Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe16g00726 ATGGCAGCTTCATCCATGGCCCTCTCCTCCCCGTCTCTCGCCGGTCAAGCCGTCAAATTGTCCCCCTCCGCCTCCGACATCCTCGGCGAATCCCGCCTCACCATGAGGAAAACCGGTGGTAGACCCAAGCCTGTCTCCTCTGGAAGCCCATGGTACGGTCCAGACCGAGTCAAGTACTTGGGTCCATTCTCCGGTGAGCCGCCGTCCTATCTGACCGGGGAATTTCCCGGCGACTACGGCTGGGACACTGCTGGGCTCTCCGCCGACCCCGAGACGTTCGCCAAAAACAGGGAGCTGGAAGTGATCCACTCGAGATGGGCCATGCTTGGGGCTCTGGGGTGCGTCTTCCCCGAGCTCCTGTCTCGCAACGGAGTCAAATTTGGCGAGGCTGTGTGGTTCAAAGCTGGGTCTCAGATCTTCAGCGAAGGTGGGCTCGACTATTTGGGGAACCCGAGCCTGGTCCACGCTCAGAGCATTTTGGCTATTTGGGCGTGTCAGGTTGTGCTGATGGGTGCGGTTGAGGGCTACAGAATTGCTGGTGGGCCTCTGGGTGAGATCACCGACCCAATTTACCCAGGTGGGAGCTTTGACCCACTGGGGCTGGCCGATGACCCTGAGGCCTTCGCTGAGCTTAAAGTGAAGGAGCTCAAAAATGGGCGATTGGCCATGTTTTCCATGTTCGGTTTCTTCGTGCAGGCCATTGTCACCGGCAAAGGGCCTTTGGAGAACTTGGCCGACCATTTGGCTGACCCTGTTAACAACAATGCCTGGTCTTACGCCACTAACTTTGTCCCTGGAAAGTGA 804 58.08 MAASSMALSSPSLAGQAVKLSPSASDILGESRLTMRKTGGRPKPVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWSYATNFVPGK 267
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 7382116 7382919 + Cp4.1LG16g07160.1 Cpe16g00726 483101
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe16g00726 267 Pfam Chlorophyll A-B binding protein 67 233 IPR022796 -
Cpe16g00726 267 Gene3D Chlorophyll a/b binding protein domain 58 260 - -
Cpe16g00726 267 MobiDBLite consensus disorder prediction 29 48 - -
Cpe16g00726 267 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 1 267 IPR001344 GO:0009765|GO:0016020
Cpe16g00726 267 PANTHER CHLOROPHYLL A-B BINDING PROTEIN 3, CHLOROPLASTIC 1 267 - -
Cpe16g00726 267 SUPERFAMILY Chlorophyll a-b binding protein 50 264 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe04g00672 Cpe-Chr4:6780729 Cpe16g00726 Cpe-Chr16:7382116 4.69E-151 dispersed
Cpe14g00702 Cpe-Chr14:4610792 Cpe16g00726 Cpe-Chr16:7382116 2.40E-119 dispersed
Cpe16g00726 Cpe-Chr16:7382116 Cpe19g01123 Cpe-Chr19:7560916 0 dispersed
Cpe02g00975 Cpe-Chr2:8747885 Cpe16g00726 Cpe-Chr16:7382116 2.12E-67 transposed
Cpe10g00102 Cpe-Chr10:680220 Cpe16g00726 Cpe-Chr16:7382116 0 wgd
Cpe16g00726 Cpe-Chr16:7382116 Cpe20g00512 Cpe-Chr20:2980161 4.47E-37 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe16g00726 K08912 - csv:101213845 534.643