Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe16g00891 ATGGATTTGGATCACCCATCCGCGCCAGACCTCGATCTTCACAGTCTCGGGGCCCTCAGGGTACTCGGAAAAGGAGCCATGGGGACCGTCTTCCTCGTCCACCACCGCCTTGCCGATGACCCTGCTCATTTCCCCTTTGCTCTCAAGGTCGTCGACAAATCCTCTTTTGTCTCCAAGCTCGACGCGGAGCGCCGAGCCCGTTGGGAGATTCAGGTTCTTTCTCGTTTGTCCTTCCCTAAACCCCACCCCTTCCTCCCCCACATTATCGGTTCCTTCGAGTCCGACGAATTTTTGGGCTGGGCCCTTCCCTACTGTTCTGGCGGCGACCTTAACGTCTTGCGTCACCGTCAAATGGACCGGGTTTTCTCGCCCGCCGTCATCAGGTTCTATTTGGCCGAGATAGTCTGTGCGCTCGACCACCTCCATAGCCTGGGCATCGTCTACCGAGATTTGAAGCCGGAGAATGTATTGATTCAACAATCGGGTCACGTTACCCTCACGGACTTTGATTTGTCGCGTAATTTGACTCGCAGAACAGTAAATGACGTCGTCTCGCTTGATAACTCCGGCCACGAGAAGCCGACGGTGGTCGTCCGGCAAAAAAACCGGCGGAAATTGACGCGATGGTTCATGGCGACCTCCATTGCTAGAGACGGGTCAAGGAAGGCTAAATTGGCTCGGGTTAGCCCTGTGAGCCGTCGGAAGCCGAGTTTCTCCAACGGCGAGCGGTCGAACTCGTTTGTCGGAACAGAGGAGTATATTTCGCCGGAGGTCGTTCGAGGCGAGGGACATGAATTCGCCGTCGACTGGTGGGCCCTGGGGATTCTCACGTACGAGATGCTCTACGGGACGACGCCGTTTAAGGGGAAGAACCGGAAAGAGACGTTTGGAAACGTTCTGTTGAAAGCTCCGGAGTTGATCGGAAAGCGTTCGGATTTAACGGATTTAATCGAACGGTTGCTAGTGAAGGACCCCACCAGGCGGTTAGGGTACGTACGCGGCGCATGTGAGATCAAAGAGCATGCGTTTTTTAACGGCGTTAAGTGGGACCTATTAACGGAGGTCATGCGTCCGCCATTTTTACCCCCTGACGAAGAAACGGAGTTGACGAAGAATCCAGCGCTCGGTGGTGTGGGTATAACGGAATACTTCCATAGACAGAGATCCCCGGCTTCGTTTCCACCATCGGCGTCGTCAACTCCGTCGACCTCCTTCAGTTGGGAGAATAACAACAACAAGTGTTTGACGGAGTTCTGA 1257 54.57 MDLDHPSAPDLDLHSLGALRVLGKGAMGTVFLVHHRLADDPAHFPFALKVVDKSSFVSKLDAERRARWEIQVLSRLSFPKPHPFLPHIIGSFESDEFLGWALPYCSGGDLNVLRHRQMDRVFSPAVIRFYLAEIVCALDHLHSLGIVYRDLKPENVLIQQSGHVTLTDFDLSRNLTRRTVNDVVSLDNSGHEKPTVVVRQKNRRKLTRWFMATSIARDGSRKAKLARVSPVSRRKPSFSNGERSNSFVGTEEYISPEVVRGEGHEFAVDWWALGILTYEMLYGTTPFKGKNRKETFGNVLLKAPELIGKRSDLTDLIERLLVKDPTRRLGYVRGACEIKEHAFFNGVKWDLLTEVMRPPFLPPDEETELTKNPALGGVGITEYFHRQRSPASFPPSASSTPSTSFSWENNNNKCLTEF 418
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 8376300 8377556 + Cp4.1LG16g08780.1 Cpe16g00891 483266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe16g00891 418 Pfam Protein kinase domain 239 344 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe16g00891 418 Pfam Protein kinase domain 20 212 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe16g00891 418 ProSiteProfiles Protein kinase domain profile. 16 344 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe16g00891 418 Gene3D Phosphorylase Kinase; domain 1 18 104 - -
Cpe16g00891 418 Gene3D Transferase(Phosphotransferase) domain 1 240 363 - -
Cpe16g00891 418 SUPERFAMILY Protein kinase-like (PK-like) 19 407 IPR011009 -
Cpe16g00891 418 SMART serkin_6 16 344 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe16g00891 418 Gene3D Transferase(Phosphotransferase) domain 1 105 178 - -
Cpe16g00891 418 PANTHER FLIPPASE KINASE 1-RELATED 11 390 - -
Cpe16g00891 418 ProSitePatterns Serine/Threonine protein kinases active-site signature. 146 158 IPR008271 GO:0004672|GO:0006468
Cpe16g00891 418 PANTHER SERINE/THREONINE-PROTEIN KINASE UCNL 11 390 - -
Cpe16g00891 418 ProSitePatterns Protein kinases ATP-binding region signature. 22 49 IPR017441 GO:0005524
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe05g00507 Cpe16g00891 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe16g00891 Cpe-Chr16:8376300 Cpe10g01151 Cpe-Chr10:8351951 9.47E-77 dispersed
Cpe17g01122 Cpe-Chr17:8500899 Cpe16g00891 Cpe-Chr16:8376300 5.35E-98 transposed
Cpe16g00891 Cpe-Chr16:8376300 Cpe05g00507 Cpe-Chr5:3007967 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
62922 PF00069 Pkinase 3.70E-31 CL0016 Cpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe16g00891 - K08286 csv:101207338 680.248