Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe16g00740 ATGGATCAGCAACACAGCATCTATAATATACCCGTCATATGGAGGGGAACAAAGTATATGGTGGAAATCAGTTCAGAGTCTACTCTTAGGGACCTCGGTCAGAAGCTGCTAAACTTAACTGGAGTTAAAGCAGATACCATTAGACTCATAGTTCCACAATATTCCGGCAAAAGCTCTAAAATGTTTCATCCTTTTTCTGATGAAGATGGATACTTGAATTTGCAGAAAATTTCCATTTTCAAGGACAACAAGCCTATCAGAATGATGGGAGTCCCTAGGAATGAGGTAGATGAAGTTTTGAACAATGCTAAGAAAAATGAACGAATTGCTGGGTTTGATGAAGAAGAGAAAAGACAGAAGCAACGAATGTCAAGTAAGCCTATGGGCGTGCTGAAACTGCCAGAAGGACCCTATGTATTTTGTGAATTTCGGACCCTTCAAATTCCAGGAATTGAGTTGAACCCTCCAGCTTCAGAAGCTTTGAAAAGAATGCATATGTTAGCTGCGGATCCTGGTATTGTTGCAATCATGAACAAGCACCGTTGGCGTGTGGGAATTATGACTGAGATGGATCCTGTTGGCTATGTTGGTGTGAGCCCAAAATGTATTCTTGGCTTTAATAAGAACCATGGAGAGGAGATATCCCTGCGACTTCGTACAGATGATCTAAAGGGCTTCAGAAAATATGAAAGAGTTAAAAAAACTTTACTCCACGAACTTGCACATATGATTTATTCTGAGCACGATGCCAACTTCTATGCTTTGGATAAACAGCTTAATGAGGAGGCTGCCACTTTGGATTGGACAAGATCAAAAGGCCATACGTTGGCTGGAATTAAGTATTCTCAGTATCATGAAGAAAGCGACGATGTCGAAGATGGCTTTGGTGTCTCACAGAAACTTGGTGGAAGTACGTCGCATCAGCTGGTTAATGCCCGTTCTGCTTCAGTTGCTGCTGCTTATCACCGTTTGACCAACACAGCAGATTTCAGTTCAAGAGTGTCTCCAGTAAGTGGAGAGTCGGATCCCAATAGTTCTAATTACCAAAAAAAACTGGAGCCTGATCCTAACGACGGTGCTTATCAAAAGAAGCTTGAGCCTGACCCTGATGACAGCTCCAATGAACAAAACATGCTCAAGCCTGATCCCGACAACAATTCTAATTATGAAAACAAGCCCGAACCTGATCCTGATGATGCTATAGGTTGCAAAATTATAGAATCTGATGGTGGACCAAGATTCAATAGGAGTCTAGTAGTTCAAACCGATTTGAGCAGCAAGGATGTGCAGCCTGTGCCTTCTACTAACAGCAGATTGTTGGAAGCCACAAAGTTGTATGGAGAACCGGATCCTGATGATATGGGAAGCTCTTTGAACGGTAAAATAACTGACAAAAACCATTTTTCTCCAGGAATGCAAAACCTGGATTGCAACAGTTCACAAAGAATGGTTGTTGAACCTGGTCCAGATGACTTGGGAGAGAAAATGAACACGTTGGGGTGTGGAAATGCTACTGGACATGATGAAGCCGATTGCCTACAAGCTGGCTTAGTGGCAGATCAAACCCATTTAAGTATAAGCTGTAAAAAGCATGATGAGGAACCGATGCAGATAGAGCCTGATCCTGACGAAAGTTTGGTACATCAAGCGGATTTATCTAAAATGCCTGTTGACGAGCCTGATCCCGATGACCAAGAAATTCAAAGAATACAAGACTCTGTTTCTGTTGTATGCAATCGATTGCGTGAAGCTATTGGAAAGCTGCTGACTGAACTTAAACCTTCTGAATCTTCAGCAGTTTTTCAAACTCTGTTCAAGATTGTTAAGAACGTAATTGAACACCCTGATGAAACGAAATACAGAAAGCTTCGCAAGGCAAGAGGACTAACTTTCCCCTTCTACTTCACTTCATTTCGTGAACTACTCTCCCTCTCTACTAATCCCATCATCCAGAAGAATGTTGCCAATTATAAAGCTGCATTGGAGATCCTCTTCTTGATAGGTTTTATTGAAGATGCACTGCTAGATGAAATCGGCAAGGTAGAAACATTCCTTGTACTGAAGCGCAACGATCCTGGCTTATTGTGGCTTGCGAAATCCACCCTTGAAACATTCAATGGTTGCATGTAG 