Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe16g00796 ATGCTCCGAAATGGGTTAGCAGTCCTAGCCAAAGCCACATCTTTTCTCTCCCTCTCTATTGTTATACCTCAGAAGATGACTACGTTAGCCAGTACTTCTGAAATTGTTGAATCAACAGAAGAAATTGATTCCGAGAAAGCTGGTACGAGTTACATGCTAGATGTTGGAAAAAGGTTTTCTATAGAGGATGACATTAACCATCTGTTTCAGGCAATTGATATCAGAACTTTACGTAAGAGGGCAGGGCAGCAACGTGAAGTTGATAAAGATGCTTTGCGAAAGAGTGCGATGAAAAGACCGGTTAGAGTAGGTTCATCTCACATGGCAGGGATAGGAATTTCTGAACCTGCAAGTTTGAAGCAGGCTTTGAGAGGCTTATGCATATCTCAGGCTGCAGAAATGGCTGCTTCGAAGAGGTTAACAAGGTTGGTAGGTTCACCCAGAATCTCTGAAGCAGGAACTATCAAGAGATTGTATAGGGCTGTGGTGGTTGAGGCCAATGGATCTGGTGTTCCTGTAAATGAAAGCAGAGCAAATTTGGTAGAAATCTCCATTGTTTCAGAAAGAATCATATCAACTTCTCAAAATAAGATGCCTGAGTCGTTACGTAAAACTGAGACAGATATATCAAACCATGTAGCCGAGTCTTCTTCTTTCAAGGATACTGGGGTATCAGAAGAGGCGAGTGTGGATAGAGTGATGTCGAAGGATCTTGTAGTTAATATGGCTACTGAGGTGACAAGTATAAAGGCACCTGGTGAAGTGGGAGAACTTAAATCTCCTTCCTTTACTCCTCCTGGTGAGAAGGATCTGGCTGTGAACAGCATGGCTATTTCCTCAACTGAAGATTTAACAAAAGATTCAGTACCGAAGAAGGAGGAGAGAGGTACAATGCGTTGTTTATCTTCTCTATCAAGCTCGGGATCTGTTGTCAAGCTGAACAAATCAGCTTTCAATAATACACGTTTCATCAAACCTATTTTCAGGTCCAAGAGTTTTATCAAGAAGAAAGCAAAACTTGAACCAAATTCCTCCCCTAGCGTGTTCGATGGGTGCACGGAAAAGCTTGACACTGATTTGGGTCCCATAGCAGAAAAATCTGAGAACCAGATGCCAGAAAATGCACAGCATCATGAGAGTAAAGAAGAAGATAAAGGTTATTCTGTCTCTAGTAGCATAACTTTAGGTACTGAAGTAAATGGAAATGTAGTAAACACAGAATCTAGTAGACCTGGTACATCTCTCAACTGCTGTAACAGGAACAGACCAACTATTATGCCATTCGATGAGAGATCGAGATCGAGAGAAAAAGGGATGTTCTCTCAGAGCTCTAAAAGTAGTATTGGCGAATGTAGTAGTAGCCCAAGCATCAGTGGGGAAAGCATTCTTAGTGGATCAAGTCGTAGTGGAGTTAGGCCTCACATGTCAAAGGATTTGAAATGGGAAGCAATCCTCCACCTTCAGGATCAACAAAAATTCTTAGGTCTGAGAAATTTCAAGCTGCTAAGGAGACTTGGTCTCGGGGACATTGGGACCGTGTATCTTTCTGAGCTGTGTGGTTCAAGCTGTTTATTTGCTATTAAAGTGATGGACAAGGAGTTCTTGGCAAGCAGGAAAAAAATACTTCGGGCACAAACTGAGAGAGAGATACTGCAAATGCTCGACCATCCATTTCTTCCTACATTATATGCCCATTTTGAGACGGATAAGCACTCATGCTTGGTCATGGACTACTGTCCTGGTGGAGATCTCCATGTGCTGCGACAGAAGCAACCATGCAAGAGTTTCTCTGAGCGTGCAGTCAGGTTCTATGTAGCCGAAGTTCTTCTTGCCCTGGAGTACTTACATATGCTAGGAGTTGTTTACCGTGACCTGAAACCCGAAAATGTTCTGGTTCGAGAAGATGGGCACATCATGCTCACGGATTTTGATTTGTCCCTTAGATGTTCTTTTAACCCAACGCTGCTTCAATCATCATCTCCAGTTGTGGAATCCACTAAGAGGACTCTGAATCCCTGTGATGAATCTAGTTGCATTGACCCTTTCTGCCTCCATCCATCCTGGCAGCTTATTGTCGAACCAACTGGTGCGCGGTCCAATTCATTTGTAGGAACCCACGAATACCTTGCTCCTGAGATTGTCAAGGGTGATAGCCATGGGAGTGCTGTTGATTGGTGGACTTACGGGATATTCCTGTTTGAGCTTCTATATGGTAAGACTCCCTTCAAAGGTTCAGGAAATGAGGACACATTAGCGAACATAGTATCCCAACCTCTCAAGTTCCCCGATTGCCCTATAGTTAGTTTCCATGCAAGAGACCTGATCAGATGTCTGCTGGCCAAGGAGCCCGAAAACCGATTAGGCTCAACAAAAGGGGCTATCGAGATTAAGCAGCATCCGTTTTTTGAAGGCCTCAACTGGGCTCTGATACGTTGTGCAGCTCCCCCCGAGCTTCCTAAGTTTTTCGACGGTGGAACTGGTGCAATGCCAATGGATTCTGGGGAGAGTACGAAGCATAGAGATCTCGAGAATATGGAAGCAGATGCAGCAATCTTTGACCTGTTTTAG 2568 43.85 