Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cpe17g00084 | ATGGGTGCTTGTGTTCTGATTCCTGCGTGCCTCATTTCAAGAATACTCGAGCCCTTTGCTGAGATCGGCAGTCACAGGATGGTAGCTGAAGCTGAGATCGGCAGTCACAGGATGGTAGCTGAAGCTGAGATCATGTGCACCAAAACCGTTCCTGTCATGAACCTCAACTATCATCTACGCGTAGCCGAAGACCGCGATGTGCAGATCGATTTGCCGCATCCTTCTTCTTCACCTATCTTTCCCGAGGCAGTTAAATGTTCAGATATCGCTGAAGATGCCCATATAGTGTCAACTGCCATAGATTTTGTTCCAAATATTCGATCTGGTAGCTACGCGGACATTGGAGCTCGGGATTCCATGGATGATGAACATATCTGCATTGATGATCTGTCTACCCACCTCAGATCTATGTTCAAGTGTCCTGTGCCAAGTGGTTTTTATGCTGTTTTCGATGGTCATGGAGGGCCTCATGCAGCTGGCTTTATCAAGAGGAATGCCATTAGATTATTCTTTGAAGATGCTGATTGGTTAAAAATGCTGGATATTAGTTCTATTTCCATGAAAGATTTGGAGAGTTCTCATCGCAAAGCGTTTCTACTGGCAGATCTTGCCTTGGCTGATGAGCAAAGTGTTGGAAGCTCATGTGGGACAACTGCGTTGACGGCATTGATTCTTGGAAGTCATTTGCTTGTTGCAAATGCTGGTGACTGCCGAGCGGTCCTATGTAGGAAAGGTGTAGCAGTTCCGATGTCTCAAGATCACAGACCTTCTAATTTACTCGAGCTCAAGCGAGTGGAAGCGATGGGAGGGTTCGTAGATGATGGGTATGTGAATGGGTATATTTCAGTAACGAGAACCTTGGGGGATTGGGACCTGAAATTGCCAAATGGCTCCTCATCACCTCTGATTTCTGAGCCACAAGTGGAGCATGCTATTTTAACGAACGATGACGAGTTCTTGATCCTTGGCTGTGATGGGATTTGGGACGTAATGTCAAGCCAATACGCCGTCAGTCTTGTTCGACGTGGGTTGAGGAAGCACAATGACCCTCATCAAAGTTCCCAAGAGTTAGTCTTGGAAGCCTTGCGCCTCAACACATCAGATAACCTTACTGCAATAGTAATCTGCCTTGCTTCTCCCAGCTGCATTCCTCAGCAGCGGATATGGAAGCCGCGTAGTCTGACCGAAGAGGCGAGAATCGCACAGCTTCAGATCCAACCCCAATTCCAGTTTCTCAATTTCTCCATCTCGCCCAATCAGATGGCACTCGCGAACTGTGCTAGGCGGAAGCCCAACCTTCTATACAGAAACCTCCCTATTTCTTACTCTCATTCCTTCAATCACTCTTTCTCATTCGCATCATTCTCCAGACGCTTTGCCTCCTCTGGATCCGATGAAAACGACGTTGTCGTTATCGGAGGTGGGCCTGGTGGCTATGTCGCGGCAATCAAGGCCGCTCAGCTTGGCCTCAAAACCACCTGTATTGAAAAGCGTGGGGCTCTTGGCGGAACTTGCCTCAACGTTGGCTGTATTCCCTCCAAGGCTCTTCTCCACTCCTCCCACATGTACCATGAAGCTCAGCATTCATTCGCTAGCCATGGAGTGAAGTTTTCTTCTGTTGAGGTTGATTTACCAGCCATGATGGCACAAAAGGATAAAGCAGTAGGCAATCTCACACGTGGTATTGAAGGTCTTTTTAAGAAGAATAAAGTGAACTATGTTAAAGGCTACGGAAAATTGGTTTCCCCTTCTGAAGTTTCTGTGGACACCATTGAAGGTGGTAACACGGTGGTGAAAGGAAAAAATATAATAATTGCAACTGGATCTGATGTCAAATCTTTACCCGGAGTCACCATTGACGAAAAGAAAATTGTGTCATCGACAGGAGCCTTAGCTTTANTAATTGCAACTGGATCTGATGTCAAATCTTTACCCGGAGTCATCATTGACGAAAAGAAAATTGTGTCATCAACAGGAGCCTTAGCTTTGTCAAAAATCCCCAAGAAACTTGTTGTAGTTGGAGCTGGATACATTGGGCTAGAGATGGGATCAGTGTGGGGTCGACTTGGATCCGAGATCACAGTTGTTGAGTTTGCCCCTGAGATAGTCCCAACTATGGACGGGGAAGTCCGGAAGCAATTTCAGCGTGCTCTTGAAAAGCAAGGAATGAAATTTATGCTAAAAACTAAGGTGGTTGGAGTTGATACTTCAGGGGATGGCGTGAAGCTGACTCTTGAACCGGCATCTGGTGGTGAACAGACGACACTCGAAGCAGATGTTGTTCTTGTATCTGCTGGTAGAACTCCGTTCACTGCTGGACTTGGGCTAGACAAGTTAGGGATTGAAACTGATAAGGCAGGGCGGATTTTGGTAAATGAAAGATTTGTTACAAATGTGGATGGTGTTTATGCAATTGGAGACGTAATTCCTGGGCCAATGTTAGCTCACAAGGCTGAAGAGGATGGGGTTGCCTGCGTGGAGTTCATAGCTGGGAAGATCGGCCATGTTGACTATGACAAAGTCCCTGGGGTTGTCTATACACATCCAGAGGTTGCATCTGTTGGGAAGACTGAGGAGCAGGTAAAGGCACTAGGTGTGGAATATCGTGTTGGGAAGTTTCCATTCTTGGCAAATAGCAGGGCAAAAGCAATTGATGATGCTGAAGGGGTGGTCAAAATTTTGGCGGAGAAGGAGACAGACAAGATACTTGGCGTCCATATCATGGCGCCCAATGCTGGGGAGCTTATCCACGAGGCAGTACTGGCCTTGCAATACGACGCAGCTAGTGAGGATATTGCCCGCGTTTGCCATGCTCATCCAACGATGAGTGAGGCATTAAAGGAGGCCGCCATGGCAACTTATGACAAGCCCATTCACATCTATCAAGACCCCCAAGAGGCTTGTAAACAAGCTATTCTACATGGAGCAGACACCGATGAATCGTCAAGTATTGGTTATAAAAATATTCAGCTAAACCGGACTGCATCAACCGCTGAAGTAGCAGCAGGTGCCTTCATCTTCTCGTGTGCTTCCTTTGAATCAGCATCTACAAACTTTTTAATTTCAACATTTTGGCCTGCGAAGTCCCTTATCTCCCTGATCTGTTGA | 3108 | 46.69 | MGACVLIPACLISRILEPFAEIGSHRMVAEAEIGSHRMVAEAEIMCTKTVPVMNLNYHLRVAEDRDVQIDLPHPSSSPIFPEAVKCSDIAEDAHIVSTAIDFVPNIRSGSYADIGARDSMDDEHICIDDLSTHLRSMFKCPVPSGFYAVFDGHGGPHAAGFIKRNAIRLFFEDADWLKMLDISSISMKDLESSHRKAFLLADLALADEQSVGSSCGTTALTALILGSHLLVANAGDCRAVLCRKGVAVPMSQDHRPSNLLELKRVEAMGGFVDDGYVNGYISVTRTLGDWDLKLPNGSSSPLISEPQVEHAILTNDDEFLILGCDGIWDVMSSQYAVSLVRRGLRKHNDPHQSSQELVLEALRLNTSDNLTAIVICLASPSCIPQQRIWKPRSLTEEARIAQLQIQPQFQFLNFSISPNQMALANCARRKPNLLYRNLPISYSHSFNHSFSFASFSRRFASSGSDENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAQHSFASHGVKFSSVEVDLPAMMAQKDKAVGNLTRGIEGLFKKNKVNYVKGYGKLVSPSEVSVDTIEGGNTVVKGKNIIIATGSDVKSLPGVTIDEKKIVSSTGALALXIATGSDVKSLPGVIIDEKKIVSSTGALALSKIPKKLVVVGAGYIGLEMGSVWGRLGSEITVVEFAPEIVPTMDGEVRKQFQRALEKQGMKFMLKTKVVGVDTSGDGVKLTLEPASGGEQTTLEADVVLVSAGRTPFTAGLGLDKLGIETDKAGRILVNERFVTNVDGVYAIGDVIPGPMLAHKAEEDGVACVEFIAGKIGHVDYDKVPGVVYTHPEVASVGKTEEQVKALGVEYRVGKFPFLANSRAKAIDDAEGVVKILAEKETDKILGVHIMAPNAGELIHEAVLALQYDAASEDIARVCHAHPTMSEALKEAAMATYDKPIHIYQDPQEACKQAILHGADTDESSSIGYKNIQLNRTASTAEVAAGAFIFSCASFESASTNFLISTFWPAKSLISLIC | 1035 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
17 | 475767 | 486058 | - | Cp4.1LG17g00060.1 | Cpe17g00084 | 483402 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cpe17g00084 | 1035 | Gene3D | - | 840 | 960 | IPR016156 | GO:0016491|GO:0050660 | |
Cpe17g00084 | 1035 | PRINTS | FAD-dependent pyridine nucleotide reductase signature | 669 | 687 | - | - | |
Cpe17g00084 | 1035 | PRINTS | FAD-dependent pyridine nucleotide reductase signature | 758 | 774 | - | - | |
Cpe17g00084 | 1035 | PRINTS | FAD-dependent pyridine nucleotide reductase signature | 600 | 618 | - | - | |
Cpe17g00084 | 1035 | PRINTS | FAD-dependent pyridine nucleotide reductase signature | 469 | 488 | - | - | |
Cpe17g00084 | 1035 | PRINTS | FAD-dependent pyridine nucleotide reductase signature | 787 | 809 | - | - | |
Cpe17g00084 | 1035 | Pfam | Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain | 841 | 950 | IPR004099 | GO:0045454 | |
Cpe17g00084 | 1035 | Gene3D | - | 96 | 380 | IPR036457 | - | |
Cpe17g00084 | 1035 | PANTHER | LEGHEMOGLOBIN REDUCTASE | 444 | 633 | - | - | |
Cpe17g00084 | 1035 | SUPERFAMILY | PP2C-like | 99 | 378 | IPR036457 | - | |
Cpe17g00084 | 1035 | SUPERFAMILY | FAD/NAD(P)-binding domain | 465 | 865 | IPR036188 | - | |
Cpe17g00084 | 1035 | SUPERFAMILY | FAD/NAD-linked reductases, dimerisation (C-terminal) domain | 837 | 960 | IPR016156 | GO:0016491|GO:0050660 | |
