Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe16g00804 ATGGCGAGCCACAGAGTCCAAGAAACCGCCCCTGCTTCAACCCATCACCATCCTCACAATTCACTTCTTTATGCAATCAACTACAACAATCCCTCCTCCACTTGCGAAGCTTTTGATATTGGAGAATTGGAAGAAGCAATTGTGTTACAAGAACACGAAGCTAAGAACAAACTGGATCATCACCAATCCAAACAAACCTTTTTCTCAGGCAGGCCTGCTGCTGCTGCTGCTGCTGCCGCTGCTGCTACTCTGGAAATGTTCCCTTCTTGGCCAATCAAATTCCAACAAACTCCCACAAGAAAGGGATGTGGTTCGATTTCAACATCACAGAAGCAACTTGATGCTAAGCAACTTGAGAGCAGTAGAATCAAGCTCACGCAGCTTGAACAAGACCTTCAACGGGCACGAACTCAGGGTTTGTTTCTTGGTGGCTGCGGTGGCGGCGGCGGCATTGTCAGCCCAGGAGGTGCAATGTTTGACATGGAATATGCAAGGTGGTTGGAAGAGGACCACCGGCACACGGCGGAGCTGCGGGGGGGACTGGAGGCACGCCTACCGGACGTGGAGCTGAGAATGAAAGTAGACGCATGCATTTGGCATTACGACCAAATTTTCCGGCTGAAAGGAGAGGCTGCTAAGTCCGACATCTTCCATCTCATCGCCGGCATCTGGATGTCTCCGGCCGAGCGTTGCTTCCTTTGGATTGGTGGATTCCGGCCCTCCGATCTCATCAAGATTTTGCTGTCACAATTGGACCCAATCACAGAACACCAAGTGGTGGAAATTTACAAGCTACAGCATTCGTCACAGCAGGCTGAAGATGCTTTATCCCAAGGCCTTGATCAGCTCCATCAGTCCTTGACGGACACCGTAGCCGGCGGTCCGGTCATCGACGGCATCAACCACATGGTTTTGGCCATGGACAAGATCTCTCATCTCCAAGGCTTTCTCCATCAGGCGGATATTTTAAGACAACAAACGCTTCACCAATTGCATAGGATGCTCACCGTCCGACAAGCAGCCAAATGTTTTATAGTCATTAGTGAATATTACACTAGATTACGAGCCCTAAGCTCCATATGGTCCTCTCGTCCAAAGGACTAA 1104 50.0 MASHRVQETAPASTHHHPHNSLLYAINYNNPSSTCEAFDIGELEEAIVLQEHEAKNKLDHHQSKQTFFSGRPAAAAAAAAAATLEMFPSWPIKFQQTPTRKGCGSISTSQKQLDAKQLESSRIKLTQLEQDLQRARTQGLFLGGCGGGGGIVSPGGAMFDMEYARWLEEDHRHTAELRGGLEARLPDVELRMKVDACIWHYDQIFRLKGEAAKSDIFHLIAGIWMSPAERCFLWIGGFRPSDLIKILLSQLDPITEHQVVEIYKLQHSSQQAEDALSQGLDQLHQSLTDTVAGGPVIDGINHMVLAMDKISHLQGFLHQADILRQQTLHQLHRMLTVRQAAKCFIVISEYYTRLRALSSIWSSRPKD 367
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 7840910 7845065 + Cp4.1LG16g08030.1 Cpe16g00804 483179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe16g00804 367 PANTHER TRANSCRIPTION FACTOR TGA9 116 367 - -
Cpe16g00804 367 PANTHER TRANSCRIPTION FACTOR TGA9 116 367 - -
Cpe16g00804 367 Pfam Seed dormancy control 174 248 IPR025422 GO:0006351|GO:0043565
Cpe16g00804 367 ProSiteProfiles DOG1 domain profile. 156 364 IPR025422 GO:0006351|GO:0043565
Cpe16g00804 367 Coils Coil 118 138 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe16g00804 Cpe-Chr16:7840910 Cpe20g00685 Cpe-Chr20:4812582 9.80E-101 dispersed
Cpe16g00804 Cpe-Chr16:7840910 Cpe08g01342 Cpe-Chr8:9665720 1.46E-99 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe16g00804 K14431 - csv:101223216 414.075