Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cpe16g00796 | ATGCTCCGAAATGGGTTAGCAGTCCTAGCCAAAGCCACATCTTTTCTCTCCCTCTCTATTGTTATACCTCAGAAGATGACTACGTTAGCCAGTACTTCTGAAATTGTTGAATCAACAGAAGAAATTGATTCCGAGAAAGCTGGTACGAGTTACATGCTAGATGTTGGAAAAAGGTTTTCTATAGAGGATGACATTAACCATCTGTTTCAGGCAATTGATATCAGAACTTTACGTAAGAGGGCAGGGCAGCAACGTGAAGTTGATAAAGATGCTTTGCGAAAGAGTGCGATGAAAAGACCGGTTAGAGTAGGTTCATCTCACATGGCAGGGATAGGAATTTCTGAACCTGCAAGTTTGAAGCAGGCTTTGAGAGGCTTATGCATATCTCAGGCTGCAGAAATGGCTGCTTCGAAGAGGTTAACAAGGTTGGTAGGTTCACCCAGAATCTCTGAAGCAGGAACTATCAAGAGATTGTATAGGGCTGTGGTGGTTGAGGCCAATGGATCTGGTGTTCCTGTAAATGAAAGCAGAGCAAATTTGGTAGAAATCTCCATTGTTTCAGAAAGAATCATATCAACTTCTCAAAATAAGATGCCTGAGTCGTTACGTAAAACTGAGACAGATATATCAAACCATGTAGCCGAGTCTTCTTCTTTCAAGGATACTGGGGTATCAGAAGAGGCGAGTGTGGATAGAGTGATGTCGAAGGATCTTGTAGTTAATATGGCTACTGAGGTGACAAGTATAAAGGCACCTGGTGAAGTGGGAGAACTTAAATCTCCTTCCTTTACTCCTCCTGGTGAGAAGGATCTGGCTGTGAACAGCATGGCTATTTCCTCAACTGAAGATTTAACAAAAGATTCAGTACCGAAGAAGGAGGAGAGAGGTACAATGCGTTGTTTATCTTCTCTATCAAGCTCGGGATCTGTTGTCAAGCTGAACAAATCAGCTTTCAATAATACACGTTTCATCAAACCTATTTTCAGGTCCAAGAGTTTTATCAAGAAGAAAGCAAAACTTGAACCAAATTCCTCCCCTAGCGTGTTCGATGGGTGCACGGAAAAGCTTGACACTGATTTGGGTCCCATAGCAGAAAAATCTGAGAACCAGATGCCAGAAAATGCACAGCATCATGAGAGTAAAGAAGAAGATAAAGGTTATTCTGTCTCTAGTAGCATAACTTTAGGTACTGAAGTAAATGGAAATGTAGTAAACACAGAATCTAGTAGACCTGGTACATCTCTCAACTGCTGTAACAGGAACAGACCAACTATTATGCCATTCGATGAGAGATCGAGATCGAGAGAAAAAGGGATGTTCTCTCAGAGCTCTAAAAGTAGTATTGGCGAATGTAGTAGTAGCCCAAGCATCAGTGGGGAAAGCATTCTTAGTGGATCAAGTCGTAGTGGAGTTAGGCCTCACATGTCAAAGGATTTGAAATGGGAAGCAATCCTCCACCTTCAGGATCAACAAAAATTCTTAGGTCTGAGAAATTTCAAGCTGCTAAGGAGACTTGGTCTCGGGGACATTGGGACCGTGTATCTTTCTGAGCTGTGTGGTTCAAGCTGTTTATTTGCTATTAAAGTGATGGACAAGGAGTTCTTGGCAAGCAGGAAAAAAATACTTCGGGCACAAACTGAGAGAGAGATACTGCAAATGCTCGACCATCCATTTCTTCCTACATTATATGCCCATTTTGAGACGGATAAGCACTCATGCTTGGTCATGGACTACTGTCCTGGTGGAGATCTCCATGTGCTGCGACAGAAGCAACCATGCAAGAGTTTCTCTGAGCGTGCAGTCAGGTTCTATGTAGCCGAAGTTCTTCTTGCCCTGGAGTACTTACATATGCTAGGAGTTGTTTACCGTGACCTGAAACCCGAAAATGTTCTGGTTCGAGAAGATGGGCACATCATGCTCACGGATTTTGATTTGTCCCTTAGATGTTCTTTTAACCCAACGCTGCTTCAATCATCATCTCCAGTTGTGGAATCCACTAAGAGGACTCTGAATCCCTGTGATGAATCTAGTTGCATTGACCCTTTCTGCCTCCATCCATCCTGGCAGCTTATTGTCGAACCAACTGGTGCGCGGTCCAATTCATTTGTAGGAACCCACGAATACCTTGCTCCTGAGATTGTCAAGGGTGATAGCCATGGGAGTGCTGTTGATTGGTGGACTTACGGGATATTCCTGTTTGAGCTTCTATATGGTAAGACTCCCTTCAAAGGTTCAGGAAATGAGGACACATTAGCGAACATAGTATCCCAACCTCTCAAGTTCCCCGATTGCCCTATAGTTAGTTTCCATGCAAGAGACCTGATCAGATGTCTGCTGGCCAAGGAGCCCGAAAACCGATTAGGCTCAACAAAAGGGGCTATCGAGATTAAGCAGCATCCGTTTTTTGAAGGCCTCAACTGGGCTCTGATACGTTGTGCAGCTCCCCCCGAGCTTCCTAAGTTTTTCGACGGTGGAACTGGTGCAATGCCAATGGATTCTGGGGAGAGTACGAAGCATAGAGATCTCGAGAATATGGAAGCAGATGCAGCAATCTTTGACCTGTTTTAG | 2568 | 43.85 | MLRNGLAVLAKATSFLSLSIVIPQKMTTLASTSEIVESTEEIDSEKAGTSYMLDVGKRFSIEDDINHLFQAIDIRTLRKRAGQQREVDKDALRKSAMKRPVRVGSSHMAGIGISEPASLKQALRGLCISQAAEMAASKRLTRLVGSPRISEAGTIKRLYRAVVVEANGSGVPVNESRANLVEISIVSERIISTSQNKMPESLRKTETDISNHVAESSSFKDTGVSEEASVDRVMSKDLVVNMATEVTSIKAPGEVGELKSPSFTPPGEKDLAVNSMAISSTEDLTKDSVPKKEERGTMRCLSSLSSSGSVVKLNKSAFNNTRFIKPIFRSKSFIKKKAKLEPNSSPSVFDGCTEKLDTDLGPIAEKSENQMPENAQHHESKEEDKGYSVSSSITLGTEVNGNVVNTESSRPGTSLNCCNRNRPTIMPFDERSRSREKGMFSQSSKSSIGECSSSPSISGESILSGSSRSGVRPHMSKDLKWEAILHLQDQQKFLGLRNFKLLRRLGLGDIGTVYLSELCGSSCLFAIKVMDKEFLASRKKILRAQTEREILQMLDHPFLPTLYAHFETDKHSCLVMDYCPGGDLHVLRQKQPCKSFSERAVRFYVAEVLLALEYLHMLGVVYRDLKPENVLVREDGHIMLTDFDLSLRCSFNPTLLQSSSPVVESTKRTLNPCDESSCIDPFCLHPSWQLIVEPTGARSNSFVGTHEYLAPEIVKGDSHGSAVDWWTYGIFLFELLYGKTPFKGSGNEDTLANIVSQPLKFPDCPIVSFHARDLIRCLLAKEPENRLGSTKGAIEIKQHPFFEGLNWALIRCAAPPELPKFFDGGTGAMPMDSGESTKHRDLENMEADAAIFDLF | 855 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
16 | 7783762 | 7788831 | - | Cp4.1LG16g07930.1 | Cpe16g00796 | 483171 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cpe16g00796 | 855 | SMART | serkin_6 | 499 | 802 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cpe16g00796 | 855 | CDD | STKc_phototropin_like | 499 | 820 | - | - | |
Cpe16g00796 | 855 | PANTHER | FLIPPASE KINASE 1-RELATED | 26 | 830 | - | - | |
Cpe16g00796 | 855 | MobiDBLite | consensus disorder prediction | 439 | 471 | - | - | |
Cpe16g00796 | 855 | MobiDBLite | consensus disorder prediction | 371 | 386 | - | - | |
Cpe16g00796 | 855 | MobiDBLite | consensus disorder prediction | 367 | 390 | - | - | |
Cpe16g00796 | 855 | Pfam | Protein kinase domain | 500 | 802 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cpe16g00796 | 855 | Gene3D | Transferase(Phosphotransferase) domain 1 | 697 | 816 | - | - | |
Cpe16g00796 | 855 | ProSiteProfiles | Protein kinase domain profile. | 499 | 802 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cpe16g00796 | 855 | SUPERFAMILY | Protein kinase-like (PK-like) | 474 | 820 | IPR011009 | - | |
Cpe16g00796 | 855 | Gene3D | Transferase(Phosphotransferase) domain 1 | 579 | 648 | - | - | |
Cpe16g00796 | 855 | MobiDBLite | consensus disorder prediction | 402 | 421 | - | - | |
Cpe16g00796 | 855 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 620 | 632 | IPR008271 | GO:0004672|GO:0006468 | |
Cpe16g00796 | 855 | MobiDBLite | consensus disorder prediction | 402 | 471 | - | - | |
Cpe16g00796 | 855 | MobiDBLite | consensus disorder prediction | 281 | 300 | - | - | |
Cpe16g00796 | 855 | Gene3D | Phosphorylase Kinase; domain 1 | 497 | 578 | - | - | |
Cpe16g00796 | 855 | PANTHER | SERINE/THREONINE-PROTEIN KINASE D6PKL1 ISOFORM X1 | 26 | 830 | - | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cpe05g00421 | Cpe16g00796 | CCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cpe16g00570 | Cpe-Chr16:6489886 | Cpe16g00796 | Cpe-Chr16:7783762 | 1.94E-61 | dispersed | |
Cpe16g00796 | Cpe-Chr16:7783762 | Cpe19g00458 | Cpe-Chr19:4046135 | 0 | dispersed | |
Cpe10g00271 | Cpe-Chr10:1615268 | Cpe16g00796 | Cpe-Chr16:7783762 | 0 | wgd | |
Cpe16g00796 | Cpe-Chr16:7783762 | Cpe05g00421 | Cpe-Chr5:2400344 | 0 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
62915 | PF00069 | Pkinase | 1.10E-57 | CL0016 | Cpe | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cpe16g00796 | - | - | cpep:111777395 | 1563.51 |