Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe17g00066 ATGGCATTTTGGTGGACTGTGTTTGTTCTAGGATTTGTTTACGCCATCTGTAGGTTTCTCGTGATGCTCATCCCTCCGAATGTGCCTTCAATCGAAGTTGACGCATCTGACGTTGTGGACGACGGGAATCAGGCGCCGGAGAATAGCTACATCTATATTCCACCTAGAGTAAAGACACAACAGCAAGACAAGAAGGTCCAATGTTACGAGCCTGCAAATATGAAATACTTGGGATTCTTTCCTGCATTGACACGAGACGAGGTCAAGGAGCGTGTTGTTTCAGCCAGAAAAGCACAGAACGAATGGGCCAAAAGTAGCTTCAAGCAAAGGCGTTTGCTTTTACGGATAATTTTGAAGTATATAATTGAACACCAAAAGCTAATTTGCGAGATCTCCTCCCGTGACACTGGGAAAACGATAGTGGACGCTAGTATAGGAGAAGTTATGGCGATATGTGAAAAGATTACTTGGCTTCTTTCAGAGGGTGAGAAATGGCTGAAGCCTGAGAGCCGATCATGTGGGAGGGCAACACTTCACAAAAAAGCACGAGTGGAATTTCATCCCCTTGGAGTCATTGGGGCAATAGTTCCATGGAACTATCCATTCCATAACATTTTCAATCCAGTGCTTGCAGCAGTCTTTGCAGGAAACGGCATTGTAGTTAAGATTTCAGAACATGCAAGTTGGTCCGGATGCTTCTACATCAGGATTATCCAAGCTGCACTTGCTGCTGTTGGAGCTCCCGAGAGTTTGGTCGATGTGATAACAGGGTTTTCTGAAACAGGTGAAGCGCTAGTATCTTCAGTAGATAAAATGATATTCATTGGGTCTACTGGTGTGGGTAGGATGATAATGAAAACTGCTGCCGAGACACTTATTCCAGTTACTCTTGAGTTGGGTGGGAAGGACGCTTTTATTGTCTGCGAGGATGTAGATTTGGATCACGTTGTAAACGTTGCTCTCAGGGCTTCTATTACATCAAGTGGACATAATTGTAATGGAGCTGAGAGATTTTATGTTCACAAGAACATTTATTCTTCGTTTGTGGATAAAATATCAGAACGTGTAAAGGCTATTACAGTTGCATTTGGACCAATCCTGCCTATAATGAAATTCAGCACAGATGATGAGGTCGTGAAGCTTGCAAATGATTCAAAATTTGGGCTTGGTTGTGGTGTGTTTTCTGGCAGCCAGCAGCGTGCCAGGACCATCGCTTTGCAGATACGTTGTGGAAGTGTTGTAATTAATGACTTCGCCACAAATTATTTTTGTCAGTCCTTGCCATTTGGTGGTGTGAAAGAGAGTGGATTCGGTCGATTTTCGGGCGTTGAAGGATTACGAGCTTGTTGTATCGTCAAAGCAGTGGTCGAGGACAGGTGGTGGCCGTACATTCAAACTAAGTATCCCAAGCCTCTTACGTATCCTGTTGCAGACAACGCTTTTGAGTTCCAGATGTCAGTTGTTGAAGCAACGTACGGCTTGAACATATGGGATCGACTAAGAGCATTGATCAATGTTCTGAAGATGCTGTCCCAGCAGAACACTTCGGCTAAACATCGCCCTGTCATTGACGATGGAGGTAAGAAAGCTGATTGA 1596 44.17 MAFWWTVFVLGFVYAICRFLVMLIPPNVPSIEVDASDVVDDGNQAPENSYIYIPPRVKTQQQDKKVQCYEPANMKYLGFFPALTRDEVKERVVSARKAQNEWAKSSFKQRRLLLRIILKYIIEHQKLICEISSRDTGKTIVDASIGEVMAICEKITWLLSEGEKWLKPESRSCGRATLHKKARVEFHPLGVIGAIVPWNYPFHNIFNPVLAAVFAGNGIVVKISEHASWSGCFYIRIIQAALAAVGAPESLVDVITGFSETGEALVSSVDKMIFIGSTGVGRMIMKTAAETLIPVTLELGGKDAFIVCEDVDLDHVVNVALRASITSSGHNCNGAERFYVHKNIYSSFVDKISERVKAITVAFGPILPIMKFSTDDEVVKLANDSKFGLGCGVFSGSQQRARTIALQIRCGSVVINDFATNYFCQSLPFGGVKESGFGRFSGVEGLRACCIVKAVVEDRWWPYIQTKYPKPLTYPVADNAFEFQMSVVEATYGLNIWDRLRALINVLKMLSQQNTSAKHRPVIDDGGKKAD 531
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
17 391085 396354 - Cp4.1LG17g00220.1 Cpe17g00066 483384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe17g00066 531 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 305 361 IPR016163 GO:0016620
Cpe17g00066 531 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 436 448 IPR016162 GO:0016491
Cpe17g00066 531 PANTHER ALDEHYDE DEHYDROGENASE-LIKE PROTEIN YHR039C-RELATED 362 490 - -
Cpe17g00066 531 PANTHER ALDEHYDE DEHYDROGENASE-LIKE PROTEIN YHR039C-RELATED 1 361 - -
Cpe17g00066 531 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 363 435 IPR016163 GO:0016620
Cpe17g00066 531 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 362 490 - -
Cpe17g00066 531 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 65 304 IPR016162 GO:0016491
Cpe17g00066 531 SUPERFAMILY ALDH-like 51 457 IPR016161 GO:0016491
Cpe17g00066 531 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 297 304 IPR029510 GO:0016491
Cpe17g00066 531 Pfam Aldehyde dehydrogenase family 61 361 IPR015590 GO:0016491
Cpe17g00066 531 Pfam Aldehyde dehydrogenase family 363 455 IPR015590 GO:0016491
Cpe17g00066 531 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 1 361 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe12g00317 Cpe17g00066 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe07g01153 Cpe-Chr7:10092621 Cpe17g00066 Cpe-Chr17:391085 6.29E-12 dispersed
Cpe17g00066 Cpe-Chr17:391085 Cpe04g01548 Cpe-Chr4:12131591 1.42E-40 dispersed
Cpe12g00317 Cpe-Chr12:2101994 Cpe17g00066 Cpe-Chr17:391085 1.03E-100 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe17g00066 - - cmo:103497791 672.544