Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe17g00047 ATGGATCTAAGCCACATGAAGGGATCGATACCGACGCCGACTTCAATTTCAGATAGAAAAGCCACTGAAATGGTTTCTGATCAGTTCCCGGCGGGTCTTCGCGTCCTGGTTGTGGATGATGATCCTACCTGTCTCAGGATCTTGGAAAAGATGCTTCAGAATTGCTGCTATGCTGTGACGAAATGTAATCGGGCTGAGATCGCATTATCCATGCTTCGTGAGAACAAAAACGGGTTTGATATTGTGTTAAGTGACGTGCATATGCCAGACATGGATGGATTCAAACTTCTTGAGCAAGTTGGGTTGGAGATGGATTTGCCCGTTATCAGTGAACTAATATTGGAGACATGTGATTGTACAGTGATGTCAGCTGATGATGGGAAGAATGTTGTGATGAAGGGAGTCATTCATGGTGCTTGTGATTACCTGATCAAACCTGTTCGAATTGAAGCGCTCAGGAACATATGGCAACATGTAGTTCGGAAGCGAAAGACTGAATGGAAGGATTTAGAGCAATCTGGGAGCGTGGACGAGGGCGATCGAGAGAAAAATCCATCTGAAGGTGCTAACTATTCATCTTCAGTATATGAAGGAAGTTGGAACAGCTCGAAGAGGAGGAGGGATACAGAAGAAGAGGCCGAGGAGAGGGACGATACGTCGACTTTAAAGAAGCCTAGGGTGGTATGGTCGGTTGAGCTCCATCAACAGTTTGTCGCTGCAGTTAAACAGCTAGGCATCGACAAGGCTGTTCCTAAAAAGATATTGGAGTTGATGAACGTTCCGGGGCTTACTCGAGAAAATGTTGCCAGTCACCTCCAGAAATATCGGTTATATCTTAGAAGGCTTAGTGGAGTATCATCGTCACACTCACTCCAATGTAATTTGAACAATTCTTTTATGAACCCTCAAGATCCACCTTTTGGGCCAATGGCTTCATTCAATGGAATTGATCTTCAGACACTTTCGGTCACTGGCCATCTCTCGCCTCAAAGCCTTGCTGCACTCCAAGCAACCGAATTTCGAAGGCCTGCTACAGCGAAATCTAGCATGTCGATGGCCCTTGTTGATCAGAACAACCTATTCAGCTTTGAAAATCCAAAATTGAGGTTTGTTGATGACCAAACGCCACACCTAAACAACAGTAAACCAATAAACTTGTTTCATGGGATTCCAACAAAAATGGAGCCAAAGCAGCTTGCCATTATGCACCCTTCTGTCCAGACTCAAGGGAACATAAACATGCCACTCAATATCAAGACAGAACATGGTGGAACTCAACTAATGCATCATTTGTCCCATCAGCAAACTGGAGGACAGGCTCTAAGTAACTCTCCTGCTAGCCACTTACCCAGAATTTCATCGTCGTTTCCGATCATATCAGGTAGCATTACGAGTCGAAATGGGACTGCTGATAGTACCCAAGGACCTGGATATAACCTAGTTTCGCCAGCATCCTTGATGATGAACTTTCCAATGAACCAACTCACAGAATTGTCGAACAATTTTTCTCTTCCGAGTGATTCGACGGTATCTACCTTAACCTGTAAAGGGGTGTTTCAAGAAGAGATTAGTTCAGATCTACACGGGTCGGATGGACTAATGTCGAGTTATGATGTTTTTAATGACTTGCATCTGCAGAAATCCCATGACTGGGATTCTCAGAATGTAGGCAGCTTTGCCTTTGGTACTTCTCACCATGGGAACTTCATACAGGATAGCTTTGATGTCTCACCTTCAACTTTGATTCATCATGGTTTTCCTCCAAGCCAAACAAATGGACAAAATCATAATTCATCCTCTTCTGGAAAGACTATCTTTCCCTTTTCGGATGCAACTCAACCCGAGAATGCGCAGAGTAATGCCGAGAAGTTGCCTCTCGATCCCGGGGACGTCAAACCTCAGAGAATCCCTGATGCAAGCTATCAAACCGACCTCTTACCTGAGAACTTTGGCCAGGATGAACTTCTCAGTGTCTTCCTCAAACAAGAACAACAAGGAGACAACGGATCGGTCGACTTTAGCGGTTACCAAACGGAAAATATTTGCGTTTAG 2052 44.54 MDLSHMKGSIPTPTSISDRKATEMVSDQFPAGLRVLVVDDDPTCLRILEKMLQNCCYAVTKCNRAEIALSMLRENKNGFDIVLSDVHMPDMDGFKLLEQVGLEMDLPVISELILETCDCTVMSADDGKNVVMKGVIHGACDYLIKPVRIEALRNIWQHVVRKRKTEWKDLEQSGSVDEGDREKNPSEGANYSSSVYEGSWNSSKRRRDTEEEAEERDDTSTLKKPRVVWSVELHQQFVAAVKQLGIDKAVPKKILELMNVPGLTRENVASHLQKYRLYLRRLSGVSSSHSLQCNLNNSFMNPQDPPFGPMASFNGIDLQTLSVTGHLSPQSLAALQATEFRRPATAKSSMSMALVDQNNLFSFENPKLRFVDDQTPHLNNSKPINLFHGIPTKMEPKQLAIMHPSVQTQGNINMPLNIKTEHGGTQLMHHLSHQQTGGQALSNSPASHLPRISSSFPIISGSITSRNGTADSTQGPGYNLVSPASLMMNFPMNQLTELSNNFSLPSDSTVSTLTCKGVFQEEISSDLHGSDGLMSSYDVFNDLHLQKSHDWDSQNVGSFAFGTSHHGNFIQDSFDVSPSTLIHHGFPPSQTNGQNHNSSSSGKTIFPFSDATQPENAQSNAEKLPLDPGDVKPQRIPDASYQTDLLPENFGQDELLSVFLKQEQQGDNGSVDFSGYQTENICV 683
