Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe16g00842 ATGAAGGGTATATTAGAAAATGGACCAACAGAGTATATAGCTGGAAGCACAAGAGAAGAAGCCTGGCTTTGTTCACTGGACTACATATATCCCTCCTGCACACCCAAAATATCTCTCAGTGGTTCTAGTTCGCTTCCAATTCACGAATCCCTAGAAGAATTGATGGAACAGAGGAAGTACAGAGCCGATCTTCTTTCACCTGCCTTCCTTGTCCTCCTCCTTTTCCTCTTCCTTTCCGGTCGATCCGCCGTTCACGCCTACAAGAACTACACCGTCGGAGACTCCCTCGGCTGGTTCGACAAATTGGAGAAACCTGCCGTTGATTATCAAAAATGGACAGTCGGCAAGAACTTCAGCCTCGGCGATTTTCTAATTTTTAACACTGACAACAATCACTCGATTGTGCTTACGTATAATTTCACCACATACAAGCTATGCGACTACGACGACGCATCGGAACATGACACGACAGAATGGTCCGCTGCTGACCCGTCGGCGACCACTCCATACGCCGTGACGGTGGCCGTCCCACTGCTAAAAGAAGGGACCAACTATTTCTTCTCCGGCCACTACGACGGAGAGCAATGTCAAAATGGGCAACAATTCAAAATAAACGTCACTCATGGACAGGGCCTCCCGAAGAGCATGAGAGATTCTTCCGACGAAGCTCCGGCTCCTGTAGTTCCCGACACCGGCGACCAAACCGAATCTGCTCCCGACACCATTGTCCCTTCCAACTTCGACAATCCCCAAAACGACGTCGCTGATAGCGACAAGGAGGTTTCGGGCTCCGTTTCGCTATCGCTTCACTTCAAGTTTAATGAGTTTTTCTTCGTGTTAGTTGGTATTGCCTCTGCCTGCATTTTTCTCTGTACTGAATGA 882 48.75 MKGILENGPTEYIAGSTREEAWLCSLDYIYPSCTPKISLSGSSSLPIHESLEELMEQRKYRADLLSPAFLVLLLFLFLSGRSAVHAYKNYTVGDSLGWFDKLEKPAVDYQKWTVGKNFSLGDFLIFNTDNNHSIVLTYNFTTYKLCDYDDASEHDTTEWSAADPSATTPYAVTVAVPLLKEGTNYFFSGHYDGEQCQNGQQFKINVTHGQGLPKSMRDSSDEAPAPVVPDTGDQTESAPDTIVPSNFDNPQNDVADSDKEVSGSVSLSLHFKFNEFFFVLVGIASACIFLCTE 293
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 8072065 8074717 + Cp4.1LG16g08350.1 Cpe16g00842 483217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe16g00842 293 MobiDBLite consensus disorder prediction 234 257 - -
Cpe16g00842 293 CDD Phytocyanin 88 206 - -
Cpe16g00842 293 PANTHER BLUE COPPER PROTEIN 66 275 IPR039391 GO:0009055
Cpe16g00842 293 Gene3D - 87 211 IPR008972 -
Cpe16g00842 293 PANTHER BNAA08G26900D PROTEIN 66 275 - -
Cpe16g00842 293 SUPERFAMILY Cupredoxins 88 206 IPR008972 -
Cpe16g00842 293 Pfam Plastocyanin-like domain 98 200 IPR003245 GO:0009055
Cpe16g00842 293 MobiDBLite consensus disorder prediction 211 257 - -
Cpe16g00842 293 ProSiteProfiles Phytocyanin domain profile. 88 208 IPR003245 GO:0009055
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe05g00463 Cpe16g00842 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe12g00020 Cpe-Chr12:101142 Cpe16g00842 Cpe-Chr16:8072065 3.43E-36 dispersed
Cpe16g00842 Cpe-Chr16:8072065 Cpe17g00320 Cpe-Chr17:2169567 2.18E-30 dispersed
Cpe16g00842 Cpe-Chr16:8072065 Cpe05g00463 Cpe-Chr5:2699740 2.37E-148 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe16g00842 - - cpep:111776932 585.874