Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe16g00777 ATGGGTTGCATCTGTTCTAAGGTTTTACCGGATGAGTGTAGTGAACATGAACATGATAGCTCCAATAGAACATATTCCTCCAGAAACCACCTCTCTGAATTGAAAATATCAAGAGCTGGCTTTCCCAAATCAGAGAAGATTTGGGAAAAAGATAGACTAGATTGTAGCGATGTTTCGGTTATGTTGTTCGATACGAAGGCGAACGGTCCTCTGCGCTTGCACGGTGAGCTTCCTAATGAGAGGAAGAAGAAGGCAGACGTCCCTGATATCACCATTGTCACTCATCCATGTATGGGAAAGATTCCGAACGCTACCGAGGCTGAGCAGGTTGCTGCTGGTTGGCCGAGTTGGCTGGCTAAGATGGCTGGTGAGGCCATCAAAGGGTGGCTGCCCAAACATGCCAATAACTTCATCAAATTGGCCAGGGAACCTACAGCAGTGTGTATAAAGCTCGATAAAGTTGTGGCCTTGAAACGGATCAGGTTCGACAATCAAGACGCCGAGAGTATCGCGTTCATGGCTAGGGAAATCCTTGTTTTGCGAAGGCTTGATCATCCAAATATAGTTAAGTTGGAAGGTTTGATCACATCACAAACATCATGTCACATGTACCTTGTTTTTGAATATATGGAACATGATCTTACAGGACTTGCATCTCGGCCTGGCACGTCGTTCACCGAGCCACAGATGAAGTGTTACATGAAGCAACTTTTGAGCGGACTTGCTCACTGTCACAGTAATGGGGTTCTGCATAGAGACATAAAGGGCTCAAATCTTCTTATTGACAACAATGGCGTTTTGAAGATAGCAGATTTTGGGTTGGCTGTTTTCTATGATTCACAGTCGATGGTTCCCATGACGAGTCGTGTAATAACGCTCTGGTATCGACCACCGGAACTTTTACTTGGAGCATCTCAATATGGAGCTGAAGTTGACTTATGGAGTGCTGGTTGCATTCTAGGAGAGTTATATGCCGGCAAGCCTATCTTGCCAGGAAAAACAGAGGTTGAACAACTACACAAAATATTCAAGCTATGTGGTTCCCCCTCCAAGGAATATTGGAGAAACTTGCATTTGAAGCATTCAACAAGCATGAAGCCTCCGCAGTCGTACGAACGATGTCTTCGAGAAAGATATAACGACATTCCTCATGCTGCTATTGAGCTTATGGACAATTTGCTGACTATAGATCCTGCAGAGCGAGGAACTGCAGCTTCTGCGCTCGACAGCGAGTTCTTTAGCACAAGGCCCTTGCCATGCAATCCTTCAAGTTTGCCAAAGTACCCTCCTAGCAAAGAAATCAATTCAAAACTGCGGGAAGAGGAAGCAAGAAGGCAACGAGGAGTAGGTGGCGGGAGAAGCCGAGCAGTCGACGCCGAACTAAAAGGACTGAAGCAATCTCGGGTAGTTCCTGCTGCAAAGGCTAACTCTGAGTTGGTTATTTCACTTCTGAGAAAACAAAGTTTTTCGATCTCGAAGTACCGGAGCGAAAAGTGTTCTTACGGATTGGTGTCGAAGAGAACCTCAAGTTCAGGACCTATAATAACTCAGAGACCAGGATTTACAAACTCGAAAACGGTACCGAAACACGTTTCAACGATTCCGAGGGAGTGTTTAACATCATCTGGGCCAATTGAGTTTGTTTCTTACAAACATGTCCGAGAAAGAAATGGAGTTTCAAGGCCAGAATCAATGAGCCAAGACAAAACTCTGATAGTGTTGGCTTCCTACAAGAAAAGGGAAGAAAAAAGAAACATAGAAGCCAAGCCACCACCGGTTCTGTTCTTTGAGCTAATTTTCTGGGCTGCAATTATGGGTTGCCAATGTTCCAAGCCATCTGTTCATGAAGATGAACAGAGCAGAGCCTCTGAGAAATTGCCTTCACTAAAGGCTTCAGGGGTTAATTTTTCAAGGAAAGAGGAGGATGTGCAATTCAATTCCGTGAAGAGGGACCAAGGTGTTCGACTAAATGCCTCACAGAGAGCTGATGGTATTCGATCGAAGGTGAAACCAGAAGGTGGTGACTTGAAGGTTGCTTACTTAGATAAGAAGGTCAACGGCTCAAACAGGGTACATGATGATCAAATTGAGAAAAAGAAGAGGGAGAGGTTGGAAGCAGCCATTTCTGCTAATTATCCTGGTAAAGGAAGTATTCCAAAGGCTATGGAAGCTGAGCAAGTTGCAGCTGGTTGGCCTAGCTGGCTTTCCTCTGTGGCTGGTGAAGCGCTCGAGGGATGGCTGCCACGAAAAGCCGAAACGTTCGAGAAACTAGACAAGATAGGACAAGGAACATATAGTAGTGTTTACAAGGCTCGTGATATCATTCACGGTAAACTAGTCGCTCTAAAACGAGTTCGATTCGATAATCTTGATGTGGAGAGTGTGAAGTTTATGGCCCGGGAAATCCTTATCCTACGTAGACTTGATCATCCAAACGTTATAAAATTGGAAGGCTTGATTACGTCTCCGCGATCATGTAGCTTGTACCTCATTTTTGAGTATATGGAGCACGATCTTACAGGGCTCGCATCTCGGCCCGGCGTCAAGTTCAGCGAACCACAGGTTAAATGCTATATGCAACAACTTCTAAGGGGGCTTGATTATTGCCACAGTCATGGTGTCCTCCACCGCGATATAAAGGGTTCGAATCTCCTAATCGATGCCAATGGTATCTTGAAGATTGCAGATTTTGGACTAGCAAGCCATTTTGACCCTCATAATCACGTTCCCTTAACGAGTCGCGTAGTGACTCTATGGTACCGACCGCCCGAACTTCTTCTTGGAGCTTCTCATTATGGTGTTGCAGTGGACCTGTGGAGTACTGGTTGCATACTAGCTGAGCTATATGCTGGGAAGCCCATCTTACCTGGAAAAACAGAGGTCGAACAGTTGCATAAGATCTTTAAACTTTGTGGGTCGCCACCCGAGAATTATTGGAGGAAATTGCAGTTACCTCATTCAACTGGATTCAAGACGGCTCAGCCATACCGACGTTGTGTCGTGGAAATGCTCAAGGATTTCCCATCTTCTGCGGTGGCTCTTGTGGATAAGTTGCTATCTATTGATCCTGCTCATCGAGGAACTGCAGCCGCTGCCTTAAAGAGCGAGTTTTTTACGACTAAACCGCTTGCGTGCGACCCTTCGAGTTTGCCCAAATATCCTCCGAGCAAAGAGATCGATGCAAAATTCCACAGCTGCAGGAGTTTCAAAGGCGGAATCGGAGTGCTCAATCCGCATGGGGACGAAACAGTTTCCGGGTTTTGTATTGCTCCTCCCAGACAAAACCAATCTGTCACAGAAATTTGTTCAGATACAGGCAGGATTTCACATTCAGGACCGCTAATTAGCAGACCAGATTGGATGAAATCAAGAAAGCAACTTGATGATCATTCAATGTTGCTTGATGGATCCAATCTCTCAGTGTTATCCCGTTTAGTTGCGACGAGGTCTAATACATCTGAACATCCCTACGATAGACCGGGTCCATCACGATCAGAAGTAGGCAGATTGCCTGACTTCGTTAGGGAGTCTGAGTCAACAAGAAAGCAGGACCGAGAATTTTATGCACATCGTGGTGCAGATTCATACCGGATAGAAAATGAAAAAGCTCGTGCTAAAGAACAGTCCCCGTTTGCTTATGGGACAGACATGAACAAGCTTTATACCTCTGGTCCACTCCTTGGTCCATCAAACAACTTCGATAAAATTCTGAAAGAGAAAGACCGTCAAATTCAAGAATATGCTCGACAAGCACGACACGGTAAAGCTGCTAACATTCAGTCGAAGGGTTCGAGAGCAACAACTGGAAAACATCTCATGTTGAGCCATGGAGTATGA 3837 45.37 MGCICSKVLPDECSEHEHDSSNRTYSSRNHLSELKISRAGFPKSEKIWEKDRLDCSDVSVMLFDTKANGPLRLHGELPNERKKKADVPDITIVTHPCMGKIPNATEAEQVAAGWPSWLAKMAGEAIKGWLPKHANNFIKLAREPTAVCIKLDKVVALKRIRFDNQDAESIAFMAREILVLRRLDHPNIVKLEGLITSQTSCHMYLVFEYMEHDLTGLASRPGTSFTEPQMKCYMKQLLSGLAHCHSNGVLHRDIKGSNLLIDNNGVLKIADFGLAVFYDSQSMVPMTSRVITLWYRPPELLLGASQYGAEVDLWSAGCILGELYAGKPILPGKTEVEQLHKIFKLCGSPSKEYWRNLHLKHSTSMKPPQSYERCLRERYNDIPHAAIELMDNLLTIDPAERGTAASALDSEFFSTRPLPCNPSSLPKYPPSKEINSKLREEEARRQRGVGGGRSRAVDAELKGLKQSRVVPAAKANSELVISLLRKQSFSISKYRSEKCSYGLVSKRTSSSGPIITQRPGFTNSKTVPKHVSTIPRECLTSSGPIEFVSYKHVRERNGVSRPESMSQDKTLIVLASYKKREEKRNIEAKPPPVLFFELIFWAAIMGCQCSKPSVHEDEQSRASEKLPSLKASGVNFSRKEEDVQFNSVKRDQGVRLNASQRADGIRSKVKPEGGDLKVAYLDKKVNGSNRVHDDQIEKKKRERLEAAISANYPGKGSIPKAMEAEQVAAGWPSWLSSVAGEALEGWLPRKAETFEKLDKIGQGTYSSVYKARDIIHGKLVALKRVRFDNLDVESVKFMAREILILRRLDHPNVIKLEGLITSPRSCSLYLIFEYMEHDLTGLASRPGVKFSEPQVKCYMQQLLRGLDYCHSHGVLHRDIKGSNLLIDANGILKIADFGLASHFDPHNHVPLTSRVVTLWYRPPELLLGASHYGVAVDLWSTGCILAELYAGKPILPGKTEVEQLHKIFKLCGSPPENYWRKLQLPHSTGFKTAQPYRRCVVEMLKDFPSSAVALVDKLLSIDPAHRGTAAAALKSEFFTTKPLACDPSSLPKYPPSKEIDAKFHSCRSFKGGIGVLNPHGDETVSGFCIAPPRQNQSVTEICSDTGRISHSGPLISRPDWMKSRKQLDDHSMLLDGSNLSVLSRLVATRSNTSEHPYDRPGPSRSEVGRLPDFVRESESTRKQDREFYAHRGADSYRIENEKARAKEQSPFAYGTDMNKLYTSGPLLGPSNNFDKILKEKDRQIQEYARQARHGKAANIQSKGSRATTGKHLMLSHGV 1278