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
17 301283 310577 + Cp4.1LG17g00470.1 Cpe17g00047 483365

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cpe17g00047 683 Pfam Myb-like DNA-binding domain 226 276 IPR001005 -
Cpe17g00047 683 MobiDBLite consensus disorder prediction 186 200 - -
Cpe17g00047 683 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 223 280 IPR017930 -
Cpe17g00047 683 MobiDBLite consensus disorder prediction 170 185 - -
Cpe17g00047 683 SUPERFAMILY Homeodomain-like 221 281 IPR009057 -
Cpe17g00047 683 Gene3D - 221 283 - -
Cpe17g00047 683 SUPERFAMILY CheY-like 32 167 IPR011006 -
Cpe17g00047 683 MobiDBLite consensus disorder prediction 201 221 - -
Cpe17g00047 683 CDD REC_typeB_ARR-like 35 160 - -
Cpe17g00047 683 MobiDBLite consensus disorder prediction 580 620 - -
Cpe17g00047 683 Gene3D - 33 177 - -
Cpe17g00047 683 Pfam Response regulator receiver domain 35 154 IPR001789 GO:0000160
Cpe17g00047 683 PIRSF RR_ARR_type-B 14 673 IPR017053 GO:0003677|GO:0003700|GO:0009736
Cpe17g00047 683 PANTHER TWO-COMPONENT RESPONSE REGULATOR 15 656 IPR045279 GO:0009736
Cpe17g00047 683 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 224 277 IPR006447 GO:0003677
Cpe17g00047 683 MobiDBLite consensus disorder prediction 580 637 - -
Cpe17g00047 683 ProSiteProfiles Response regulatory domain profile. 34 160 IPR001789 GO:0000160
Cpe17g00047 683 PANTHER TWO-COMPONENT RESPONSE REGULATOR 15 656 - -
Cpe17g00047 683 MobiDBLite consensus disorder prediction 170 221 - -
Cpe17g00047 683 SMART REC_2 33 156 IPR001789 GO:0000160
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe17g00047 - - K14491 csv:101210138 1097.03
       

WGDs- Genes

Select Gene_1 Gene_2 Event_name
Cpe08g00165 Cpe17g00047 CCT
Cpe03g01344 Cpe17g00047 CCT
Cpe03g01344 Cpe17g00047 ECH
Cpe08g00165 Cpe17g00047 ECH
Cpe12g00300 Cpe17g00047 CST
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe02g00336 Cpe-Chr2:1805259 Cpe17g00047 Cpe-Chr17:301283 1.23E-69 dispersed
Cpe07g00041 Cpe-Chr7:203304 Cpe17g00047 Cpe-Chr17:301283 6.96E-92 dispersed
Cpe17g00047 Cpe-Chr17:301283 Cpe18g00551 Cpe-Chr18:6077369 4.30E-86 dispersed
Cpe12g00300 Cpe-Chr12:1997163 Cpe17g00047 Cpe-Chr17:301283 0 wgd
Cpe17g00047 Cpe-Chr17:301283 Cpe17g00768 Cpe-Chr17:6046302 2.72E-12 wgd
Cpe17g00047 Cpe-Chr17:301283 Cpe03g01344 Cpe-Chr3:10903145 0 wgd
