Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe16g00735 ATGGATGGTAGTGTACGAGCTCGTTTCCCACTCGGAAAACAGTCATCGCTCAAGCCGGAACGTGAAGATTCGGCTGTGGTTACCGATGAGCTTGATGATTCGATCGTGATTGACCCTGGGATTAAGCTCATGTACCTGGCGAATGATGGCGATTCGGATGGGATTAGGGAGCTACTGGATTCGGGTACCGACGTGAATTTTCACGACACTGATGGCCGAACCTCTTTGCATGTTGCTAGTTGTCAGGGCAGGCTGGACGTCGTTGAGTTGCTCCTCGAACGTGGTGCAGATGTCGACGTTCAGGACCGATGGGGCAGCACGCCTCTTGCAGATGCCATATATTACAAGAATCATGATGTGATCAAACTCTTAGAAAAACATGGTGCAAAGCTACCGATGGCTCCAATGGTAGTGCAAAATGCTCTTGAAGTTCCGGAATATGAGATCGATCCAAATGAACTTGATTTTTCTAAGAGTGTGAACATTACAAAAGGAACTTTCTGCAGTGCTTCTTGGCGTGGAATTGAAGTTGCCGTGAAGACACTAGGCAAGGATGTTTTCTCCGACGAGGATAAAGTGAAGGCATTTAGGGATGAACTTGCTTTACTACAGAAGATACGGCATCCTAATGTTGTGCAATTCCTGGGAGCTGTAACACAAAGTAGTCCAATGATGATTGTCACAGAGTATTTGCCCCAGGGGGACCTTCATGCATTCTTGGAGTGTAAAGGTTCCTTGAAGCTACCAACAGTTGTAAAGTTTGCTCTTGACATTGCAAGGGGAATGAATTATTTGCATGAGCATAAACCTGAAGCAATAATCCATCGTGATCTTGAACCTTCAAACATACTGCGGGATGATTCTGGACACCTGAAAGTTGCAGACTTTGGAGTTAGCAAACTTCTAAAATTTTCTAATAGAGTTAAAGAAGACAGACCTGTGGCTGTGACATGTCAGGAGACTTCATGGAAATATGCTGCACCTGAGGTTTATAAAAATGAAGAATATGATACGAAAGTGGATGTGTTTTCATTTGCTTTGATATTGCAAGAGATGATAGAAGGCAATCCACCTTTTTCAACAAAGCCAGAAAATGAAGTACCCAAAGCTTATGTAGCTAATGAACGGCCACCATTTACGGCTCCACCTAAGCGTTATCGGCATGGAATACAGGAACTAATCCGGGAATGTTGGGATGAGAAGCCACATAAAAGACCCACATTTCGGCAAATAATCGAAAGGTTGGAGGATATTAACACTCAACTTATGCAAACAAGAAGCTTGAAGGTGAATCCATTCTGCAATTGTTTCCGGAACCTGAAAGCCTTATTTACAAGTGAAAGGACTAATCCAGGCAGCAGATCTTCTTACTCGGAAGCCAAATGA 1386 43.72 MDGSVRARFPLGKQSSLKPEREDSAVVTDELDDSIVIDPGIKLMYLANDGDSDGIRELLDSGTDVNFHDTDGRTSLHVASCQGRLDVVELLLERGADVDVQDRWGSTPLADAIYYKNHDVIKLLEKHGAKLPMAPMVVQNALEVPEYEIDPNELDFSKSVNITKGTFCSASWRGIEVAVKTLGKDVFSDEDKVKAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPQGDLHAFLECKGSLKLPTVVKFALDIARGMNYLHEHKPEAIIHRDLEPSNILRDDSGHLKVADFGVSKLLKFSNRVKEDRPVAVTCQETSWKYAAPEVYKNEEYDTKVDVFSFALILQEMIEGNPPFSTKPENEVPKAYVANERPPFTAPPKRYRHGIQELIRECWDEKPHKRPTFRQIIERLEDINTQLMQTRSLKVNPFCNCFRNLKALFTSERTNPGSRSSYSEAK 461
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 7431807 7439408 - Cp4.1LG16g07410.1 Cpe16g00735 483110
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe16g00735 461 ProSiteProfiles Ankyrin repeat region circular profile. 71 103 - -
Cpe16g00735 461 Pfam Protein tyrosine and serine/threonine kinase 163 415 IPR001245 GO:0004672|GO:0006468
Cpe16g00735 461 CDD STKc_MAP3K-like 162 415 - -
Cpe16g00735 461 Gene3D Transferase(Phosphotransferase) domain 1 232 442 - -
Cpe16g00735 461 Gene3D - 35 140 IPR036770 -
Cpe16g00735 461 SUPERFAMILY Ankyrin repeat 42 134 IPR036770 -
Cpe16g00735 461 ProSiteProfiles Ankyrin repeat profile. 71 103 IPR002110 GO:0005515
Cpe16g00735 461 PIRSF ILK 2 438 - -
Cpe16g00735 461 PANTHER INTEGRIN-LINKED KINASE FAMILY PROTEIN 9 441 - -
Cpe16g00735 461 SMART ANK_2a 104 133 IPR002110 GO:0005515
Cpe16g00735 461 SMART ANK_2a 71 100 IPR002110 GO:0005515
Cpe16g00735 461 SMART ANK_2a 39 67 IPR002110 GO:0005515
Cpe16g00735 461 ProSiteProfiles Protein kinase domain profile. 156 422 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe16g00735 461 Pfam Ankyrin repeats (3 copies) 43 131 IPR002110 GO:0005515
Cpe16g00735 461 MobiDBLite consensus disorder prediction 1 24 - -
Cpe16g00735 461 SUPERFAMILY Protein kinase-like (PK-like) 172 445 IPR011009 -
Cpe16g00735 461 Gene3D Phosphorylase Kinase; domain 1 148 231 - -
Cpe16g00735 461 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 9 441 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe01g01485 Cpe-Chr1:8860395 Cpe16g00735 Cpe-Chr16:7431807 4.10E-100 dispersed
Cpe04g00994 Cpe-Chr4:8935759 Cpe16g00735 Cpe-Chr16:7431807 3.61E-09 dispersed
Cpe09g00785 Cpe-Chr9:7275391 Cpe16g00735 Cpe-Chr16:7431807 4.37E-168 dispersed
Cpe15g00260 Cpe-Chr15:2500904 Cpe16g00735 Cpe-Chr16:7431807 4.94E-108 dispersed
Cpe16g00735 Cpe-Chr16:7431807 Cpe04g00611 Cpe-Chr4:6366608 7.36E-50 dispersed
Cpe10g00123 Cpe-Chr10:793322 Cpe16g00735 Cpe-Chr16:7431807 0 wgd
Cpe16g00735 Cpe-Chr16:7431807 Cpe05g01543 Cpe-Chr5:10606822 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
62911 PF07714 PK_Tyr_Ser-Thr 1.40E-56 CL0016 Cpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe16g00735 - - cpep:111777411 932.554