Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cpe16g00933 | ATGGCTGTAACAGCCCCAGGGCAGCTCAACGTTAACGAGCCCCCTTCGTGGGGATCTAGAAGTGTCGATTGCTTTGAAAAACTGGAGCAGATTGGTGAAGGCACTTATGGTCAAGTTTACATGGCCAGAGAATTAAAAACAGGTGAAATTGTTGCGCTGAAAAAAATACGGATGGATAATGAGAGGGAGGGGTTCCCTATTACTGCCATTCGAGAAATCAAAATTCTGAAGAAACTCCATCATGAAAATGTAATCAAGTTGAAAGAAATTGTGACATCTCCAGGTCCTGAGAAGGATGAACAAGGGAAGCCAGGCATGTTCTCTATCTTCATTTGCAGCATTAGGCTTCAATACCATACAACTGTCATTTTCATTTTAGTAGAATTTAGTTGCATCAATGGTAACAAGTACAAAGGTGGTATCTACATGGTTTTCGAGTACATGGATCATGATTTGACAGGTCTTGCTGATCGTCCGGGGATGAGATTTTCAGTTCCCCAAATCAAGTGTTACATGAGGCAGCTTCTCACCGGGCTTCACTATTGTCATGTAAATCAAGTACTGCATAGAGATATAAAAGGCTCAAATCTGCTTATTGACAATGAAGGAAATTTGAAGCTTGCAGATTTTGGGCTTGCCCGTTCATTTTCTAACGATCACAATGCAAATCTAACAAATCGTGTCATTACCTTATGGTACAGACCTCCTGAATTGCTCCTTGGGTCGACCAAATATGGTCCAGCTGTAGATATGTGGTCTGTTGGTTGTATATTTGCAGAGCTTCTGCATGGGAAGCCAATATTCCCTGGGAAGGATGAGCCGGAGCAATTAAATAAGATCTTTGAGCTATGTGGTGCTCCAGATGAAGTCAATTGGCCCGGGGTTTCTAAAATCCCTTGGTACAACAATTTTAAGCCCACAAGACCAATGAAGAGACGTATTAGAGAAGTTTTCAGGCACTTTGATCGTCATGCTTTAGAACTGTTAGAGAAGATGATTACTCTCGATCCTTCTCAGAGGATATCTGCCAAGGATGCCCTGGATGCGGAGTACTTTTGGACGGATCCATTACCCTGTGACCCCAAGAGTTTGCCAAAGTATGAATCATCACACGAGTTCCAGACAAAGAAGAAGCGGCAACAGCAACGACAACATGAAGAAAATGCAAAGCGACAGAAGTTGCAACACCCACAGCATGCACGCCTTCCACCTATTCAGCAGTCTGGGCAAGCACATGCACACATGCGACCGGTACCCAACCAACCAATTCACGGGTCTCAACCACCAGTTGCTGCAGGACCTAGCCATCATTTTGGAAAGCCTCGTGGACCCCCAGGTCCTGGTAGGTATCCTGGTGGAAATCCCCCTTCTGGATACAACCATTCAAGTCGTGGTGGTCAAGGTGGTTATGGTAACAATCAATATGGTCAAGGACGAGGCGCTGCACCCTATGGGTCCGGTAACATGTCAGGTGCTGGTCCTCGAGGTGGAGCTGGAGGTGGCAGTAGTTATGGCATGGGAGCTCCAAATTACCCACAGAATGGTCCATATCCTGGTAGTTCTGGCACTGGCCGTGGCTCCAATGTGATGGGTGGAAACCGGAACCAACAATACGGGTGGCAACAGTAA | 1629 | 45.73 | MAVTAPGQLNVNEPPSWGSRSVDCFEKLEQIGEGTYGQVYMARELKTGEIVALKKIRMDNEREGFPITAIREIKILKKLHHENVIKLKEIVTSPGPEKDEQGKPGMFSIFICSIRLQYHTTVIFILVEFSCINGNKYKGGIYMVFEYMDHDLTGLADRPGMRFSVPQIKCYMRQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSNDHNANLTNRVITLWYRPPELLLGSTKYGPAVDMWSVGCIFAELLHGKPIFPGKDEPEQLNKIFELCGAPDEVNWPGVSKIPWYNNFKPTRPMKRRIREVFRHFDRHALELLEKMITLDPSQRISAKDALDAEYFWTDPLPCDPKSLPKYESSHEFQTKKKRQQQRQHEENAKRQKLQHPQHARLPPIQQSGQAHAHMRPVPNQPIHGSQPPVAAGPSHHFGKPRGPPGPGRYPGGNPPSGYNHSSRGGQGGYGNNQYGQGRGAAPYGSGNMSGAGPRGGAGGGSSYGMGAPNYPQNGPYPGSSGTGRGSNVMGGNRNQQYGWQQ | 542 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