Cpe17g00047 Cpe-Chr17:301283 Cpe08g00165 Cpe-Chr8:1065824 0 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi5g113 Blo01g00060 . Bda03g01158 Bda08g00304 Bpe04g01103 . Bma04g01144 Bma05g01022 Cmo08g01225 Cmo17g00339 Cma06g01548 . Car06g01314 Car14g01419 Sed02g1152 Cpe08g00165 Cpe03g01344 Bhi01g01057 Tan10g1051 Cmetu11g1360 Lac11g0905 Hepe05g1404 . Lcy11g1369 Cla06g00448 Cam06g0476 Cec06g0481 Cco06g0479 Clacu06g0463 Cmu06g0463 Cre06g1238 Cone14ag0738 Cone15ag0748 Cone7ag0120 Cone4ag0123 . Csa06g01765 Chy11g01546 . . Blo07g00160 . . Bpe05g00823 Bpe13g00682 . Bma06g01483 . . Cmo14g01636 Cma08g01254 Cma17g00351 Car08g01126 Car17g00322 Cpe12g00300 Cpe17g00047 Bhi12g01899 . . . . . Lcy12g0777 Cla05g00679 Cam05g0746 Cec05g0752 Cco05g0752 Clacu05g0738 Cmu05g0703 Cre05g0777 Lsi09g01466 Csa03g01497 Chy06g00735 Cme11g02055
       

Syn-Families

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Cpe11g00049 . 54 258 Response Regulator Gene Family AT3G16857 51.8 3.2e-52 203.8
Cpe18g00551 CST 59 319 Response Regulator Gene Family AT3G16857 53.3 7.5e-49 192.6
Cpe06g00305 . 1 317 Response Regulator Gene Family AT4G31920 58.8 2.1e-87 320.5
Cpe04g01239 CST 18 399 Response Regulator Gene Family AT4G31920 52.6 1.5e-85 314.3
Cpe18g00551 CST 18 317 Response Regulator Gene Family AT4G31920 58.3 4.9e-76 282.7
Cpe12g00300 CCT,CST,ECH 41 320 Response Regulator Gene Family AT4G31920 51.7 2.1e-71 267.3
Cpe17g00047 CCT,CST,ECH 25 300 Response Regulator Gene Family AT4G31920 51.6 4.4e-69 259.6
Cpe08g00165 CCT,CST,ECH 19 270 Response Regulator Gene Family AT4G31920 54.9 7.6e-69 258.8
Cpe03g01344 CCT,CST,ECH 16 290 Response Regulator Gene Family AT4G31920 50.7 7.8e-66 248.8
Cpe11g00049 . 13 261 Response Regulator Gene Family AT4G31920 52.0 7.3e-64 242.3
Cpe06g00305 . 93 256 Response Regulator Gene Family AT1G67710 52.9 3.9e-39 159.8
Cpe08g00165 CCT,CST,ECH 99 261 Response Regulator Gene Family AT1G67710 52.7 6.6e-39 159.1
Cpe06g00305 . 1 349 Response Regulator Gene Family AT2G25180 62.0 6.9e-100 362.1
Cpe04g01239 CST 16 403 Response Regulator Gene Family AT2G25180 53.3 1.4e-97 354.4
Cpe18g00551 CST 16 316 Response Regulator Gene Family AT2G25180 59.8 3.4e-75 280.0
Cpe12g00300 CCT,CST,ECH 41 298 Response Regulator Gene Family AT2G25180 56.7 6.5e-74 275.8
Cpe03g01344 CCT,CST,ECH 8 310 Response Regulator Gene Family AT2G25180 51.3 1.4e-73 274.6
Cpe17g00047 CCT,CST,ECH 27 300 Response Regulator Gene Family AT2G25180 54.5 7.1e-73 272.3
Cpe11g00049 . 13 258 Response Regulator Gene Family AT2G25180 54.8 2.6e-67 253.8
Cpe07g00041 . 11 270 Response Regulator Gene Family AT2G25180 51.9 3.8e-66 250.0
Cpe12g00300 CCT,CST,ECH 102 337 Response Regulator Gene Family AT2G01760 50.6 4.4e-53 205.7
Cpe08g00165 CCT,CST,ECH 79 308 Response Regulator Gene Family AT2G01760 50.4 7.5e-53 204.9
