Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe16g00884 ATGGCCTCTCTGGCGCTGACTTCATCGTATCTCCCTTCTCTCCGGTCGCGCCTTCCGAAATCTGATTCGAATGCTCAAATTCGTTGCTCCTCTCTCCGTTCCAGCCTTCCCAAAGCCGCCATTTTCGGGAATGGCATCAGAACTAGCTTCCGCATTCCGTCTTCTCTATCAAGTGAAGCTAAATCCGTTAAACCAGCTCTAAATATCGGAAGCTCTCGTGGAAATCTCAGTGCTTTTACTGTCCGAGCGGCTTCTTCTTCTCCTTCTGCTGCTGTAGCTCCGGCTTCTCAGCCATGGCAAGGTGCGGCGATTAAGCCACTTATTGCTTCGATTGCTACGGGTATCATTTTGTGGTTTGTTCCGGTTCCGTCTGGTGTTTCTCGAAACGCGTGGCAATTGCTCGCGATTTTCCTCGCTACCATTGTTGGGATTATAACTCAGCCATTGCCTCTTGGTGCTGTTGCTTTGCTGGGACTAGGCGCCTCTGTTCTGACTAAAACCCTAACTTTCTCTGCTGCCTTCTCTGCGTTTGGTGATCCCATCCCATGGCTCATCGCTCTTGCCTTCTTCTTTGCTCGAGGTTTCATTAAGACCGGACTTGGTAATCGAATTGCTTATCAATTTGTTTCTCTATTCGGTAGTTCGTCGTTAGGGTTAGGGTACAGTTTAGTATTCAGTGAGGCCCTGTTGGCGCCGGCAATTCCCTCAGTGTCGGCCAGAGCAGGAGGGATATTCCTTCCACTGGTGAAATCTCTCTGTGTTGCTTGCGGTAGCAATGTTGGTGATGGTACGGAGAACCGGTTGGGATCGTGGTTGATGCTCACTTGCTTTCAAACTTCGGTGATTTCATCATCCATGTTCTTGACGGCTATGGCTGCTAATCCTCTGAGTGCGACTCTGACGTATAACACGATTAAGCAGACGATTGGATGGACCGACTGGGCTAAAGCAGCGATTGTTCCAGGATTGATCTCCTTGATTGTGGTGCCATTGCTTTTGTATGTGATCTATCCGCCCACGGTGAAAAGCAGTCCAGATGCACCAAAGCTTGCCAGAGAGAAGTTGGACAAGATGGGACCAATGTCCAAGAATGAGATCATAATGGCTGGAACTCTGCTTCTCACGGTGGGTCTTTGGGTTTTTGGAGGGGTTCTTAATGTGGACGCTGTTACTGCTGCCATCTTGGGATTGTCCGTCCTTCTTGTTACAGGCGTTGTGACATGGAAAGAGTGCTTGGGAGAAGCTGTTGCCTGGGACACTCTTACATGGTTTGCTGCACTCATTGCAATGGCAGGGTATCTCAACAAATATGGTCTCATCTCCTGGTTCAGCCAAACTGTAGTGAAGTTTGTTGGTGGACTTGGCCTTTCATGGCAGCTGTCGTTCGGCATTTTAGTTCTTCTCTATTTCTATTCCCACTACTTCTTTGCAAGTGGAGCTGCTCACATAGGCGCGATGTTTACCGCCTTCTTATCTGTTGCTAGTGCTTTGGGGACGCCCCCCTACTTTGGAGCAATAGTACTTTCCTTCTTATCTAACCTGATGGGTGGCCTAACCCACTACGGCATTGGCTCAGCGCCTGTCTTCTATGGTGCCAACTATGTTCCTCTTGCTCAATGGTGGGGCTACGGGTTCCTCGTATCTATTGTCAACATCATTATCTGGCTTGGCATTGGAGGAATGTGGTGGAAGGCCATCGGTTTATGGTGA 1710 49.12 MASLALTSSYLPSLRSRLPKSDSNAQIRCSSLRSSLPKAAIFGNGIRTSFRIPSSLSSEAKSVKPALNIGSSRGNLSAFTVRAASSSPSAAVAPASQPWQGAAIKPLIASIATGIILWFVPVPSGVSRNAWQLLAIFLATIVGIITQPLPLGAVALLGLGASVLTKTLTFSAAFSAFGDPIPWLIALAFFFARGFIKTGLGNRIAYQFVSLFGSSSLGLGYSLVFSEALLAPAIPSVSARAGGIFLPLVKSLCVACGSNVGDGTENRLGSWLMLTCFQTSVISSSMFLTAMAANPLSATLTYNTIKQTIGWTDWAKAAIVPGLISLIVVPLLLYVIYPPTVKSSPDAPKLAREKLDKMGPMSKNEIIMAGTLLLTVGLWVFGGVLNVDAVTAAILGLSVLLVTGVVTWKECLGEAVAWDTLTWFAALIAMAGYLNKYGLISWFSQTVVKFVGGLGLSWQLSFGILVLLYFYSHYFFASGAAHIGAMFTAFLSVASALGTPPYFGAIVLSFLSNLMGGLTHYGIGSAPVFYGANYVPLAQWWGYGFLVSIVNIIIWLGIGGMWWKAIGLW 569
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 8330624 8335244 - Cp4.1LG16g08900.1 Cpe16g00884 483259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe16g00884 569 PANTHER DICARBOXYLATE TRANSPORTER 2.1, CHLOROPLASTIC 76 569 IPR030676 -
Cpe16g00884 569 PANTHER DICARBOXYLATE TRANSPORTER 1, CHLOROPLASTIC 76 569 - -
Cpe16g00884 569 TIGRFAM dass: transporter, divalent anion:Na+ symporter (DASS) family 121 563 IPR001898 GO:0016020|GO:0022857|GO:0055085
Cpe16g00884 569 Pfam Sodium:sulfate symporter transmembrane region 106 569 IPR001898 GO:0016020|GO:0022857|GO:0055085
Cpe16g00884 569 CDD ArsB_NhaD_permease 141 563 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe05g00498 Cpe16g00884 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe14g00202 Cpe-Chr14:1139196 Cpe16g00884 Cpe-Chr16:8330624 1.07E-157 dispersed
Cpe16g00884 Cpe-Chr16:8330624 Cpe05g00498 Cpe-Chr5:2934413 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe16g00884 - - bhj:120088316 1004.59