Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe17g00040 ATGGGATCGGAGCAGTTGATGGCCGGAGGTGGGCCTCGATATGTTCAAATGCAATCGGAGCAGCCTACAGCTTCGATGTCGTCGTTTTTCTCGTTTCATCATGACGCTCCTGAGCCAACGAGGATTTTCGATGAATTGCCGAAGGCCTCAATTATTTCCGTTTCTCGCCCGGATGCCGGCGATATCAGTCCGATGCTTCTTTCTTACACAATCGAATGCCAGTACAAGCAGGTTAAAGAATGGCTTCAAAATCTAGGAATAGGAGAACACACGACAGTGATCCAAGATGAGGATGGACCAGATGATGAAGCCAATCCTCTGCATCATGATGAAAGTTCTAAAAATAGGGATGTTCCGTCCAGTGCTGCCCTGCCTATCATTCGGCCTGCCTTAGGAAGGCAGCATTCTATGTCTGATAGAGCTAAGACTGCAATGCAAGGGTACCTGAATCACTTCTTGAGTAACATGGATATCGTCAACTCTCGAGAGGTTTGCAGGTTTTTGGAGGTCTCTAAGTTATCATTTTCACCAGAATACGGCCCAAAGTTGAAAGAGGATTATGTTATGGTGAAGCATCTACCTAAAATTGCACGGGAAGATGACGCTAGGAAATGCTGCCTATGCCGGTGTTTTGGTTGTTGTAATGACAATTGGCAAAAGGTGTGGGCTGTATTAAAACCTGGTTTTTTGGCCTTGTTGGGAGATCCTTTTGACACTCAACCAATGGATATAATAGTTTTTGATGTGCTACCTACTTCTGATGCCAATGGAGATGGACGAGTATCTTTGGCAAAGGAAATTAAGGAGCGAAATCCATTACGACATTCATTTAAGGTGACATGTGGAAATAGGAGTATTAGGATAAGAGCAAAGAACGGATCCAAGGTTAAAGACTGGGTTGCTGCAATTAATGATGCGGGACTGAGGCCTCCTGAGGGATGGTGTCATCCTCACCGTTTTGGTTCGTTTGCTCCTCCAAGGGGTTTGACAGACGATGGTAGTAAGGCTCAGTGGTTCATCGATGGTCAAGCAGCTTTTGAAGCTATTGCCTTTTCCATTGAACGTGCAAAATCGGAGATTTTCATTTGCGGCTGGTGGCTTTGTCCAGAATTATATCTGCGGCGTCCTTTTATTTCAAATGCTTCATCTAGGCTCGATGCTTTGCTTGAAGCAAAAGCTAAGGAAGGGGTTCAGATATACATTCTTCTCTACAAAGAGGTTGCCCTTGCTTTAAAGATTAATAGTGTTTATAGCAAGAGAAAACTTCTAGGCATCCATGAGAATGTGAGAGTATTACGCTACCCTGACCACTTCTCCAGTGGTGTGTACTTATGGTCCCACCATGAAAAACTTGTCATTGTCGATTATCATATTTGCTTTATTGGAGGACTGGATTTATGCTTTGGTCGTTATGATACACCAGAACATAAAGTTGGTGATCGTCCTCCTTCAGTATGGCCCGGGAAGGACTACTATAATCCAAGGGAATCCGAGCCAAATTCATGGGAAGATACCATGAAAGATGAGTTGGATCGCGGTAAATATCCTCGCATGCCTTGGCATGATGTCCACTGTGCACTTTGGGGACCACCTTGTCGAGACTTAGCTAGACATTTTGTCCAACGCTGGAATTATGCTAAGAGAAACAAAGCCCCAAATGAGCAGGCAATTCCATTACTTATGCCTCAGCATCATATGGTCATTCCTCATTACTTGTGGAATACCCGAGAATTGGAGGTTGAAAGGAAGAGTTTTGACAATTCTCAAGAATCAACAGTACAGGATTCATTTTCTCGCGGATCATCTTTTCACGATATTCCTTTGCTTTTACCTCAAGAGGCTGATGGACAGGATTCTCAAAATGAAGGTCCAAAATCAAATGGACTGGAACCCATTGCTACTCCCCTCGATCAGCCTAGTAAGATCAGCAGCGGTCTCTCGTTCTCTTTTAGGAAGATCAAAGTTGAACCCTTAGGACCAGATATGCCTCTGAAAGGCTTTGTTGATGATCTCGACCATTTGGATTCCCATGGAAAGTTGTCTGGAGATGGGAAAACACATCATCGTGTCAAAAGCTCAGAGTTGGAGTGGTGGGAAACACAAGACAGGGGACATGGTGGCTTTGCAGATGAATCCGGACAAGTTGGTCCGTGTGCTTCATGTCGTTGCCAGGTCATCAGAAGTGTCAGTCAATGGTCTGCTGGGACGAGCCAAACTGAAGAGAGCATTCACATTGCATACTGCTCTCTTATAGAGAAAGCAGAACATTTTGTCTATATTGAGAATCAATTTTTTATATCAGGCCTCTCAGGAGATGATTCAATACGGAATCGTGTGTTAGAAGCATTATACCGTCGCATAATGAGAGCCTACCGTGAAAAGAAAACTTTTAGGGTCATTATTGTAATTCCACTCTTGCCTGGATTTCAGGGAGGACTGGATGACAGTGGTGCAGCATCGGTTAGAGCAATAATGCATTGGCAGTATCGAACTATATGTCGAGGACAAAATTCGATATTCCATAATCTCTATGATCTTCTTGGTTCAAAAGTTCATGATTATATATCATTCTATGGCCTCAGATCTTATGGTAAACTCTTTGATGGTGGTCCTGTGGCTACAAGCCAGGTGTACGTGCATAGTAAAATTATGATCGTAGACGATTGTATTGCTTTGATTGGATCGGCTAACATCAACGACAGGAGTTTACTCGGTTCTAGGGATTCTGAGATTGCTATTGTGATTGAAGATAAGGAACTTATCAATTCATATATGGGAGGACAACCATGGAAAGCGGGAAAGTTTTGTTGGAGTCTTCGCCTCTCTCTTTGGTCTGAACATCTTGGTCTTCGTCCGGGACAGATCAATCAAATAGTTGACCCAGTTTCTGACTCAACCTACAAGGATACATGGATGGGAACTGCTAAGACGAACACGACAATATACCAAGATGTATTTTCTTGCCTACCCAACGACCTCATAAATTCCAGAGCTGGACTGAGGCAAAGTGTGGCTTTCTGGAAAGAGAGGTTGGGGCACACCACAATAGATTTAGGAATTGCACCGGAGAGGCTGGAGTTTTACAAGAATGGAGAAATTGAAAGGATTGATCCGATGGAGAGATTAAGTTCAGTGAAGGGACATCTTGTCTCCTTCCCATTGGAATTCCTGAGCAAAGAAGACTTAAGACCTGTGTTCAATGAGAGTGAGTACTATGCATCTCAAGTTTTTCATTAA 3237 43.47 MGSEQLMAGGGPRYVQMQSEQPTASMSSFFSFHHDAPEPTRIFDELPKASIISVSRPDAGDISPMLLSYTIECQYKQVKEWLQNLGIGEHTTVIQDEDGPDDEANPLHHDESSKNRDVPSSAALPIIRPALGRQHSMSDRAKTAMQGYLNHFLSNMDIVNSREVCRFLEVSKLSFSPEYGPKLKEDYVMVKHLPKIAREDDARKCCLCRCFGCCNDNWQKVWAVLKPGFLALLGDPFDTQPMDIIVFDVLPTSDANGDGRVSLAKEIKERNPLRHSFKVTCGNRSIRIRAKNGSKVKDWVAAINDAGLRPPEGWCHPHRFGSFAPPRGLTDDGSKAQWFIDGQAAFEAIAFSIERAKSEIFICGWWLCPELYLRRPFISNASSRLDALLEAKAKEGVQIYILLYKEVALALKINSVYSKRKLLGIHENVRVLRYPDHFSSGVYLWSHHEKLVIVDYHICFIGGLDLCFGRYDTPEHKVGDRPPSVWPGKDYYNPRESEPNSWEDTMKDELDRGKYPRMPWHDVHCALWGPPCRDLARHFVQRWNYAKRNKAPNEQAIPLLMPQHHMVIPHYLWNTRELEVERKSFDNSQESTVQDSFSRGSSFHDIPLLLPQEADGQDSQNEGPKSNGLEPIATPLDQPSKISSGLSFSFRKIKVEPLGPDMPLKGFVDDLDHLDSHGKLSGDGKTHHRVKSSELEWWETQDRGHGGFADESGQVGPCASCRCQVIRSVSQWSAGTSQTEESIHIAYCSLIEKAEHFVYIENQFFISGLSGDDSIRNRVLEALYRRIMRAYREKKTFRVIIVIPLLPGFQGGLDDSGAASVRAIMHWQYRTICRGQNSIFHNLYDLLGSKVHDYISFYGLRSYGKLFDGGPVATSQVYVHSKIMIVDDCIALIGSANINDRSLLGSRDSEIAIVIEDKELINSYMGGQPWKAGKFCWSLRLSLWSEHLGLRPGQINQIVDPVSDSTYKDTWMGTAKTNTTIYQDVFSCLPNDLINSRAGLRQSVAFWKERLGHTTIDLGIAPERLEFYKNGEIERIDPMERLSSVKGHLVSFPLEFLSKEDLRPVFNESEYYASQVFH 1078
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