Cpe11g00049 . 74 261 Response Regulator Gene Family AT2G01760 51.0 2.7e-47 186.4
Cpe04g01239 CST 79 288 Response Regulator Gene Family AT2G01760 53.5 2.8e-44 176.4
Cpe06g00305 . 8 314 Response Regulator Gene Family AT5G58080 56.9 3.5e-78 290.0
Cpe12g00300 CCT,CST,ECH 41 285 Response Regulator Gene Family AT5G58080 56.1 1.4e-66 251.5
Cpe18g00551 CST 15 329 Response Regulator Gene Family AT5G58080 51.9 5.8e-65 246.1
Cpe11g00049 . 11 260 Response Regulator Gene Family AT5G58080 51.0 4.6e-62 236.5
Cpe12g00300 CCT,CST,ECH 41 265 Response Regulator Gene Family AT4G16110 66.5 2.2e-78 290.8
Cpe08g00165 CCT,CST,ECH 20 241 Response Regulator Gene Family AT4G16110 66.7 2.4e-77 287.3
Cpe17g00047 CCT,CST,ECH 26 262 Response Regulator Gene Family AT4G16110 62.9 1.0e-75 282.0
Cpe03g01344 CCT,CST,ECH 12 261 Response Regulator Gene Family AT4G16110 61.1 8.5e-75 278.9
Cpe06g00305 . 11 234 Response Regulator Gene Family AT4G16110 59.5 1.8e-61 234.6
Cpe11g00049 . 12 237 Response Regulator Gene Family AT4G16110 54.0 2.5e-58 224.2
Cpe04g01239 CST 17 249 Response Regulator Gene Family AT4G16110 54.7 3.6e-57 220.3
Cpe07g00041 . 10 249 Response Regulator Gene Family AT4G16110 51.0 2.0e-55 214.5
Cpe18g00551 CST 5 290 Response Regulator Gene Family AT4G16110 52.6 1.4e-53 208.4
Cpe02g00336 . 12 138 Response Regulator Gene Family AT4G16110 70.9 5.7e-47 186.4
Cpe07g01132 . 18 284 Response Regulator Gene Family AT4G16110 50.9 2.8e-46 184.1
Cpe18g00823 . 7 172 Response Regulator Gene Family AT3G48100 65.3 3.9e-54 208.4
Cpe01g01415 . 29 162 Response Regulator Gene Family AT3G48100 70.9 1.7e-49 193.0
Cpe01g01415 . 1 175 Response Regulator Gene Family AT1G59940 64.8 2.5e-56 216.5
Cpe18g00823 . 7 148 Response Regulator Gene Family AT1G59940 66.0 3.7e-47 186.0
Cpe01g01205 . 9 161 Response Regulator Gene Family AT1G59940 56.9 1.5e-37 154.1
Cpe01g01415 . 16 199 Response Regulator Gene Family AT1G10470 64.1 1.6e-55 213.4
Cpe18g00823 . 21 148 Response Regulator Gene Family AT1G10470 71.9 6.8e-46 181.4
Cpe18g00823 . 7 172 Response Regulator Gene Family AT3G48100 65.3 3.9e-54 208.4
Cpe01g01415 . 29 162 Response Regulator Gene Family AT3G48100 70.9 1.7e-49 193.0
Cpe18g00823 . 24 172 Response Regulator Gene Family AT5G62920 68.5 2.0e-50 196.1
Cpe01g01415 . 25 175 Response Regulator Gene Family AT5G62920 66.9 5.5e-48 188.0
Cpe18g00823 . 23 171 Response Regulator Gene Family AT1G19050 68.2 2.3e-50 196.1
Cpe01g01415 . 24 185 Response Regulator Gene Family AT1G19050 58.9 4.9e-45 178.3
Cpe01g01205 . 3 165 Response Regulator Gene Family AT2G41310 61.6 4.8e-46 181.8
