIRSKILAEEFGWDKDLAKKIWCFGPETTGPNMVVDMCKGVQYLNEIKDSVVAGFQWASKEGALSEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYLVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVIESFGFSSTLRAATSGQAFPQCVFDHWDMMSSDPLESGSQAAQLVADIRKRKGLKEQMTPLSEFEDKL 1813
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 7348748 7357940 + Cp4.1LG16g07200.1 Cpe16g00723 483098
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe16g00723 1813 CDD EF2_snRNP_III 616 688 - -
Cpe16g00723 1813 CDD eEF2_snRNP_like_C 1697 1775 - -
Cpe16g00723 1813 CDD EF2_snRNP_III 1457 1529 - -
Cpe16g00723 1813 TIGRFAM small_GTP: small GTP-binding protein domain 990 1145 IPR005225 GO:0005525
Cpe16g00723 1813 TIGRFAM small_GTP: small GTP-binding protein domain 149 304 IPR005225 GO:0005525
Cpe16g00723 1813 CDD eEF2_snRNP_like_C 856 934 - -
Cpe16g00723 1813 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 987 1314 IPR000795 GO:0003924|GO:0005525
Cpe16g00723 1813 Pfam Elongation Factor G, domain III 1457 1519 IPR041095 -
Cpe16g00723 1813 Pfam Elongation Factor G, domain III 616 678 IPR041095 -
Cpe16g00723 1813 SUPERFAMILY Ribosomal protein S5 domain 2-like 691 855 IPR020568 -
Cpe16g00723 1813 Gene3D - 699 848 IPR014721 -
Cpe16g00723 1813 Gene3D - 1540 1692 IPR014721 -
Cpe16g00723 1813 SUPERFAMILY EF-G C-terminal domain-like 856 968 IPR035647 -
Cpe16g00723 1813 Gene3D - 1693 1813 - -
Cpe16g00723 1813 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 19 131 IPR000795 GO:0003924|GO:0005525
Cpe16g00723 1813 PANTHER - 130 968 - -
Cpe16g00723 1813 PANTHER TRANSLATION ELONGATION FACTOR-RELATED 4 131 - -
Cpe16g00723 1813 PANTHER TRANSLATION ELONGATION FACTOR-RELATED 130 968 - -
Cpe16g00723 1813 Pfam Elongation factor Tu GTP binding domain 146 471 IPR000795 GO:0003924|GO:0005525
Cpe16g00723 1813 Pfam Elongation factor Tu GTP binding domain 987 1312 IPR000795 GO:0003924|GO:0005525
Cpe16g00723 1813 Pfam Elongation factor Tu GTP binding domain 19 133 IPR000795 GO:0003924|GO:0005525
Cpe16g00723 1813 ProSitePatterns Translational (tr)-type guanine nucleotide-binding (G) domain signature. 187 202 IPR031157 -
Cpe16g00723 1813 CDD EF2 149 359 - -
Cpe16g00723 1813 ProSitePatterns Translational (tr)-type guanine nucleotide-binding (G) domain signature. 1028 1043 IPR031157 -
Cpe16g00723 1813 CDD aeEF2_snRNP_like_IV 688 860 - -
Cpe16g00723 1813 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 133 470 IPR027417 -
Cpe16g00723 1813 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 6 131 IPR027417 -
Cpe16g00723 1813 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 974 1311 IPR027417 -
Cpe16g00723 1813 SMART EFG_IV_2 1576 1692 IPR005517 GO:0005525
Cpe16g00723 1813 SMART EFG_IV_2 735 851 IPR005517 GO:0005525
Cpe16g00723 1813 SUPERFAMILY Ribosomal protein S5 domain 2-like 1532 1696 IPR020568 -
Cpe16g00723 1813 CDD aeEF2_snRNP_like_IV 1529 1701 - -
Cpe16g00723 1813 CDD EF2 990 1200 - -
