Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe16g00938 ATGGCGACGAGCTTCGTCCACTCTCACAGACCCGAGTTTCTCACCGTCGCCGTCGCTGCGGTTGCCATCGGCGTCGCTACTGCCTACTATTTCTATATCACCAAGAAATCTAAACCCCAAGGTTGCTTGGACCCTGATAACTTAAAAGAATTTAAGCTAGTTAAACGCACACAGCTTAGCCATAATGTAGCGAAGTTCAGATTCTCTCTTCCGACGCCAACCTCAATCTTGGGGCTGCCGATTGGGCAGCATATGAGTTGCAGAGGAAAAGATAGCGAAGGTGAAGAAGTTGTGAAACCGTACACTCCAACCAGTTTGGATACAGATGTTGGATACTTTGATTTGGTCATAAAGATGTATCCTCAAGGAAGGATGTCCCACCACTTTCGTGAGATGCGTGAAGGTGATTTCTTGGCGGTGAAAGGTCCTAAGGGACGTTTCAAGTATGAAGCTAATGAAGTGGAGGCCTTTGGGATGCTTGCTGGAGGCACAGGCATAACTCCTATGTTCCAGGTTGCACGAGCAATACTAGAAAACCCAGTTGATCACACCAATGTGCATCTTATATATGCTAATGCTACTTGTGAAGACATTCTTCTAAAGGAAGAATTGGATAGTCTTGCGTCTAGCCTCCCGAAGGATGGGATGGCGGGCGTTGGCTTTGTGACTGAGGAAATGATACGACTACACTGTCCTGGACCATCCCCTAATGTTCGGATATTGAGGTGCGGACCACCCCCCATGAACAAAGCTATGGCTGCTTACCTCAAAACTATTGGCTATACTTCCCAAATGCAGTTCCAGTTCTAA 810 47.04 MATSFVHSHRPEFLTVAVAAVAIGVATAYYFYITKKSKPQGCLDPDNLKEFKLVKRTQLSHNVAKFRFSLPTPTSILGLPIGQHMSCRGKDSEGEEVVKPYTPTSLDTDVGYFDLVIKMYPQGRMSHHFREMREGDFLAVKGPKGRFKYEANEVEAFGMLAGGTGITPMFQVARAILENPVDHTNVHLIYANATCEDILLKEELDSLASSLPKDGMAGVGFVTEEMIRLHCPGPSPNVRILRCGPPPMNKAMAAYLKTIGYTSQMQFQF 269
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 8657691 8662600 - Cp4.1LG16g09410.1 Cpe16g00938 483313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe16g00938 269 Gene3D Translation factors 41 139 - -
Cpe16g00938 269 Pfam Oxidoreductase NAD-binding domain 159 252 IPR001433 GO:0016491
Cpe16g00938 269 SUPERFAMILY Riboflavin synthase domain-like 42 150 IPR017938 -
Cpe16g00938 269 PANTHER NADH-CYTOCHROME B5 REDUCTASE 6 269 IPR001834 GO:0016491
Cpe16g00938 269 PRINTS Cytochrome B5 reductase signature 77 88 - -
Cpe16g00938 269 PRINTS Cytochrome B5 reductase signature 135 149 - -
Cpe16g00938 269 PRINTS Cytochrome B5 reductase signature 99 106 - -
Cpe16g00938 269 PRINTS Cytochrome B5 reductase signature 196 207 - -
Cpe16g00938 269 PRINTS Cytochrome B5 reductase signature 158 177 - -
Cpe16g00938 269 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 46 150 IPR017927 GO:0016491
Cpe16g00938 269 PANTHER NADH-CYTOCHROME B5 REDUCTASE 6 269 - -
Cpe16g00938 269 Pfam Oxidoreductase FAD-binding domain 51 149 IPR008333 -
Cpe16g00938 269 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 158 177 IPR001709 GO:0016491
Cpe16g00938 269 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 196 207 IPR001709 GO:0016491
Cpe16g00938 269 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 138 263 IPR039261 -
Cpe16g00938 269 CDD cyt_b5_reduct_like 51 269 - -
Cpe16g00938 269 Gene3D - 140 268 IPR039261 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe10g01086 Cpe-Chr10:6608643 Cpe16g00938 Cpe-Chr16:8657691 7.02E-123 dispersed
Cpe16g00938 Cpe-Chr16:8657691 Cpe13g00590 Cpe-Chr13:5782089 2.05E-24 dispersed
Cpe16g00938 Cpe-Chr16:8657691 Cpe19g00231 Cpe-Chr19:1918564 9.68E-132 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe16g00938 K00326 - csv:101219272 457.988