Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe16g00766 ATGGGCATGGAGGATCAGCGAGACGATGTTGCACCATCAGAGCAAGGGACTTCCAATGCTTCCTGGTGGTCTTCTGATTTTGTGGAGAAATTTGGATCTGTTTCTTTGGGTCCTCGGGAAGACATTGTGAGTGAAAGGGAAGAGATCATCAATTCTGACCAAGATGTGTTGTTGTCGCCTCAGAGAGCATCTCAAATTCTCTGGCGTACTGGAATGCTTTGTGAACCAATTCCAGATGGTTTCTATTATGTTATTCCGGATAAGAGGCTAAAAGAGCGGTTCCACAGTATTCCTTCGTTGGATGAGCTTCGTGCTTTGGAGGCCGAAGGTTACAGAAACGATGTTATTCTTGTGGAGCCAGAGAAAGATAAAAAGCTTTCTATGCTGAAGCAACTGATCTCGACACTGATTAAAGGCGTGAGTTCAAATCCAGCTGCAATTATCAAGAAGATTGCTGGACTGGTTTCTGATTTTTATAAACGACCAATTTTAGAAAGTCCAGCAAAAGCTGCTGTAGAAGAAGCCAACCACTTGTTTGAGGATAGAGGCATTCAGTTGCTCGGTCAAATAAAATTTGGTTCTTGCCGTCCTAGAGCTATCTTATTTAAGGTTCTGGCGGACACTGTAGGGCTTGAAAGTCGTCTCATGATGGGCTTGCCAAATGAGGGGGCTAATGGGTGCGTGGACTCATACAAGCACATGTCGGTGACAGTTGTGTTGAATTCTGTGGAACTAGTTGTTGATCTGATGCGATTTCCTGGCCAGTTGTTACCTCAGTCAACTAAGGCAATTTTTATGACACATATTTCCGCTGCTGGGGAAAGCGATTCTGCAGAAAACGACTCATGTGATTCACCGCTAGAACCTAACAGTCCTCTTTATGGTTTCTCAGAAAGAGTTGATCTTGACAGTGGTGAAAAAGATGAGGGCCTTCAATTCCACAGAAAAATTGAAGCAGCTTCAAATGCATATGCTCCTTCATTGCGCAATATGATGTTGCGATCAAGTACAACACTCGACAGGAAAATGAGTTTATCACATAGTGAACCTAACATTGCAAATGCATTTTGGCGAAGTTGTCGGAGAAAAGATATTGCTGAACAGCGGACTGCTAGTTCAAGCAGTCCAGAGCATCCTTCATTTCGGGCGCGAGGCCGGTCCATGCTTAGTGGGGATAGGAAAGCCTTCAGAGATTTTTCTGATGATGTCTCTACTTCAAGCTACAGATCAGATGGTGCTTCAACTTCAACTTCCACTTCCACTTCGGCTTCAAATTCAGAAGCACGTCGATTAAGAAGAAGGAGCATCAGCATTACTCCAGAGATTGGTGATGATATCGTGAGGGCTGTACGAGCAATGAATGAAACACTGAAGCAAAATCGTCTTTTGAGAGAACAAGTAGATGACAGGTCGTTCTCCCACCCTTCAAATGAAAGAAATAATAGTTCAGATGTTCGGAGAAATGATCAAGTGGGTTCTCAAAGAGCAATATCATTACCGTCATCGCCACATGATTATAGGGGTCAAACCTCTGATAGAAGTGGGCATTCAGCATGGACTAAAGTTCTTGAATCATTCTCCTTGAACGACAAACCCCTATTACCTTTCCCCGAGTGGAATATCGATTACTCAGAACTGACAGTTGGAATCCGTATTGGAATCGAGACCTTTGGTGTCAATATCAATCCAGGGTTTTTTGGGGAAGTTTTTCGTGGCATTTGGAATGGAACGGATGTGGCAATCAAAGTTTTCCTAGAGCAAGATCTAACTCCTGAAAACATTGAGGACTTCTGTAATGAGATATTAATTCTTAGTCGTCTTCGACATCCTAATGTTATATTATTTCTGGGCGCATGTACAGAACCGCCACGCTTGTCGATGATCACAGAATATATGGAGCTGGGTTCCTTGTATTCCTTGATCCATTTGAGTGGTCAGAAAAAAAAACTTAGCTGGCGGAGGAGACTGAAGATGTTGCGTGACATATGCAGGGGTTTGATGTGCATACACCGAATGAAAATAGCTCACCGGGACCTGAAAAGTGCAAATTGCCTAGTCAACAAGCATTGGACCGTCAAGATATGTGATTTTGGACTTTCAAGAATATTGACAGATGCTCCAGCAAGAGGGTCTCCATCTGCAGGAACTCCAGAATGGATGGCTCCTGAGCTCTTTCGAAACGAACCCTTCACTGAAAAGTGTGATATTTTCAGCCTGGGGGTCATCATGTGGGAGCTTTGCACCCTAAGTAGACCATGGGAGGGTGTTCCACCGGAGCGGGTAGTTTATGCTGTTGGCACTGAGGGATCCCGCCTAGAGATTCCTGAAGGCCCGCTTGGCAGGCTTATATCAGATTGTTGGGCAGAACCGAATGAGCGGCCAAGCTGCGAAGAGATTGTCACCCGCTTGCTCGATTGCGAGTACTCACTTTCTTGA 2436 44.46 