17 254675 264594 + Cp4.1LG17g00520.1 Cpe17g00040 483358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe17g00040 1078 MobiDBLite consensus disorder prediction 94 116 - -
Cpe17g00040 1078 PIRSF PLD_euk 651 1078 IPR016555 GO:0004630|GO:0006654|GO:0048017
Cpe17g00040 1078 PIRSF PLD_euk 61 599 IPR016555 GO:0004630|GO:0006654|GO:0048017
Cpe17g00040 1078 CDD PH_PLD 159 306 - -
Cpe17g00040 1078 Gene3D Endonuclease Chain A 329 589 - -
Cpe17g00040 1078 Gene3D - 208 306 IPR011993 -
Cpe17g00040 1078 SMART PH_update 182 310 IPR001849 -
Cpe17g00040 1078 PANTHER PHOSPHOLIPASE D 77 1075 IPR015679 -
Cpe17g00040 1078 PANTHER PHOSPHOLIPASE D 31 82 IPR015679 -
Cpe17g00040 1078 Pfam Phospholipase D Active site motif 443 470 IPR001736 GO:0003824
Cpe17g00040 1078 PANTHER PHOSPHOLIPASE 77 1075 - -
Cpe17g00040 1078 PANTHER PHOSPHOLIPASE 31 82 - -
Cpe17g00040 1078 Pfam PLD-like domain 748 923 IPR025202 -
Cpe17g00040 1078 SUPERFAMILY Phospholipase D/nuclease 288 562 - -
Cpe17g00040 1078 SUPERFAMILY Phospholipase D/nuclease 715 924 - -
Cpe17g00040 1078 CDD PLDc_vPLD1_2_yPLD_like_2 735 919 - -
Cpe17g00040 1078 Gene3D Endonuclease Chain A 699 932 - -
Cpe17g00040 1078 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 443 470 IPR001736 GO:0003824
Cpe17g00040 1078 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 875 902 IPR001736 GO:0003824
Cpe17g00040 1078 SUPERFAMILY PH domain-like 215 306 - -
Cpe17g00040 1078 CDD PLDc_vPLD1_2_yPLD_like_1 336 480 - -
Cpe17g00040 1078 ProSiteProfiles PH domain profile. 217 308 IPR001849 -
Cpe17g00040 1078 SMART pld_4 875 902 IPR001736 GO:0003824
Cpe17g00040 1078 SMART pld_4 443 470 IPR001736 GO:0003824
Cpe17g00040 1078 MobiDBLite consensus disorder prediction 613 638 - -
Cpe17g00040 1078 MobiDBLite consensus disorder prediction 93 119 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe12g00294 Cpe17g00040 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe17g00040 Cpe-Chr17:254675 Cpe02g01720 Cpe-Chr2:14089946 1.27E-15 dispersed
Cpe11g00895 Cpe-Chr11:7223172 Cpe17g00040 Cpe-Chr17:254675 0 wgd
Cpe12g00294 Cpe-Chr12:1945418 Cpe17g00040 Cpe-Chr17:254675 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe17g00040 K01115 - csv:101211856 2061.19