Cpe16g00723 1813 Gene3D - 973 1207 IPR027417 -
Cpe16g00723 1813 Gene3D - 134 366 IPR027417 -
Cpe16g00723 1813 Gene3D - 5 133 IPR027417 -
Cpe16g00723 1813 Pfam Elongation factor G, domain IV 1581 1692 IPR005517 GO:0005525
Cpe16g00723 1813 Pfam Elongation factor G, domain IV 740 851 IPR005517 GO:0005525
Cpe16g00723 1813 Pfam Elongation factor Tu domain 2 1364 1437 IPR004161 GO:0005525
Cpe16g00723 1813 Pfam Elongation factor Tu domain 2 523 596 IPR004161 GO:0005525
Cpe16g00723 1813 SUPERFAMILY EF-G C-terminal domain-like 1697 1808 IPR035647 -
Cpe16g00723 1813 PRINTS GTP-binding elongation factor signature 282 291 IPR000795 GO:0003924|GO:0005525
Cpe16g00723 1813 PRINTS GTP-binding elongation factor signature 230 240 IPR000795 GO:0003924|GO:0005525
Cpe16g00723 1813 PRINTS GTP-binding elongation factor signature 194 202 IPR000795 GO:0003924|GO:0005525
Cpe16g00723 1813 PRINTS GTP-binding elongation factor signature 246 257 IPR000795 GO:0003924|GO:0005525
Cpe16g00723 1813 PRINTS GTP-binding elongation factor signature 150 163 IPR000795 GO:0003924|GO:0005525
Cpe16g00723 1813 PANTHER TRANSLATION ELONGATION FACTOR-RELATED 971 1812 - -
Cpe16g00723 1813 SMART EFG_C_a 853 942 IPR000640 -
Cpe16g00723 1813 SMART EFG_C_a 1694 1783 IPR000640 -
Cpe16g00723 1813 Gene3D - 849 958 - -
Cpe16g00723 1813 Gene3D Elongation Factor G (Translational Gtpase), domain 3 1456 1533 - -
Cpe16g00723 1813 Gene3D Elongation Factor G (Translational Gtpase), domain 3 615 692 - -
Cpe16g00723 1813 ProSitePatterns Translational (tr)-type guanine nucleotide-binding (G) domain signature. 60 75 IPR031157 -
Cpe16g00723 1813 PANTHER - 971 1812 - -
Cpe16g00723 1813 SUPERFAMILY Translation proteins 1312 1446 IPR009000 -
Cpe16g00723 1813 SUPERFAMILY EF-G C-terminal domain-like 613 689 IPR035647 -
Cpe16g00723 1813 SUPERFAMILY EF-G C-terminal domain-like 1454 1530 IPR035647 -
Cpe16g00723 1813 CDD EF2_II 504 599 - -
Cpe16g00723 1813 Gene3D Translation factors 472 613 - -
Cpe16g00723 1813 Gene3D Translation factors 1313 1454 - -
Cpe16g00723 1813 Pfam Elongation factor G C-terminus 853 940 IPR000640 -
Cpe16g00723 1813 Pfam Elongation factor G C-terminus 1694 1781 IPR000640 -
Cpe16g00723 1813 PANTHER - 4 131 - -
Cpe16g00723 1813 CDD EF2_II 1345 1440 - -
Cpe16g00723 1813 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 146 473 IPR000795 GO:0003924|GO:0005525
Cpe16g00723 1813 SUPERFAMILY Translation proteins 471 605 IPR009000 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe08g01363 Cpe-Chr8:9793719 Cpe16g00723 Cpe-Chr16:7348748 4.52E-15 dispersed
Cpe11g01026 Cpe-Chr11:8638448 Cpe16g00723 Cpe-Chr16:7348748 1.34E-17 dispersed
Cpe16g00723 Cpe-Chr16:7348748 Cpe16g00734 Cpe-Chr16:7426468 7.73E-72 dispersed
Cpe16g00722 Cpe-Chr16:7346603 Cpe16g00723 Cpe-Chr16:7348748 1.68E-62 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe16g00723 K03234 - csv:101209544 1655.96