Cpe17g00084 | 1035 | Gene3D | - | 639 | 832 | IPR036188 | - | |
Cpe17g00084 | 1035 | ProSitePatterns | PPM-type phosphatase domain signature. | 146 | 154 | IPR000222 | GO:0043169 | |
Cpe17g00084 | 1035 | SMART | PP2C_4 | 97 | 375 | IPR001932 | - | |
Cpe17g00084 | 1035 | Gene3D | - | 461 | 635 | IPR036188 | - | |
Cpe17g00084 | 1035 | Pfam | Pyridine nucleotide-disulphide oxidoreductase | 468 | 822 | IPR023753 | GO:0016491 | |
Cpe17g00084 | 1035 | SMART | PP2C_SIG_2 | 122 | 377 | IPR001932 | - | |
Cpe17g00084 | 1035 | Pfam | Protein phosphatase 2C | 115 | 369 | IPR001932 | - | |
Cpe17g00084 | 1035 | ProSiteProfiles | PPM-type phosphatase domain profile. | 107 | 377 | IPR001932 | - | |
Cpe17g00084 | 1035 | CDD | PP2Cc | 106 | 377 | IPR001932 | - | |
Cpe17g00084 | 1035 | ProSitePatterns | Pyridine nucleotide-disulphide oxidoreductases class-I active site. | 502 | 512 | IPR012999 | GO:0016668 | |
Cpe17g00084 | 1035 | PANTHER | DISULFIDE OXIDOREDUCTASE | 444 | 633 | - | - | |
Cpe17g00084 | 1035 | PANTHER | DISULFIDE OXIDOREDUCTASE | 634 | 967 | - | - | |
Cpe17g00084 | 1035 | PRINTS | Pyridine nucleotide disulphide reductase class-I signature | 902 | 917 | - | - | |
Cpe17g00084 | 1035 | PRINTS | Pyridine nucleotide disulphide reductase class-I signature | 468 | 490 | - | - | |
Cpe17g00084 | 1035 | PRINTS | Pyridine nucleotide disulphide reductase class-I signature | 802 | 809 | - | - | |
Cpe17g00084 | 1035 | PRINTS | Pyridine nucleotide disulphide reductase class-I signature | 924 | 944 | - | - | |
Cpe17g00084 | 1035 | PRINTS | Pyridine nucleotide disulphide reductase class-I signature | 759 | 773 | - | - | |
Cpe17g00084 | 1035 | PRINTS | Pyridine nucleotide disulphide reductase class-I signature | 501 | 516 | - | - | |
Cpe17g00084 | 1035 | PRINTS | Pyridine nucleotide disulphide reductase class-I signature | 837 | 858 | - | - | |
Cpe17g00084 | 1035 | PANTHER | LEGHEMOGLOBIN REDUCTASE | 634 | 967 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cpe08g00139 | Cpe-Chr8:898172 | Cpe17g00084 | Cpe-Chr17:475767 | 0 | dispersed | |
Cpe12g00314 | Cpe-Chr12:2073784 | Cpe17g00084 | Cpe-Chr17:475767 | 4.97E-67 | dispersed | |
Cpe12g00869 | Cpe-Chr12:7607690 | Cpe17g00084 | Cpe-Chr17:475767 | 3.29E-107 | dispersed | |
Cpe17g00816 | Cpe-Chr17:6373839 | Cpe17g00084 | Cpe-Chr17:475767 | 2.13E-35 | dispersed | |
Cpe17g00084 | Cpe-Chr17:475767 | Cpe17g00726 | Cpe-Chr17:5769558 | 3.73E-113 | wgd | |
Cpe17g00084 | Cpe-Chr17:475767 | Cpe03g01315 | Cpe-Chr3:10699272 | 0 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
50768 | PF07992 | Pyr_redox_2 | 1.00E-67 | CL0063 | Cpe | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cpe17g00084 | K00382 | - | csv:101207718 | 907.131 |