Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe16g00836 ATGGGCACTAGAAACTTATATTATCCTCATGGTCCCATCATATTGTATTTTCGGCCCATACTTAAGATCCAACTCGGCCCAATAAGAAAAGGGGATAGGCCCAATAAGAAAGGGGGAATAGGCCCAAACTATAGCGGCCGACTTGAGGGGCCCGGCCCAACCGTCGTCTCCAAAATCTTCTTCTTCTCTCTGTTTACCAGCGTTGAAGGAGTTTTGAGCGGTAAGGAAGATTGGACGGCGCGTCGAGCTGTTGTTCCTCAACGACAACTACGAATTAGAGATGGCAGCAATGAATTGGCCGTAGTTGAATACATGGATGAGATCGTTGAAGGAGTTTTGAGCGGTAAGGAAGATTGGACGGCGCGTCGAGCTGTTGTTCCTCAACGACAACTACGAATTAGAGGTGTGTTTCTCGAGAGCTACGAAATAGTCTTCCACCAGATACGGAAAGAAGGCTCCACCGTCGTGAAAGTGAGGGCCGACGGAAGCGGAGACTTCAAGACTGTCACCGAAGCCATCGCCAGCGTTCCAGCCGGTAACACCAAACGCGTCGTGATTTGGATAGGGGAAGGAGTTTATAAGGAGAAGCTTACGATCGAGAGAAATCAGCCCTTCATTACCCTTTACGGTTCCCCTAAGAATATGCCAAAATTGACATTCGATGGAGATTCCAAAAAATACGGCACCGTGTACAGTGGAACTTTGACCGTCGAGGCTGAGTATTTTGTTGCTGCCAATCTCGTGATCGAGAACACTTCTCCAAGACCGGATGCGAGAAAAGGAGGTCCGGCACTGGCGGCGAGAATCAGAGGGAATAAAGCCGCAATTTACAATTGCAAATTCCTAGGGTTCCAAGACACCCTGTGCGACGACGACGGGATGCATGTGTACAAGGATTGCATCATTGAAGGCACTGTGGACTTCATCTTCGGGAAGGCAACGTCCCTGTATTTGAACAGTCAGCTGAATGTGCTGGGAGAAGGGGGATTGGGAGTGATTGCAGCGCATTCAAGAGAAAAGGAAGACGACCCCAGTGGGTATGTGTTTGCGCATTGCAGCGTTACAGGCACTGGCGGGCCGAACACTTATTTGGCAAGATCCTGGAGGCCTTGGTCCAGAGTTGTGTTTGCCTACACCACCATTGCCGACATCCTTCATCCTGAAGGCTGGGACGACATGAACAACCCCGCTTTTGACAAGACGGTTTTCTTCGGAGAATTTAAGTGTTCGGGGCCGGGAGCGGAGACGAGCAAGCGTGTAAAATTCAGCAAACAGCTGAGTGAAGCACAAGCGAAACCCTTCATCAACCTTGATTACGTGCAGGCCCAAAATATCCACAATGCTGAGGCTTTAGCTCAAATAAATGCTCTGCTGCCTTACACCCTAGTTCAACGTTTCCGTAAATTCGACAAGCACCAAGTAGAGCTCCCCAAATATTTGAATCGGGCGCTATCGGTAGTCGCCGAATCAGCTCTGCTGCCTCTTCTACGAAACCAGCACGGCCGAGTAGATCAACCAGACATGTATAGTGCATTTCGGTTTGCACAAGCTGATATGACCCCCATAAAGGAAACGACATCAGGCTTTTTACCAAGCAGCCTCATTTCTGAGAACAAATTCAGAGACTCCAAGCAATCGTTTGTTTCAGAATATCCTCATCAGCAGCGTATTGCCAACATAGACATCAGAATCAAAACCCAACTTAAACACAACCCCATGAACCTCCATACCTTTGCAAATATCAAGCGAATCAGAACATATCTTGAGAACAAAAGGAAATGTATGGTCATCGAGTTGAACACCGAGTCGAACCATCCTGTTGTACGTCTGCAACCCATCAAGCGTCCCATTCCACTTAATATCTGGACCTTGATAAAGGGAGGGGAGTTTAGAGTAATTAGAGGGGAAATGAAGGAAGGCTCCACCGTCGTGAAAGTGAGGGCCGACGGAAGCGGAGACTTCAAGACTGTCACCGAAGCCATCGCCAGCGTTCCAGCCGGTAACACCAAACGCGTCGTGATTTGGATTGGGGAAGGAGTTTATAAGGAGAAGCTTACGATCGAGAGAAATCAGCCCTTCATTACCCTTTACGGTTCCCCTAAGAATATGCCGAAATTGACATTTGATGGAGATGCCAAAAAATACGGTACCGTTTACAGTGGAACTTTGACCGTGGAGGCTGATTATTTTGTTGCTGCCAATCTGGTGCTCGAGAACACTTCTCCAAGACCGCATGCCGGAAAAGGAGGTCCGGCATTGGCAGCGAGAATCAGAGGGAATAAAGCCGCAGTTTACAATTGCAAATTCATAGGGTTCCAAGACACCCTGTGCGACGACGACGGGCTGCATGTGTACAAGGATTGCTTCATTGAAGGCACCGTGGACTTCATCTTCGGGAAGGCAACGGCCCTGTATTTGAACAGTCAGCTGAATGTGGTGGGAGTCGGGGGATTGGGAGTGATTGCAGCGCATTCAAGAGAAAAGGAAGACGACCCCAGTGGATATGTGTTTGCGCATTGCAGCATTACAGGCACTGGCGGGCCGAACACTTATTTGGGAAGATCTTGGAGGCCCTGGTCCAGAGTTGTGTTTGCCTACACCACCATTGCCGACATCCTTCATCCTGAAGGCTGGGACGACATGAACAACCCCGCTTTTGACAAGACGGTTTTCTTTGGAGAATACAAGTGTTCGGGGCCGGGAGCGGAGACGAGCAAGCGTATAAAATTCAGCAGACAGCTGAGTGAAGCACAAGCAAAACCCTTCATCAACCTTGATTACGTGCAGGCTCAAAAGTGGCTGCTTCCTCCTCCCAAACTATAG 