Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe16g00730 ATGGAAAAATTTATGCAACAGAATTCGACCGAAATGGAGTTTTTCTCTGATTATGGCGATGCCAGTAGATACAAAATTCAGGAAGTAATCGGGAAAGGAAGCTATGGGGTTGTGTGTTCTGCTATTGACACACGCACTGGCGACAAGGTTGCAATAAAGAAGATACACAATATTTTTGAGCATATATCTGATGCTGTTAGAATTCTTCGTGAGATTAAGCTGCTTAGACTTCTTCGCCATCCTGATATTGTTGAAATTAAACATGTTATGCTGCCACCTTCACGGAGGGATTTCAAAGATATCTACGTTGTTTTTGAGCTGATGGAATCAGATCTTCACCAAGTTATTAAAGCTAATGATGATCTTACTCGAGAACATTACCAGTTTTTCCTTTACCAACTTCTTCGTGCATTAAAATATATCCATACAGGCGCATCTGACTCAAAGCTTCATTTTGCAGCTAATGTCTACCATCGAGATTTAAAACCAAAGAATATATTAGCAAATTCAAATTGTAAACTTAAAATATGTGATTTTGGATTGGCAAGAGTTGCGTTCAGTGACACGCCAACGACAATTTTCTGGACGGATTATGTTGCTACTAGATGGTACCGGGCGCCCGAGCTCTGTGGTTCATTTTTCTCTAAGTATACACCTGCAATTGATATATGGAGCATTGGCTGCATATTTGCTGAAGTCTTAATGGGGAAGCCACTTTTTCCTGGTAAAAACGTTGTTCACCAGCTTGATTTGATGACAGATCTCCTTGGAACTCCTTCACTAGATACAATCTCCAGGGTACGCAATGACAAGGCTAGAAGATATTTAACTACTATGAGGAAAAAACAGCCAGTGCCATTTGCTCAAAAGTTTCCTAACGCAGATCCTTTAGCACTGAGACTTCTAGAAAGGTTGCTTGCTTTCGATCCAAAAGATAGGCCGACTGCTGAAGAGGCACTGGCTGATCCATACTTCAAGGGATTGGCAAAAATTGAGAGGGAACCTTCCTGCCAGCCAATCTCAAAGATGGAATTTGAATTTGAGAGGCGGAGGGTCGCAAAAGAAGACATTCAAGAGCTAATCTTCCGGGAGATACTAGAATATCACCCTCAGCTACTAAAAGATTACATGAATGGGACTGAGAGGACAAATTTTCTATATCCAAGTGCTGTCGACCAATTTAGAAAGCAGTTTGCACATCTGGAGGAAAATGGTGGTAAAAGTGCGCCGGTTATTCCTCTTGACAGGAAGCATGTATCCCTTCCAAGGTCAACAGTTGTACACTTGAACCCGGTCTACTCTAAGAACCTAATAAATAATGTACCCCTTCAAGATGTGAAGATCTCCGAAGAGTCATACCGAAAGAATTCCCGAGATGGTGAAGGACGGCTAACAAATATATCAAGGACCATGCAGGCACCACAGAAAATCCCGATTGCTAAGCCTGGAAGAGTGGTTGGACCAGTAATAGCAGATGAGAATGGGAGGGTAGTGAAGGAACCATATGATCCAAGAACGTTGATCAGAGGAGCCATTCTTCCTCCTACATATCACTACCAAAAACCCATTGCTGGAAATCAAGAAAGATCTGCAGCAGAAACAAAACTGGATATTTCATTAAGAGCCACTAAGCAAGCATCCCAGTGTGGCATGGCTTCCAAATTAGGATCAGATATAGCCATCAGCATCGACTCGAACCCTTTTTACATGACACGAGCAGGAGTGAACAAGGTCGAACTCAAGGACCAAATATCCATCGACACAAACTTTCTGCAGGCCAAGGCTGCCCAATACAGTGGTCTGGGTGCAGCAACGGCCACCACCACATCGGTCGCTCACAGAAAGGTGATTGCTGGTCAGTATAGCATGACGAAGATGTACTAG 1884 42.3 MEKFMQQNSTEMEFFSDYGDASRYKIQEVIGKGSYGVVCSAIDTRTGDKVAIKKIHNIFEHISDAVRILREIKLLRLLRHPDIVEIKHVMLPPSRRDFKDIYVVFELMESDLHQVIKANDDLTREHYQFFLYQLLRALKYIHTGASDSKLHFAANVYHRDLKPKNILANSNCKLKICDFGLARVAFSDTPTTIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLMGKPLFPGKNVVHQLDLMTDLLGTPSLDTISRVRNDKARRYLTTMRKKQPVPFAQKFPNADPLALRLLERLLAFDPKDRPTAEEALADPYFKGLAKIEREPSCQPISKMEFEFERRRVAKEDIQELIFREILEYHPQLLKDYMNGTERTNFLYPSAVDQFRKQFAHLEENGGKSAPVIPLDRKHVSLPRSTVVHLNPVYSKNLINNVPLQDVKISEESYRKNSRDGEGRLTNISRTMQAPQKIPIAKPGRVVGPVIADENGRVVKEPYDPRTLIRGAILPPTYHYQKPIAGNQERSAAETKLDISLRATKQASQCGMASKLGSDIAISIDSNPFYMTRAGVNKVELKDQISIDTNFLQAKAAQYSGLGAATATTTSVAHRKVIAGQYSMTKMY 627
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 7402300 7406637 + Cp4.1LG16g07220.1 Cpe16g00730 483105
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe16g00730 627 Gene3D Phosphorylase Kinase; domain 1 39 371 - -
Cpe16g00730 627 ProSitePatterns Protein kinases ATP-binding region signature. 30 54 IPR017441 GO:0005524
Cpe16g00730 627 SMART serkin_6 24 325 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe16g00730 627 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 9 503 - -
Cpe16g00730 627 SUPERFAMILY Protein kinase-like (PK-like) 20 329 IPR011009 -
Cpe16g00730 627 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 9 503 - -
Cpe16g00730 627 Gene3D Transferase(Phosphotransferase) domain 1 110 348 - -
Cpe16g00730 627 CDD STKc_TDY_MAPK 23 370 - -
Cpe16g00730 627 ProSiteProfiles Protein kinase domain profile. 24 325 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe16g00730 627 Pfam Protein kinase domain 24 325 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe12g00231 Cpe-Chr12:1545585 Cpe16g00730 Cpe-Chr16:7402300 0 dispersed
Cpe14g00375 Cpe-Chr14:2297757 Cpe16g00730 Cpe-Chr16:7402300 0 dispersed
Cpe16g00730 Cpe-Chr16:7402300 Cpe17g00119 Cpe-Chr17:737050 0 dispersed
Cpe15g00873 Cpe-Chr15:8465383 Cpe16g00730 Cpe-Chr16:7402300 0 wgd
Cpe16g00730 Cpe-Chr16:7402300 Cpe04g00845 Cpe-Chr4:7825050 0 wgd
Cpe16g00730 Cpe-Chr16:7402300 Cpe05g01548 Cpe-Chr5:10632667 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
62910 PF00069 Pkinase 1.00E-62 CL0016 Cpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe16g00730 - - csv:101216657 1136.71