Cpe01g01415 . 25 158 Response Regulator Gene Family AT2G41310 58.2 3.9e-40 162.2
Cpe03g00456 . 40 168 Response Regulator Gene Family AT2G41310 59.1 7.4e-39 157.9
Cpe18g00823 . 22 148 Response Regulator Gene Family AT2G41310 60.0 1.3e-38 157.1
Cpe01g01205 . 4 165 Response Regulator Gene Family AT3G57040 62.3 1.6e-47 186.8
Cpe03g00456 . 40 170 Response Regulator Gene Family AT3G57040 62.4 1.8e-43 173.3
Cpe01g01415 . 25 158 Response Regulator Gene Family AT3G57040 58.0 2.2e-41 166.4
Cpe18g00823 . 22 148 Response Regulator Gene Family AT3G57040 60.6 2.0e-39 159.8
Cpe18g00823 . 16 171 Response Regulator Gene Family AT1G74890 69.2 7.0e-52 201.1
Cpe01g01415 . 25 187 Response Regulator Gene Family AT1G74890 60.6 7.5e-46 181.0
Cpe01g01205 . 5 166 Response Regulator Gene Family AT1G74890 54.3 2.9e-37 152.5
Cpe01g01415 . 26 159 Response Regulator Gene Family AT2G40670 54.0 4.6e-38 154.8
Cpe01g01415 . 26 159 Response Regulator Gene Family AT3G56380 53.3 5.1e-39 157.9
Cpe18g00823 . 10 154 Response Regulator Gene Family AT3G56380 56.5 3.3e-38 155.2
Cpe11g00049 . 54 258 Response Regulator Gene Family AT3G16857 51.8 3.2e-52 203.8
Cpe18g00551 CST 59 319 Response Regulator Gene Family AT3G16857 53.3 7.5e-49 192.6
Cpe12g00300 CCT,CST,ECH 41 265 Response Regulator Gene Family AT4G16110 66.5 2.2e-78 290.8
Cpe08g00165 CCT,CST,ECH 20 241 Response Regulator Gene Family AT4G16110 66.7 2.4e-77 287.3
Cpe17g00047 CCT,CST,ECH 26 262 Response Regulator Gene Family AT4G16110 62.9 1.0e-75 282.0
Cpe03g01344 CCT,CST,ECH 12 261 Response Regulator Gene Family AT4G16110 61.1 8.5e-75 278.9
Cpe06g00305 . 11 234 Response Regulator Gene Family AT4G16110 59.5 1.8e-61 234.6
Cpe11g00049 . 12 237 Response Regulator Gene Family AT4G16110 54.0 2.5e-58 224.2
Cpe04g01239 CST 17 249 Response Regulator Gene Family AT4G16110 54.7 3.6e-57 220.3
Cpe07g00041 . 10 249 Response Regulator Gene Family AT4G16110 51.0 2.0e-55 214.5
Cpe18g00551 CST 5 290 Response Regulator Gene Family AT4G16110 52.6 1.4e-53 208.4
Cpe02g00336 . 12 138 Response Regulator Gene Family AT4G16110 70.9 5.7e-47 186.4
Cpe07g01132 . 18 284 Response Regulator Gene Family AT4G16110 50.9 2.8e-46 184.1
Cpe06g00305 . 1 317 Response Regulator Gene Family AT4G31920 58.8 2.1e-87 320.5
Cpe04g01239 CST 18 399 Response Regulator Gene Family AT4G31920 52.6 1.5e-85 314.3
Cpe18g00551 CST 18 317 Response Regulator Gene Family AT4G31920 58.3 4.9e-76 282.7
Cpe12g00300 CCT,CST,ECH 41 320 Response Regulator Gene Family AT4G31920 51.7 2.1e-71 267.3
Cpe17g00047 CCT,CST,ECH 25 300 Response Regulator Gene Family AT4G31920 51.6 4.4e-69 259.6
Cpe08g00165 CCT,CST,ECH 19 270 Response Regulator Gene Family AT4G31920 54.9 7.6e-69 258.8
