Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe16g00749 ATGAAATTCGAAGAGCAGAACCTGAAGCATCAGTCTGAACAGAGGTGCAGGAATATTGAGTTCGATACAATCGATCACCATCGCAGTATTTCGTCGCTGGTTGAATGCGAAGACTGCGAGAGGGATGGTGACGGCCTCTATATCCCTCCTCTCAACTTTTCCATGGTTGATAATGGCATTTTCCGCTCCGGCTTCCCTGACTCTGCTAACTTCTCCTTCCTCCAAACCCTAGGTCTCCGTTCCATTATTATCTATGTTTTGACTTTGTGTGATGAACGGATTAATGATCTTGCATCGACTCATGGATGCAGATGTTTATGTCCGGAGCCGTATCCGGAACACAACATGGAGTTCCTCAAGTCGAACGGGATTAGATTGTATCAATTTGGAATTGAAAGCTATAAGGAGCCATTCGTGAACATTCCGGATGATATGATTCGTGAAGCACTAAAAGTTGTCCTTGACGATAGGAATCACCCAGTTCTCATACATTGCAAAAGAGGAAAGCATCGAACAGGTTGTCTTGTGGGATGCCTTAGAAAATTGCAGAGGTGGTGCCTCACTTCTGTGTTTGATGAGTACCAGAGATTTGCAGCTGCAAAAGCAAGAATTTCAGACCAGAGGTTTATGGAGCTGTTTGATATCTCTGACTTTAAGCATCATCCCATGTTATTCTCATGCTCAAAGTGGTGA 693 44.01 MKFEEQNLKHQSEQRCRNIEFDTIDHHRSISSLVECEDCERDGDGLYIPPLNFSMVDNGIFRSGFPDSANFSFLQTLGLRSIIIYVLTLCDERINDLASTHGCRCLCPEPYPEHNMEFLKSNGIRLYQFGIESYKEPFVNIPDDMIREALKVVLDDRNHPVLIHCKRGKHRTGCLVGCLRKLQRWCLTSVFDEYQRFAAAKARISDQRFMELFDISDFKHHPMLFSCSKW 230
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 7535164 7539114 + Cp4.1LG16g07490.1 Cpe16g00749 483124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe16g00749 230 CDD PFA-DSP_Siw14 46 214 - -
Cpe16g00749 230 ProSiteProfiles Dual specificity protein phosphatase domain profile. 52 224 IPR020422 GO:0006470|GO:0008138
Cpe16g00749 230 PANTHER TYROSINE-PROTEIN PHOSPHATASE DSP1 103 228 - -
Cpe16g00749 230 Gene3D Protein tyrosine phosphatase superfamily 47 217 IPR029021 -
Cpe16g00749 230 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 136 176 IPR000387 GO:0016311|GO:0016791
Cpe16g00749 230 PANTHER TYROSINE-PROTEIN PHOSPHATASE 13 85 - -
Cpe16g00749 230 ProSitePatterns Tyrosine specific protein phosphatases active site. 163 173 IPR016130 GO:0016311|GO:0016791
Cpe16g00749 230 Pfam Tyrosine phosphatase family 105 221 IPR004861 -
Cpe16g00749 230 Pfam Tyrosine phosphatase family 47 84 IPR004861 -
Cpe16g00749 230 PANTHER TYROSINE-PROTEIN PHOSPHATASE DSP1 13 85 - -
Cpe16g00749 230 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 48 215 IPR029021 -
Cpe16g00749 230 PRINTS Plant and fungal dual specificity phosphatase signature 141 155 IPR020428 GO:0016791
Cpe16g00749 230 PRINTS Plant and fungal dual specificity phosphatase signature 47 64 IPR020428 GO:0016791
Cpe16g00749 230 PANTHER TYROSINE-PROTEIN PHOSPHATASE 103 228 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe16g00749 Cpe-Chr16:7535164 Cpe18g00256 Cpe-Chr18:4212289 7.92E-70 dispersed
Cpe15g00854 Cpe-Chr15:8351458 Cpe16g00749 Cpe-Chr16:7535164 1.92E-43 wgd
Cpe16g00749 Cpe-Chr16:7535164 Cpe04g00827 Cpe-Chr4:7718030 6.30E-100 wgd
Cpe16g00749 Cpe-Chr16:7535164 Cpe05g01529 Cpe-Chr5:10530069 3.40E-134 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe16g00749 K18045 - csv:101222170 355.91