Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cpe16g00809 | ATGGCGGAAGAACATCGATGCCAAGCGCCGAAGCTCTGCGTTAATAACTGCGGATTCTTTGGGAGTCCGGCGACTCGAGATCTTTGTTCGAAGTGCTACCGAGATCTGCAGATGAAGGAACAACAATCCTCCTCCGCCAAGCTCGCGCTAAACCAAACCCTAACATCCGCCGTTTCGTCATCCTCGTTCTCGGATGCCGCTTTGTTAGATCTGAAACCGGCTTCAACAGAAGCGAACCAGCCACTGGTGGAGGTGGCAGAGAAGGCGCAGACGAGAGCGGAAGTGGCGCCGGAACCCGCACAGCAGCAGCCGAGCCGGTGTATGACGTGCAGGCGGCGCGTGGGATTGACAGGGTTTAAGTGCAGGTGCGGGATGGTGTACTGTGGGACTCACCGGTACCCGGAGCAACACGGGTGTGAATTTGACTTCAAGCAGATGGGGAAGGATCAGATCGCAAAAGCGAATCCGGTGGTGAAAGGAGAGAAACTGCAGAAGATCTGA | 501 | 55.89 | MAEEHRCQAPKLCVNNCGFFGSPATRDLCSKCYRDLQMKEQQSSSAKLALNQTLTSAVSSSSFSDAALLDLKPASTEANQPLVEVAEKAQTRAEVAPEPAQQQPSRCMTCRRRVGLTGFKCRCGMVYCGTHRYPEQHGCEFDFKQMGKDQIAKANPVVKGEKLQKI | 166 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
16 | 7859759 | 7860259 | - | Cp4.1LG16g08180.1 | Cpe16g00809 | 483184 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cpe16g00809 | 166 | SUPERFAMILY | AN1-like Zinc finger | 92 | 161 | IPR035896 | - | |
Cpe16g00809 | 166 | Pfam | A20-like zinc finger | 12 | 34 | IPR002653 | GO:0003677|GO:0008270 | |
Cpe16g00809 | 166 | ProSiteProfiles | Zinc finger A20-type profile. | 7 | 41 | IPR002653 | GO:0003677|GO:0008270 | |
Cpe16g00809 | 166 | SUPERFAMILY | Glucocorticoid receptor-like (DNA-binding domain) | 12 | 55 | - | - | |
Cpe16g00809 | 166 | Gene3D | - | 81 | 162 | IPR035896 | - | |
Cpe16g00809 | 166 | SMART | A20_3 | 10 | 34 | IPR002653 | GO:0003677|GO:0008270 | |
Cpe16g00809 | 166 | PANTHER | AN1-TYPE ZINC FINGER PROTEIN | 1 | 166 | - | - | |
Cpe16g00809 | 166 | Pfam | AN1-like Zinc finger | 107 | 143 | IPR000058 | GO:0008270 | |
Cpe16g00809 | 166 | PANTHER | ZINC FINGER A20 AND AN1 DOMAIN-CONTAINING STRESS-ASSOCIATED PROTEIN 3 | 1 | 166 | - | - | |
Cpe16g00809 | 166 | ProSiteProfiles | Zinc finger AN1-type profile. | 101 | 147 | IPR000058 | GO:0008270 | |
Cpe16g00809 | 166 | Gene3D | - | 1 | 62 | - | - | |
Cpe16g00809 | 166 | SMART | AN1_Zf_4 | 107 | 144 | IPR000058 | GO:0008270 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cpe10g00277 | Cpe-Chr10:1643495 | Cpe16g00809 | Cpe-Chr16:7859759 | 1.80E-58 | dispersed | |
Cpe16g00809 | Cpe-Chr16:7859759 | Cpe19g00465 | Cpe-Chr19:4108060 | 5.24E-60 | dispersed | |
Cpe16g00809 | Cpe-Chr16:7859759 | Cpe05g00411 | Cpe-Chr5:2318044 | 6.12E-95 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cpe16g00809 | - | - | csv:101219115 | 252.677 |