Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cpe16g00767 | ATGAAGCTGAAGAATCTGATGGAAAACAAGCAATTGGATTTCAATCAGCCGTTTCTTTCTGTGAGGCGGGTTTCGTCGATGGAAACGTCGTCGAAAGCTAACGGAACAGTGATAACGGAGAATCGCTGGCCGCCTCTTCCTGTCTACAAGTCGGAATTGAAATCGGGTCCAGTGAGTAATCCGGGGAACGTTCCTTTTCTATGGGAACATGCCCCAGGAAGGCCCAAAGATGGAAGAAAATCACTAACCATAGGTTCTAAATCGCCATTGGCTGCTCCGAAACACCCTTCTGGGATGTCGTCGGGTTCAGAACAACAGCATTGTAACAGCAAAGAGTCAACAAGTGGAGGAGAAGCACTTCCAAATTCTGACCATTCCCCTGCTTATAAGAACATCGTTAAGTTTAAGACCTTGAGGGAGAGGATCGAGAGAGATTTAAGTTCTGATTCGGAGGACGGAGATGAGACTTATCTCGATGCAAATGGCACCATTTCTAGATCCGAGTCATTTTCCATGAACTGCAGTGTAACTGGTTTGAGTGGACTGGATGGTGGTGATGTTAAACCATCGGGATCGTTCTCGAAAGATCAGCGAACTCACGACATAATGATGGGACGATTCCTGCCTGCTGCCAAGGCAATGGCTTCAGAAACACCTCAAGTTGCTCATAGAAAGCAAAGTGTTCAAAGAGAGCAGAGAAAAGAGGCAAAGAAGTTGATTAGAATGGGTAAGGAACATCGAGTAAATTCACTTCCACCGGTGTTGCGATCATATTATGCGCCTCCGAATCCACACGACGTTGAAGAAATAAGCGAAGACGATGATATTAGCCTCGATGAATCTGAGTACTCATCTACTAAATCTTGTGGTTTGTTCGCTCGATTTTGCCTTCTACACCCAGTTCCCGGAATGAGAACGCAAGGCGCCTCTGTTGCTTCAGCTCCTAGCGTTCAGAATGATAATTCGACTCATGGTTCTTGCAGCAGCATTAAGAATCTTAGAAACGAGGAAAAACCGCTCGATTCGAACCAGATGGGTGAGAGCACGCCAAACGACTCGAGAAGGCGATACAAATCTCGCCTTTCTGAAGAAAAAGTTTTCCCCAGTGACCCAGAAGGAGTTAAGAGTTCCATACATAGAAGAACAGGAACCAAATTTCGTGAATTGTTAGCCAATGAATCATCTTCGGCGAGGCCCTTTGTCGTCGAGAAAACGTCGCTCGTAGATTCCGTTCACAATATGAAGTCTCGGAGTTCAAATTTAAGCTCTAAAGAGAATCTTCATTTGGATTCTTCCCCTCAACATGTCCAGCCATTAAATGTTGAAGGTGAAAACAAGAGGTTGAGCTCTACGAGTATCGACTCGATGGATTCGTGTTCATCTTATTACGATACGAAAGCGAACTTGAAGGCGACACGTTTGGACGTAGATCTAATCCATGATGCAAAAGTGACACATGAAAGAACAATTGATTCTGAATGTGATCATCATAAAAAATCAAGTCACGGAGAAAGCTCAGATGACTCTTTTCAGGATTTTGTCTCATTTACGAGTTCAGAAGCTTCGAAGCTACGTTTAGAAGGCCACGACCAGGATTCAATCACATCGACAAGCTCAAGAGCCACAGCGCGAGGCAAAATCGATCTCGAAAGCACTCGTCGATCAAAAAGATCCTTGTCCATTTCTTCACAGCTTGCACTAGCTCCACCTCTACCAAAATCTCCATCCGAGTCCTGGCTTAAGCGCACGTTGCCAACCATTTCGTCGAGAAACTCGATGCCGAAGTCTAGGCTGGCTGCTCGCGTTTACTCTACAAGGCAAAACAACACTGTATTCTGA | 1839 | 45.13 | MKLKNLMENKQLDFNQPFLSVRRVSSMETSSKANGTVITENRWPPLPVYKSELKSGPVSNPGNVPFLWEHAPGRPKDGRKSLTIGSKSPLAAPKHPSGMSSGSEQQHCNSKESTSGGEALPNSDHSPAYKNIVKFKTLRERIERDLSSDSEDGDETYLDANGTISRSESFSMNCSVTGLSGLDGGDVKPSGSFSKDQRTHDIMMGRFLPAAKAMASETPQVAHRKQSVQREQRKEAKKLIRMGKEHRVNSLPPVLRSYYAPPNPHDVEEISEDDDISLDESEYSSTKSCGLFARFCLLHPVPGMRTQGASVASAPSVQNDNSTHGSCSSIKNLRNEEKPLDSNQMGESTPNDSRRRYKSRLSEEKVFPSDPEGVKSSIHRRTGTKFRELLANESSSARPFVVEKTSLVDSVHNMKSRSSNLSSKENLHLDSSPQHVQPLNVEGENKRLSSTSIDSMDSCSSYYDTKANLKATRLDVDLIHDAKVTHERTIDSECDHHKKSSHGESSDDSFQDFVSFTSSEASKLRLEGHDQDSITSTSSRATARGKIDLESTRRSKRSLSISSQLALAPPLPKSPSESWLKRTLPTISSRNSMPKSRLAARVYSTRQNNTVF | 612 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 16 | 7627807 | 7632048 | + | Cp4.1LG16g07700.1 | Cpe16g00767 | 483142 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cpe16g00767 | 612 | MobiDBLite | consensus disorder prediction | 179 | 199 | - | - | |
| Cpe16g00767 | 612 | MobiDBLite | consensus disorder prediction | 531 | 545 | - | - | |
| Cpe16g00767 | 612 | Pfam | Protein of unknown function (DUF688) | 7 | 428 | IPR007789 | - | |
| Cpe16g00767 | 612 | PANTHER | N-METHYLTRANSFERASE, PUTATIVE (DUF688)-RELATED | 7 | 608 | - | - | |
| Cpe16g00767 | 612 | MobiDBLite | consensus disorder prediction | 351 | 378 | - | - | |
| Cpe16g00767 | 612 | MobiDBLite | consensus disorder prediction | 68 | 128 | - | - | |
| Cpe16g00767 | 612 | MobiDBLite | consensus disorder prediction | 413 | 455 | - | - | |
| Cpe16g00767 | 612 | MobiDBLite | consensus disorder prediction | 98 | 121 | - | - | |
| Cpe16g00767 | 612 | MobiDBLite | consensus disorder prediction | 307 | 378 | - | - | |
| Cpe16g00767 | 612 | MobiDBLite | consensus disorder prediction | 524 | 579 | - | - | |
| Cpe16g00767 | 612 | MobiDBLite | consensus disorder prediction | 309 | 333 | - | - | |
| Cpe16g00767 | 612 | PANTHER | N-METHYLTRANSFERASE, PUTATIVE (DUF688)-RELATED | 7 | 608 | - | - |
Event-related genes
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| Cpe04g00712 | Cpe16g00767 | CCT | |
| Cpe15g00730 | Cpe16g00767 | CCT | |
| Cpe04g00712 | Cpe16g00767 | ECH | |
| Cpe15g00730 | Cpe16g00767 | ECH | |
| Cpe05g01426 | Cpe16g00767 | CST |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cpe04g00791 | Cpe-Chr4:7518387 | Cpe16g00767 | Cpe-Chr16:7627807 | 2.29E-84 | dispersed | |
| Cpe16g00767 | Cpe-Chr16:7627807 | Cpe20g00465 | Cpe-Chr20:2693794 | 4.74E-07 | dispersed | |
| Cpe15g00833 | Cpe-Chr15:8237146 | Cpe16g00767 | Cpe-Chr16:7627807 | 2.65E-80 | wgd | |
| Cpe16g00767 | Cpe-Chr16:7627807 | Cpe05g01513 | Cpe-Chr5:10422933 | 1.26E-25 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cpe16g00767 | - | - | cmax:111483832 | 1071.61 |