16 | 8608624 | 8614926 | - | Cp4.1LG16g09420.1 | Cpe16g00933 | 483308 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cpe16g00933 | 542 | Pfam | Protein kinase domain | 25 | 352 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cpe16g00933 | 542 | Gene3D | Phosphorylase Kinase; domain 1 | 14 | 149 | - | - | |
Cpe16g00933 | 542 | MobiDBLite | consensus disorder prediction | 514 | 542 | - | - | |
Cpe16g00933 | 542 | ProSitePatterns | Protein kinases ATP-binding region signature. | 31 | 54 | IPR017441 | GO:0005524 | |
Cpe16g00933 | 542 | MobiDBLite | consensus disorder prediction | 363 | 542 | - | - | |
Cpe16g00933 | 542 | SMART | serkin_6 | 25 | 352 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cpe16g00933 | 542 | MobiDBLite | consensus disorder prediction | 456 | 474 | - | - | |
Cpe16g00933 | 542 | MobiDBLite | consensus disorder prediction | 365 | 394 | - | - | |
Cpe16g00933 | 542 | PANTHER | CYCLIN-DEPENDENT KINASE C-2 | 6 | 477 | - | - | |
Cpe16g00933 | 542 | Gene3D | Transferase(Phosphotransferase) domain 1 | 150 | 392 | - | - | |
Cpe16g00933 | 542 | PANTHER | CELL DIVISION PROTEIN KINASE | 6 | 477 | - | - | |
Cpe16g00933 | 542 | SUPERFAMILY | Protein kinase-like (PK-like) | 19 | 360 | IPR011009 | - | |
Cpe16g00933 | 542 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 187 | 199 | IPR008271 | GO:0004672|GO:0006468 | |
Cpe16g00933 | 542 | CDD | STKc_CDK9_like | 25 | 352 | - | - | |
Cpe16g00933 | 542 | ProSiteProfiles | Protein kinase domain profile. | 25 | 352 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cpe01g01604 | Cpe-Chr1:9789478 | Cpe16g00933 | Cpe-Chr16:8608624 | 9.81E-88 | dispersed | |
Cpe01g02197 | Cpe-Chr1:18687701 | Cpe16g00933 | Cpe-Chr16:8608624 | 0 | dispersed | |
Cpe09g00576 | Cpe-Chr9:3977814 | Cpe16g00933 | Cpe-Chr16:8608624 | 7.27E-88 | dispersed | |
Cpe11g00061 | Cpe-Chr11:324146 | Cpe16g00933 | Cpe-Chr16:8608624 | 3.10E-88 | dispersed | |
Cpe16g00933 | Cpe-Chr16:8608624 | Cpe20g00292 | Cpe-Chr20:1630422 | 8.37E-116 | dispersed | |
Cpe16g00933 | Cpe-Chr16:8608624 | Cpe02g01011 | Cpe-Chr2:9322587 | 7.19E-117 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
62924 | PF00069 | Pkinase | 2.30E-72 | CL0016 | Cpe | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cpe16g00933 | K08819 | - | csv:101220936 | 945.266 |