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 7693043 7701549 - Cp4.1LG16g07790.1 Cpe16g00777 483152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe16g00777 1278 PANTHER CELL DIVISION PROTEIN KINASE 89 500 - -
Cpe16g00777 1278 ProSiteProfiles Protein kinase domain profile. 754 1038 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe16g00777 1278 SUPERFAMILY Protein kinase-like (PK-like) 749 1044 IPR011009 -
Cpe16g00777 1278 ProSiteProfiles Protein kinase domain profile. 116 413 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe16g00777 1278 Gene3D Transferase(Phosphotransferase) domain 1 212 450 - -
Cpe16g00777 1278 Gene3D Transferase(Phosphotransferase) domain 1 837 1069 - -
Cpe16g00777 1278 Gene3D Phosphorylase Kinase; domain 1 145 211 - -
Cpe16g00777 1278 Pfam Protein kinase domain 754 1038 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe16g00777 1278 Pfam Protein kinase domain 151 413 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe16g00777 1278 SUPERFAMILY Protein kinase-like (PK-like) 146 420 IPR011009 -
Cpe16g00777 1278 ProSitePatterns Serine/Threonine protein kinases active-site signature. 249 261 IPR008271 GO:0004672|GO:0006468
Cpe16g00777 1278 CDD STKc_CDK9_like 146 413 - -
Cpe16g00777 1278 ProSitePatterns Serine/Threonine protein kinases active-site signature. 874 886 IPR008271 GO:0004672|GO:0006468
Cpe16g00777 1278 SMART serkin_6 145 413 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe16g00777 1278 SMART serkin_6 754 1038 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe16g00777 1278 ProSitePatterns Protein kinases ATP-binding region signature. 760 783 IPR017441 GO:0005524
Cpe16g00777 1278 Gene3D Phosphorylase Kinase; domain 1 741 836 - -
Cpe16g00777 1278 PANTHER BINDING PROTEIN, PUTATIVE-RELATED 691 1233 - -
Cpe16g00777 1278 PANTHER BINDING PROTEIN, PUTATIVE-RELATED 89 500 - -
Cpe16g00777 1278 CDD STKc_CDK9_like 754 1038 - -
Cpe16g00777 1278 MobiDBLite consensus disorder prediction 1150 1182 - -
Cpe16g00777 1278 PANTHER CELL DIVISION PROTEIN KINASE 691 1233 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe15g00808 Cpe16g00777 CCT
Cpe04g00781 Cpe16g00777 CCT
Cpe15g00808 Cpe16g00777 ECH
Cpe04g00781 Cpe16g00777 ECH
Cpe05g01500 Cpe16g00777 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe01g00492 Cpe-Chr1:2843378 Cpe16g00777 Cpe-Chr16:7693043 1.08E-122 dispersed
Cpe14g00334 Cpe-Chr14:2027755 Cpe16g00777 Cpe-Chr16:7693043 0 dispersed
Cpe16g00777 Cpe-Chr16:7693043 Cpe20g00292 Cpe-Chr20:1630422 2.41E-163 dispersed
Cpe16g00777 Cpe-Chr16:7693043 Cpe05g01500 Cpe-Chr5:10337744 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
62914 PF00069 Pkinase 1.50E-67 CL0016 Cpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe16g00777 - - csv:101207826 1197.96