Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe16g00728 ATGTCAAATAATGAAGATCATGAGAAGGATCCTTATTACCCAAATTTTGAAGCTTTTGATCCTTCTAATGTGGGGTTTTACTCTGATTTCTTATATGACTACAACAACTTCCTCTCTACCGACATCGACATATCGTGCTCGTCATCGGAAGCTATTTCTCCAATCAATGATGCTTTGAAGAAGTCGTTGGGTCTCGGAGAGTCGGTGGCGATCGGCGAGCATCCATCAACGCCGAATTCCTCGACTACGTGTTCATCGGTCGAGGCCGCCGCCGGTGGTAGCGATTCAGCCAAGAGTGGGGAGGTGAAATTGGATGGACGAAAAAAGAAGGAGAAAAGAGAAAAAGGGCCAAGATTTGCGTTCTTGACCAAATCTGAAATTGATAACCTTGAAGATGGGTATAGATGGAGAAAATATGGGCAAAAAGCTGTCAAAAACAGCCCTTTTCCAAGAAGTTATTATAAATGCACGAGTCAAAATTGCAGTGTGAAAAAGAGAGTAGAAAGATCATCAGAAGATCCATGTTTTGTTGTAACAACGTACGAAGGGAAACATAACCACTACTGTCCGATTACACTTCGAGGGCACAATGTGGCCGGAGTTTATCCGCCGTCGGCTTCACCGTCGTTGATTCCGGCGAGAATCTTGTCCGGCGAGTTCTATGGAGGGGTGGATGTGCAGCAACAATACTACGAGGTTCCTGGGTATGGGGTGCTGGAAGATCTGGTAAATCCAAAGCAAAACCCATGA 750 45.07 MSNNEDHEKDPYYPNFEAFDPSNVGFYSDFLYDYNNFLSTDIDISCSSSEAISPINDALKKSLGLGESVAIGEHPSTPNSSTTCSSVEAAAGGSDSAKSGEVKLDGRKKKEKREKGPRFAFLTKSEIDNLEDGYRWRKYGQKAVKNSPFPRSYYKCTSQNCSVKKRVERSSEDPCFVVTTYEGKHNHYCPITLRGHNVAGVYPPSASPSLIPARILSGEFYGGVDVQQQYYEVPGYGVLEDLVNPKQNP 249
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 7390912 7392379 - Cp4.1LG16g07300.1 Cpe16g00728 483103
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe16g00728 249 ProSiteProfiles WRKY domain profile. 125 190 IPR003657 GO:0003700|GO:0006355|GO:0043565
Cpe16g00728 249 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 26 195 IPR044810 GO:0003700
Cpe16g00728 249 SUPERFAMILY WRKY DNA-binding domain 123 190 IPR036576 GO:0003700|GO:0006355|GO:0043565
Cpe16g00728 249 MobiDBLite consensus disorder prediction 73 92 - -
Cpe16g00728 249 Gene3D WRKY domain 116 191 IPR036576 GO:0003700|GO:0006355|GO:0043565
Cpe16g00728 249 SMART WRKY_cls 130 189 IPR003657 GO:0003700|GO:0006355|GO:0043565
Cpe16g00728 249 PANTHER WRKY TRANSCRIPTION FACTOR 28-RELATED 26 195 - -
Cpe16g00728 249 MobiDBLite consensus disorder prediction 70 111 - -
Cpe16g00728 249 Pfam WRKY DNA -binding domain 131 187 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe15g00881 Cpe16g00728 CCT
Cpe15g00881 Cpe16g00728 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe16g00728 Cpe-Chr16:7390912 Cpe03g01319 Cpe-Chr3:10730902 2.59E-39 dispersed
Cpe10g00103 Cpe-Chr10:689343 Cpe16g00728 Cpe-Chr16:7390912 9.35E-45 wgd
Cpe15g00881 Cpe-Chr15:8508582 Cpe16g00728 Cpe-Chr16:7390912 3.19E-58 wgd
Cpe16g00728 Cpe-Chr16:7390912 Cpe04g00849 Cpe-Chr4:7845052 1.82E-57 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
50742 PF03106 WRKY 2.60E-25 CL0274 Cpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe16g00728 - - cmos:111448234 486.493