Cpe03g01344 CCT,CST,ECH 16 290 Response Regulator Gene Family AT4G31920 50.7 7.8e-66 248.8
Cpe11g00049 . 13 261 Response Regulator Gene Family AT4G31920 52.0 7.3e-64 242.3
Cpe06g00305 . 93 256 Response Regulator Gene Family AT1G67710 52.9 3.9e-39 159.8
Cpe08g00165 CCT,CST,ECH 99 261 Response Regulator Gene Family AT1G67710 52.7 6.6e-39 159.1
Cpe06g00305 . 1 349 Response Regulator Gene Family AT2G25180 62.0 6.9e-100 362.1
Cpe04g01239 CST 16 403 Response Regulator Gene Family AT2G25180 53.3 1.4e-97 354.4
Cpe18g00551 CST 16 316 Response Regulator Gene Family AT2G25180 59.8 3.4e-75 280.0
Cpe12g00300 CCT,CST,ECH 41 298 Response Regulator Gene Family AT2G25180 56.7 6.5e-74 275.8
Cpe03g01344 CCT,CST,ECH 8 310 Response Regulator Gene Family AT2G25180 51.3 1.4e-73 274.6
Cpe17g00047 CCT,CST,ECH 27 300 Response Regulator Gene Family AT2G25180 54.5 7.1e-73 272.3
Cpe11g00049 . 13 258 Response Regulator Gene Family AT2G25180 54.8 2.6e-67 253.8
Cpe07g00041 . 11 270 Response Regulator Gene Family AT2G25180 51.9 3.8e-66 250.0
Cpe12g00300 CCT,CST,ECH 102 337 Response Regulator Gene Family AT2G01760 50.6 4.4e-53 205.7
Cpe08g00165 CCT,CST,ECH 79 308 Response Regulator Gene Family AT2G01760 50.4 7.5e-53 204.9
Cpe11g00049 . 74 261 Response Regulator Gene Family AT2G01760 51.0 2.7e-47 186.4
Cpe04g01239 CST 79 288 Response Regulator Gene Family AT2G01760 53.5 2.8e-44 176.4
Cpe06g00305 . 8 314 Response Regulator Gene Family AT5G58080 56.9 3.5e-78 290.0
Cpe12g00300 CCT,CST,ECH 41 285 Response Regulator Gene Family AT5G58080 56.1 1.4e-66 251.5
Cpe18g00551 CST 15 329 Response Regulator Gene Family AT5G58080 51.9 5.8e-65 246.1
Cpe11g00049 . 11 260 Response Regulator Gene Family AT5G58080 51.0 4.6e-62 236.5
Cpe02g01049 . 19 565 Response Regulator Gene Family AT5G61380 50.5 2.2e-141 500.0
Cpe04g01485 . 64 324 Response Regulator Gene Family AT5G61380 60.3 6.7e-82 302.4
Cpe19g00394 . 40 216 Response Regulator Gene Family AT5G60100 70.8 2.5e-61 233.4
Cpe13g00339 CCT,ECH 27 164 Response Regulator Gene Family AT5G60100 57.2 1.7e-41 167.5
Cpe03g01835 . 63 197 Response Regulator Gene Family AT5G60100 60.0 1.4e-40 164.5
Cpe19g00394 . 69 212 Response Regulator Gene Family AT5G24470 56.3 1.4e-41 168.3
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0001295 2 3 2 2 2 2 4 2 2 2 2 2 4 2 2 4 2 4 4 2 2 2 2 2 2 2 2 7 3 1 76
       

Regulatory proteins

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
50764 PF00072 Response_reg 3.10E-17 CL0304 Cpe TF
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Cpe17g00047 Cpe_Chr17 FPKM 4.452929 5.035159 6.296087 5.960643 5.381024 4.35345 5.982885 12.487569 12.578685 12.221235