2823 49.06 MGTRNLYYPHGPIILYFRPILKIQLGPIRKGDRPNKKGGIGPNYSGRLEGPGPTVVSKIFFFSLFTSVEGVLSGKEDWTARRAVVPQRQLRIRDGSNELAVVEYMDEIVEGVLSGKEDWTARRAVVPQRQLRIRGVFLESYEIVFHQIRKEGSTVVKVRADGSGDFKTVTEAIASVPAGNTKRVVIWIGEGVYKEKLTIERNQPFITLYGSPKNMPKLTFDGDSKKYGTVYSGTLTVEAEYFVAANLVIENTSPRPDARKGGPALAARIRGNKAAIYNCKFLGFQDTLCDDDGMHVYKDCIIEGTVDFIFGKATSLYLNSQLNVLGEGGLGVIAAHSREKEDDPSGYVFAHCSVTGTGGPNTYLARSWRPWSRVVFAYTTIADILHPEGWDDMNNPAFDKTVFFGEFKCSGPGAETSKRVKFSKQLSEAQAKPFINLDYVQAQNIHNAEALAQINALLPYTLVQRFRKFDKHQVELPKYLNRALSVVAESALLPLLRNQHGRVDQPDMYSAFRFAQADMTPIKETTSGFLPSSLISENKFRDSKQSFVSEYPHQQRIANIDIRIKTQLKHNPMNLHTFANIKRIRTYLENKRKCMVIELNTESNHPVVRLQPIKRPIPLNIWTLIKGGEFRVIRGEMKEGSTVVKVRADGSGDFKTVTEAIASVPAGNTKRVVIWIGEGVYKEKLTIERNQPFITLYGSPKNMPKLTFDGDAKKYGTVYSGTLTVEADYFVAANLVLENTSPRPHAGKGGPALAARIRGNKAAVYNCKFIGFQDTLCDDDGLHVYKDCFIEGTVDFIFGKATALYLNSQLNVVGVGGLGVIAAHSREKEDDPSGYVFAHCSITGTGGPNTYLGRSWRPWSRVVFAYTTIADILHPEGWDDMNNPAFDKTVFFGEYKCSGPGAETSKRIKFSRQLSEAQAKPFINLDYVQAQKWLLPPPKL 940
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 8041521 8054475 - Cp4.1LG16g08470.1 Cpe16g00836 483211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe16g00836 940 Gene3D - 151 455 IPR012334 -
Cpe16g00836 940 Gene3D - 639 936 IPR012334 -
Cpe16g00836 940 PANTHER PECTINESTERASE 63-RELATED 641 935 - -
Cpe16g00836 940 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 152 444 - -
Cpe16g00836 940 ProSitePatterns Pectinesterase signature 2. 790 799 IPR033131 -
Cpe16g00836 940 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 641 935 - -
Cpe16g00836 940 ProSitePatterns Pectinesterase signature 2. 302 311 IPR033131 -
Cpe16g00836 940 SUPERFAMILY Pectin lyase-like 154 443 IPR011050 -
Cpe16g00836 940 PANTHER PECTINESTERASE 63-RELATED 152 444 - -
Cpe16g00836 940 SUPERFAMILY Pectin lyase-like 642 934 IPR011050 -
Cpe16g00836 940 Pfam Pectinesterase 644 929 IPR000070 GO:0030599|GO:0042545
Cpe16g00836 940 Pfam Pectinesterase 156 441 IPR000070 GO:0030599|GO:0042545
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe16g00836 Cpe-Chr16:8041521 Cpe16g00840 Cpe-Chr16:8058734 0 dispersed
Cpe16g00836 Cpe-Chr16:8041521 Cpe16g00838 Cpe-Chr16:8054835 4.91E-168 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe16g00836 K01051 - csv:101205095 463.381