Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe16g00797 ATGGAGTCTTCTCCGGACGACATCGCCGACGACCTCCAGAGCCTCAGCTTCAATTCCACGAACACCAACCGCAGCATCAGCTCCGGCTCCGAGACTACTCTCACCGCCTCCTCCTCATCCGTACACATCCCTTCTATTCTCAACAAGCCCCACGCGCCTTCTTCCGACCCTTGCTGGTCTGCTGTTAACCGGATCCGATCCGACTCGTCGTCTCGCCAACTCGCCTTCTCTGACCTTAAGTTCTTCAACCGCCTCGGTTCCGGCGACATTGGCTCCGTCTACCTCGCTGGCCTCAAGTCCACTGGAGCCGACGGATGCCTGTTCGCGGCGAAGGTAATGGATAAGAAGGAACTGGCGAGTCGGAGTAAAGAAGGCAGAGCAAGGACTGAGAGGGAGATTTTGGAGTCTTTAGACCATCCGTTTCTTCCGGCACTCTATGCTAGTATCGACTCGCCTAAGTGGCTCTGTCTCTTGACGGAGTTCTGTCCCGGCGGTGACCTTCATGTTCTCCGGCAACGGCAGCCTAACAAACGATTCGATGAACTCGCCGTAAGATTCTATGCATCTGAGATTGTGGTTGCTATCGAGTATCTTCACATGATGGGGATCGTTTACCGTGATCTCAAGCCTGAAAATGTGCTGGTACGATCGGACGGCCATATCATGCTCACTGATTTTGATCTCTCCTTGAAGTGTGAGGATTCAACGGCGACCCCACAGGTTATCAATGCTAAAAATCCGACAAATGGCACCGCCCTGCCAAAGGACTACCAAATTGATGCCCCTCCTTTTGCATCATCCTCCTGCATACTTCCAAACTGTATAGTCCCCGCCGTGTCATGTTTCAACCCAAAACGCAAGCGCAAGAAGAAGTCTGGTCGACGCAATGGACCTGAGTTTGTTGCCGAACCGGTCGACGTCCGGTCAATGTCATTTGTTGGCACCCACGAGTACTTGGCACCAGAGATTGTCTCCGGTGAGGGCCATGGAAGCGCAGTGGACTGGTGGACTCTAGGGGTGTTTGTGTTTGAGTTGTTTTATGGAGTGACGCCCTTTAGAGGCATGGACAATGAGCTCACCTTGGCCAATATAGTGGCCAGAGCCCTTGAGTTTCCTAAAGAACCGGCAGTGCCAGTGGCGGCAAAGGACCTTATTTCCCAGTTACTGGTCAAAGACCCAGCGAGGCGGCTGGGGTCAACGACAGGGTCGTCGGTGATCAAGCACCATTCATTTTTCCAAGGGGTGAATTGGGCATTATTGAGATGTACTACGCCACCATTTATTCCCCCACCATTTAGTAGAGAAAAAGTTGCATTGGATGAAAGCTGCCCTGTGGCCCCAATCGAGTATTATTAG 1356 52.51 MESSPDDIADDLQSLSFNSTNTNRSISSGSETTLTASSSSVHIPSILNKPHAPSSDPCWSAVNRIRSDSSSRQLAFSDLKFFNRLGSGDIGSVYLAGLKSTGADGCLFAAKVMDKKELASRSKEGRARTEREILESLDHPFLPALYASIDSPKWLCLLTEFCPGGDLHVLRQRQPNKRFDELAVRFYASEIVVAIEYLHMMGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCEDSTATPQVINAKNPTNGTALPKDYQIDAPPFASSSCILPNCIVPAVSCFNPKRKRKKKSGRRNGPEFVAEPVDVRSMSFVGTHEYLAPEIVSGEGHGSAVDWWTLGVFVFELFYGVTPFRGMDNELTLANIVARALEFPKEPAVPVAAKDLISQLLVKDPARRLGSTTGSSVIKHHSFFQGVNWALLRCTTPPFIPPPFSREKVALDESCPVAPIEYY 451
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 7793278 7798827 + Cp4.1LG16g07840.1 Cpe16g00797 483172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe16g00797 451 Pfam Protein kinase domain 309 411 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe16g00797 451 Pfam Protein kinase domain 82 237 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe16g00797 451 PANTHER FLIPPASE KINASE 1-RELATED 3 451 - -
Cpe16g00797 451 SMART serkin_6 79 412 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe16g00797 451 PANTHER OS11G0150700 PROTEIN 3 451 - -
Cpe16g00797 451 ProSiteProfiles Protein kinase domain profile. 79 412 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe16g00797 451 Gene3D Transferase(Phosphotransferase) domain 1 308 430 - -
Cpe16g00797 451 Gene3D Transferase(Phosphotransferase) domain 1 166 240 - -
Cpe16g00797 451 Gene3D Phosphorylase Kinase; domain 1 78 165 - -
Cpe16g00797 451 ProSitePatterns Serine/Threonine protein kinases active-site signature. 203 215 IPR008271 GO:0004672|GO:0006468
Cpe16g00797 451 SUPERFAMILY Protein kinase-like (PK-like) 57 435 IPR011009 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe16g00797 Cpe-Chr16:7793278 Cpe10g01239 Cpe-Chr10:9546367 5.22E-147 dispersed
Cpe16g00797 Cpe-Chr16:7793278 Cpe10g00735 Cpe-Chr10:4209095 8.59E-148 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
62916 PF00069 Pkinase 1.70E-34 CL0016 Cpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe16g00797 K08286 - csv:101207262 853.973