MLRNGLAVLAKATSFLSLSIVIPQKMTTLASTSEIVESTEEIDSEKAGTSYMLDVGKRFSIEDDINHLFQAIDIRTLRKRAGQQREVDKDALRKSAMKRPVRVGSSHMAGIGISEPASLKQALRGLCISQAAEMAASKRLTRLVGSPRISEAGTIKRLYRAVVVEANGSGVPVNESRANLVEISIVSERIISTSQNKMPESLRKTETDISNHVAESSSFKDTGVSEEASVDRVMSKDLVVNMATEVTSIKAPGEVGELKSPSFTPPGEKDLAVNSMAISSTEDLTKDSVPKKEERGTMRCLSSLSSSGSVVKLNKSAFNNTRFIKPIFRSKSFIKKKAKLEPNSSPSVFDGCTEKLDTDLGPIAEKSENQMPENAQHHESKEEDKGYSVSSSITLGTEVNGNVVNTESSRPGTSLNCCNRNRPTIMPFDERSRSREKGMFSQSSKSSIGECSSSPSISGESILSGSSRSGVRPHMSKDLKWEAILHLQDQQKFLGLRNFKLLRRLGLGDIGTVYLSELCGSSCLFAIKVMDKEFLASRKKILRAQTEREILQMLDHPFLPTLYAHFETDKHSCLVMDYCPGGDLHVLRQKQPCKSFSERAVRFYVAEVLLALEYLHMLGVVYRDLKPENVLVREDGHIMLTDFDLSLRCSFNPTLLQSSSPVVESTKRTLNPCDESSCIDPFCLHPSWQLIVEPTGARSNSFVGTHEYLAPEIVKGDSHGSAVDWWTYGIFLFELLYGKTPFKGSGNEDTLANIVSQPLKFPDCPIVSFHARDLIRCLLAKEPENRLGSTKGAIEIKQHPFFEGLNWALIRCAAPPELPKFFDGGTGAMPMDSGESTKHRDLENMEADAAIFDLF 855
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 7783762 7788831 - Cp4.1LG16g07930.1 Cpe16g00796 483171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe16g00796 855 SMART serkin_6 499 802 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe16g00796 855 CDD STKc_phototropin_like 499 820 - -
Cpe16g00796 855 PANTHER FLIPPASE KINASE 1-RELATED 26 830 - -
Cpe16g00796 855 MobiDBLite consensus disorder prediction 439 471 - -
Cpe16g00796 855 MobiDBLite consensus disorder prediction 371 386 - -
Cpe16g00796 855 MobiDBLite consensus disorder prediction 367 390 - -
Cpe16g00796 855 Pfam Protein kinase domain 500 802 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe16g00796 855 Gene3D Transferase(Phosphotransferase) domain 1 697 816 - -
Cpe16g00796 855 ProSiteProfiles Protein kinase domain profile. 499 802 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe16g00796 855 SUPERFAMILY Protein kinase-like (PK-like) 474 820 IPR011009 -
Cpe16g00796 855 Gene3D Transferase(Phosphotransferase) domain 1 579 648 - -
Cpe16g00796 855 MobiDBLite consensus disorder prediction 402 421 - -
Cpe16g00796 855 ProSitePatterns Serine/Threonine protein kinases active-site signature. 620 632 IPR008271 GO:0004672|GO:0006468
Cpe16g00796 855 MobiDBLite consensus disorder prediction 402 471 - -
Cpe16g00796 855 MobiDBLite consensus disorder prediction 281 300 - -
Cpe16g00796 855 Gene3D Phosphorylase Kinase; domain 1 497 578 - -
Cpe16g00796 855 PANTHER SERINE/THREONINE-PROTEIN KINASE D6PKL1 ISOFORM X1 26 830 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe05g00421 Cpe16g00796 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe16g00570 Cpe-Chr16:6489886 Cpe16g00796 Cpe-Chr16:7783762 1.94E-61 dispersed
Cpe16g00796 Cpe-Chr16:7783762 Cpe19g00458 Cpe-Chr19:4046135 0 dispersed
Cpe10g00271 Cpe-Chr10:1615268 Cpe16g00796 Cpe-Chr16:7783762 0 wgd
Cpe16g00796 Cpe-Chr16:7783762 Cpe05g00421 Cpe-Chr5:2400344 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
62915 PF00069 Pkinase 1.10E-57 CL0016 Cpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe16g00796 - - cpep:111777395 1563.51