Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe17g00075 TGGAGTGGAGGTTGTCAATGGGTGAATGCAAAGATTCTTATGTTTTCGTTGATCCAGGTTTCGTCTTCCAAGGAATTTCCCCAAAAGGATATCTTCTTTGCTTGCTCTTGTTCCGTTAGATCGGATCGGTGCGTCTTGATGGCGTCATCTGTTCTTTCGAACTCCGATCGCATGCGGGAGTCTTCAAGGAAGCAAAAGAAGAAGAAAAACCACGGCAACAGAGACCGTCATCAAAACCAGAACCATATTAACTGGAAATCTCAAGCTCAGAAAGAAATTTACTCGTCCAAGCTGGTACGAGCGTTGAATCAAGTGAGGCTCAGTCCTTCGAATGAGGCGCCCCGCCGTGGTAGAGCCGTACGCGAGGCCGCCGACAGAATCCTTGCCGTCGCCGCCAAGGGGAGAACCAGGTGGAGCCGAGCCATTCTAACGAACAGGCTGAAGCTCAAGTTCAGGAAGCCGAAGAAACAGAGAGCATCCACCGCTGGAAACAACCGCCCAAAGAAACCTAGAGTCAGCGTATTGCGGTTGAAAGGAAAAACGTTGCCGGCGGTGCAAAGGAAAGTTAGGGTTCTTGGACGGCTAGTTCCCGGTTGCCGGAAAGAACCTTTGCCGGTTATCCTAGAAGAGGCCACCGATTACATAGCTGCACTTGAAATGCAAGTTCGAGCTATGAGTGCCCTCGCCGAGTTGCTCTCGGCCTCAACTTCTGTTGCAGGCTCTAGCTCCGCTCCTCCAAGCTGA 744 51.34 WSGGCQWVNAKILMFSLIQVSSSKEFPQKDIFFACSCSVRSDRCVLMASSVLSNSDRMRESSRKQKKKKNHGNRDRHQNQNHINWKSQAQKEIYSSKLVRALNQVRLSPSNEAPRRGRAVREAADRILAVAAKGRTRWSRAILTNRLKLKFRKPKKQRASTAGNNRPKKPRVSVLRLKGKTLPAVQRKVRVLGRLVPGCRKEPLPVILEEATDYIAALEMQVRAMSALAELLSASTSVAGSSSAPPS 247
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
17 429216 431758 + Cp4.1LG17g00290.1 Cpe17g00075 483393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe17g00075 247 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 60 246 IPR044660 GO:0006355
Cpe17g00075 247 MobiDBLite consensus disorder prediction 55 87 - -
Cpe17g00075 247 CDD bHLH_AtIBH1_like 174 229 IPR044549 GO:0006355
Cpe17g00075 247 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 188 235 IPR036638 GO:0046983
Cpe17g00075 247 PANTHER TRANSCRIPTION FACTOR BHLH148-LIKE ISOFORM X1 60 246 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe08g00146 Cpe-Chr8:956328 Cpe17g00075 Cpe-Chr17:429216 3.17E-88 dispersed
Cpe17g00075 Cpe-Chr17:429216 Cpe18g00019 Cpe-Chr18:326926 1.75E-51 dispersed
Cpe11g00869 Cpe-Chr11:7036864 Cpe17g00075 Cpe-Chr17:429216 3.29E-44 wgd
Cpe12g00330 Cpe-Chr12:2174973 Cpe17g00075 Cpe-Chr17:429216 5.43E-131 wgd
Cpe17g00075 Cpe-Chr17:429216 Cpe03g01321 Cpe-Chr3:10747008 2.73E-76 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe17g00075 - - csv:101220618 311.612