MGMEDQRDDVAPSEQGTSNASWWSSDFVEKFGSVSLGPREDIVSEREEIINSDQDVLLSPQRASQILWRTGMLCEPIPDGFYYVIPDKRLKERFHSIPSLDELRALEAEGYRNDVILVEPEKDKKLSMLKQLISTLIKGVSSNPAAIIKKIAGLVSDFYKRPILESPAKAAVEEANHLFEDRGIQLLGQIKFGSCRPRAILFKVLADTVGLESRLMMGLPNEGANGCVDSYKHMSVTVVLNSVELVVDLMRFPGQLLPQSTKAIFMTHISAAGESDSAENDSCDSPLEPNSPLYGFSERVDLDSGEKDEGLQFHRKIEAASNAYAPSLRNMMLRSSTTLDRKMSLSHSEPNIANAFWRSCRRKDIAEQRTASSSSPEHPSFRARGRSMLSGDRKAFRDFSDDVSTSSYRSDGASTSTSTSTSASNSEARRLRRRSISITPEIGDDIVRAVRAMNETLKQNRLLREQVDDRSFSHPSNERNNSSDVRRNDQVGSQRAISLPSSPHDYRGQTSDRSGHSAWTKVLESFSLNDKPLLPFPEWNIDYSELTVGIRIGIETFGVNINPGFFGEVFRGIWNGTDVAIKVFLEQDLTPENIEDFCNEILILSRLRHPNVILFLGACTEPPRLSMITEYMELGSLYSLIHLSGQKKKLSWRRRLKMLRDICRGLMCIHRMKIAHRDLKSANCLVNKHWTVKICDFGLSRILTDAPARGSPSAGTPEWMAPELFRNEPFTEKCDIFSLGVIMWELCTLSRPWEGVPPERVVYAVGTEGSRLEIPEGPLGRLISDCWAEPNERPSCEEIVTRLLDCEYSLS 811
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 7615432 7623312 - Cp4.1LG16g07770.1 Cpe16g00766 483141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe16g00766 811 Gene3D Phosphorylase Kinase; domain 1 541 633 - -
Cpe16g00766 811 MobiDBLite consensus disorder prediction 461 485 - -
Cpe16g00766 811 MobiDBLite consensus disorder prediction 486 514 - -
Cpe16g00766 811 Pfam Ethylene-responsive protein kinase Le-CTR1 61 256 - -
Cpe16g00766 811 SUPERFAMILY Protein kinase-like (PK-like) 556 802 IPR011009 -
Cpe16g00766 811 MobiDBLite consensus disorder prediction 401 436 - -
Cpe16g00766 811 MobiDBLite consensus disorder prediction 401 426 - -
Cpe16g00766 811 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 31 809 - -
Cpe16g00766 811 MobiDBLite consensus disorder prediction 461 514 - -
Cpe16g00766 811 MobiDBLite consensus disorder prediction 1 21 - -
Cpe16g00766 811 SMART serkin_6 555 804 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe16g00766 811 ProSiteProfiles Protein kinase domain profile. 555 810 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe16g00766 811 Pfam Protein tyrosine and serine/threonine kinase 559 803 IPR001245 GO:0004672|GO:0006468
Cpe16g00766 811 Gene3D Transferase(Phosphotransferase) domain 1 634 810 - -
Cpe16g00766 811 CDD STKc_MAP3K-like 561 803 - -
Cpe16g00766 811 MobiDBLite consensus disorder prediction 367 389 - -
Cpe16g00766 811 ProSitePatterns Serine/Threonine protein kinases active-site signature. 674 686 IPR008271 GO:0004672|GO:0006468
Cpe16g00766 811 PANTHER MITOGEN ACTIVATED PROTEIN KINASE KINASE KINASE-LIKE PROTEIN-RELATED 31 809 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe05g01514 Cpe16g00766 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe16g00766 Cpe-Chr16:7615432 Cpe04g00031 Cpe-Chr4:317721 2.88E-08 dispersed
Cpe16g00766 Cpe-Chr16:7615432 Cpe05g01514 Cpe-Chr5:10427365 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
62912 PF07714 PK_Tyr_Ser-Thr 1.20E-57 CL0016 Cpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe16g00766 - - cmo:103490492 1445.25