2130 41.97 MDQQHSIYNIPVIWRGTKYMVEISSESTLRDLGQKLLNLTGVKADTIRLIVPQYSGKSSKMFHPFSDEDGYLNLQKISIFKDNKPIRMMGVPRNEVDEVLNNAKKNERIAGFDEEEKRQKQRMSSKPMGVLKLPEGPYVFCEFRTLQIPGIELNPPASEALKRMHMLAADPGIVAIMNKHRWRVGIMTEMDPVGYVGVSPKCILGFNKNHGEEISLRLRTDDLKGFRKYERVKKTLLHELAHMIYSEHDANFYALDKQLNEEAATLDWTRSKGHTLAGIKYSQYHEESDDVEDGFGVSQKLGGSTSHQLVNARSASVAAAYHRLTNTADFSSRVSPVSGESDPNSSNYQKKLEPDPNDGAYQKKLEPDPDDSSNEQNMLKPDPDNNSNYENKPEPDPDDAIGCKIIESDGGPRFNRSLVVQTDLSSKDVQPVPSTNSRLLEATKLYGEPDPDDMGSSLNGKITDKNHFSPGMQNLDCNSSQRMVVEPGPDDLGEKMNTLGCGNATGHDEADCLQAGLVADQTHLSISCKKHDEEPMQIEPDPDESLVHQADLSKMPVDEPDPDDQEIQRIQDSVSVVCNRLREAIGKLLTELKPSESSAVFQTLFKIVKNVIEHPDETKYRKLRKARGLTFPFYFTSFRELLSLSTNPIIQKNVANYKAALEILFLIGFIEDALLDEIGKVETFLVLKRNDPGLLWLAKSTLETFNGCM 709
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 7473144 7477669 - Cp4.1LG16g07420.1 Cpe16g00740 483115
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe16g00740 709 PANTHER ZINC METALLOPROTEINASE-LIKE PROTEIN 2 626 - -
Cpe16g00740 709 PANTHER ZINC METALLOPROTEINASE-LIKE PROTEIN 645 704 - -
Cpe16g00740 709 SUPERFAMILY Ubiquitin-like 2 59 IPR029071 -
Cpe16g00740 709 Pfam WLM domain 150 324 IPR013536 -
Cpe16g00740 709 CDD PUB_WLM 584 704 - -
Cpe16g00740 709 MobiDBLite consensus disorder prediction 331 414 - -
Cpe16g00740 709 Pfam PUB domain 599 625 IPR018997 -
Cpe16g00740 709 MobiDBLite consensus disorder prediction 331 352 - -
Cpe16g00740 709 Gene3D - 2 95 - -
Cpe16g00740 709 ProSiteProfiles WLM domain profile. 131 325 IPR013536 -
Cpe16g00740 709 SUPERFAMILY PUG domain-like 576 703 IPR036339 -
Cpe16g00740 709 Gene3D - 583 699 - -
Cpe16g00740 709 MobiDBLite consensus disorder prediction 387 403 - -
Cpe16g00740 709 MobiDBLite consensus disorder prediction 356 377 - -
Cpe16g00740 709 SMART PGNneu 599 686 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe15g00873 Cpe16g00740 CCT
Cpe05g01548 Cpe16g00740 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe10g01161 Cpe-Chr10:8529050 Cpe16g00740 Cpe-Chr16:7473144 3.24E-12 dispersed
Cpe16g00740 Cpe-Chr16:7473144 Cpe06g00807 Cpe-Chr6:5163262 1.68E-11 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe16g00740 - - cmax:111483826 1301.19