Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe17g00084 ATGGGTGCTTGTGTTCTGATTCCTGCGTGCCTCATTTCAAGAATACTCGAGCCCTTTGCTGAGATCGGCAGTCACAGGATGGTAGCTGAAGCTGAGATCGGCAGTCACAGGATGGTAGCTGAAGCTGAGATCATGTGCACCAAAACCGTTCCTGTCATGAACCTCAACTATCATCTACGCGTAGCCGAAGACCGCGATGTGCAGATCGATTTGCCGCATCCTTCTTCTTCACCTATCTTTCCCGAGGCAGTTAAATGTTCAGATATCGCTGAAGATGCCCATATAGTGTCAACTGCCATAGATTTTGTTCCAAATATTCGATCTGGTAGCTACGCGGACATTGGAGCTCGGGATTCCATGGATGATGAACATATCTGCATTGATGATCTGTCTACCCACCTCAGATCTATGTTCAAGTGTCCTGTGCCAAGTGGTTTTTATGCTGTTTTCGATGGTCATGGAGGGCCTCATGCAGCTGGCTTTATCAAGAGGAATGCCATTAGATTATTCTTTGAAGATGCTGATTGGTTAAAAATGCTGGATATTAGTTCTATTTCCATGAAAGATTTGGAGAGTTCTCATCGCAAAGCGTTTCTACTGGCAGATCTTGCCTTGGCTGATGAGCAAAGTGTTGGAAGCTCATGTGGGACAACTGCGTTGACGGCATTGATTCTTGGAAGTCATTTGCTTGTTGCAAATGCTGGTGACTGCCGAGCGGTCCTATGTAGGAAAGGTGTAGCAGTTCCGATGTCTCAAGATCACAGACCTTCTAATTTACTCGAGCTCAAGCGAGTGGAAGCGATGGGAGGGTTCGTAGATGATGGGTATGTGAATGGGTATATTTCAGTAACGAGAACCTTGGGGGATTGGGACCTGAAATTGCCAAATGGCTCCTCATCACCTCTGATTTCTGAGCCACAAGTGGAGCATGCTATTTTAACGAACGATGACGAGTTCTTGATCCTTGGCTGTGATGGGATTTGGGACGTAATGTCAAGCCAATACGCCGTCAGTCTTGTTCGACGTGGGTTGAGGAAGCACAATGACCCTCATCAAAGTTCCCAAGAGTTAGTCTTGGAAGCCTTGCGCCTCAACACATCAGATAACCTTACTGCAATAGTAATCTGCCTTGCTTCTCCCAGCTGCATTCCTCAGCAGCGGATATGGAAGCCGCGTAGTCTGACCGAAGAGGCGAGAATCGCACAGCTTCAGATCCAACCCCAATTCCAGTTTCTCAATTTCTCCATCTCGCCCAATCAGATGGCACTCGCGAACTGTGCTAGGCGGAAGCCCAACCTTCTATACAGAAACCTCCCTATTTCTTACTCTCATTCCTTCAATCACTCTTTCTCATTCGCATCATTCTCCAGACGCTTTGCCTCCTCTGGATCCGATGAAAACGACGTTGTCGTTATCGGAGGTGGGCCTGGTGGCTATGTCGCGGCAATCAAGGCCGCTCAGCTTGGCCTCAAAACCACCTGTATTGAAAAGCGTGGGGCTCTTGGCGGAACTTGCCTCAACGTTGGCTGTATTCCCTCCAAGGCTCTTCTCCACTCCTCCCACATGTACCATGAAGCTCAGCATTCATTCGCTAGCCATGGAGTGAAGTTTTCTTCTGTTGAGGTTGATTTACCAGCCATGATGGCACAAAAGGATAAAGCAGTAGGCAATCTCACACGTGGTATTGAAGGTCTTTTTAAGAAGAATAAAGTGAACTATGTTAAAGGCTACGGAAAATTGGTTTCCCCTTCTGAAGTTTCTGTGGACACCATTGAAGGTGGTAACACGGTGGTGAAAGGAAAAAATATAATAATTGCAACTGGATCTGATGTCAAATCTTTACCCGGAGTCACCATTGACGAAAAGAAAATTGTGTCATCGACAGGAGCCTTAGCTTTANTAATTGCAACTGGATCTGATGTCAAATCTTTACCCGGAGTCATCATTGACGAAAAGAAAATTGTGTCATCAACAGGAGCCTTAGCTTTGTCAAAAATCCCCAAGAAACTTGTTGTAGTTGGAGCTGGATACATTGGGCTAGAGATGGGATCAGTGTGGGGTCGACTTGGATCCGAGATCACAGTTGTTGAGTTTGCCCCTGAGATAGTCCCAACTATGGACGGGGAAGTCCGGAAGCAATTTCAGCGTGCTCTTGAAAAGCAAGGAATGAAATTTATGCTAAAAACTAAGGTGGTTGGAGTTGATACTTCAGGGGATGGCGTGAAGCTGACTCTTGAACCGGCATCTGGTGGTGAACAGACGACACTCGAAGCAGATGTTGTTCTTGTATCTGCTGGTAGAACTCCGTTCACTGCTGGACTTGGGCTAGACAAGTTAGGGATTGAAACTGATAAGGCAGGGCGGATTTTGGTAAATGAAAGATTTGTTACAAATGTGGATGGTGTTTATGCAATTGGAGACGTAATTCCTGGGCCAATGTTAGCTCACAAGGCTGAAGAGGATGGGGTTGCCTGCGTGGAGTTCATAGCTGGGAAGATCGGCCATGTTGACTATGACAAAGTCCCTGGGGTTGTCTATACACATCCAGAGGTTGCATCTGTTGGGAAGACTGAGGAGCAGGTAAAGGCACTAGGTGTGGAATATCGTGTTGGGAAGTTTCCATTCTTGGCAAATAGCAGGGCAAAAGCAATTGATGATGCTGAAGGGGTGGTCAAAATTTTGGCGGAGAAGGAGACAGACAAGATACTTGGCGTCCATATCATGGCGCCCAATGCTGGGGAGCTTATCCACGAGGCAGTACTGGCCTTGCAATACGACGCAGCTAGTGAGGATATTGCCCGCGTTTGCCATGCTCATCCAACGATGAGTGAGGCATTAAAGGAGGCCGCCATGGCAACTTATGACAAGCCCATTCACATCTATCAAGACCCCCAAGAGGCTTGTAAACAAGCTATTCTACATGGAGCAGACACCGATGAATCGTCAAGTATTGGTTATAAAAATATTCAGCTAAACCGGACTGCATCAACCGCTGAAGTAGCAGCAGGTGCCTTCATCTTCTCGTGTGCTTCCTTTGAATCAGCATCTACAAACTTTTTAATTTCAACATTTTGGCCTGCGAAGTCCCTTATCTCCCTGATCTGTTGA 3108 46.69 MGACVLIPACLISRILEPFAEIGSHRMVAEAEIGSHRMVAEAEIMCTKTVPVMNLNYHLRVAEDRDVQIDLPHPSSSPIFPEAVKCSDIAEDAHIVSTAIDFVPNIRSGSYADIGARDSMDDEHICIDDLSTHLRSMFKCPVPSGFYAVFDGHGGPHAAGFIKRNAIRLFFEDADWLKMLDISSISMKDLESSHRKAFLLADLALADEQSVGSSCGTTALTALILGSHLLVANAGDCRAVLCRKGVAVPMSQDHRPSNLLELKRVEAMGGFVDDGYVNGYISVTRTLGDWDLKLPNGSSSPLISEPQVEHAILTNDDEFLILGCDGIWDVMSSQYAVSLVRRGLRKHNDPHQSSQELVLEALRLNTSDNLTAIVICLASPSCIPQQRIWKPRSLTEEARIAQLQIQPQFQFLNFSISPNQMALANCARRKPNLLYRNLPISYSHSFNHSFSFASFSRRFASSGSDENDVVVIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAQHSFASHGVKFSSVEVDLPAMMAQKDKAVGNLTRGIEGLFKKNKVNYVKGYGKLVSPSEVSVDTIEGGNTVVKGKNIIIATGSDVKSLPGVTIDEKKIVSSTGALALXIATGSDVKSLPGVIIDEKKIVSSTGALALSKIPKKLVVVGAGYIGLEMGSVWGRLGSEITVVEFAPEIVPTMDGEVRKQFQRALEKQGMKFMLKTKVVGVDTSGDGVKLTLEPASGGEQTTLEADVVLVSAGRTPFTAGLGLDKLGIETDKAGRILVNERFVTNVDGVYAIGDVIPGPMLAHKAEEDGVACVEFIAGKIGHVDYDKVPGVVYTHPEVASVGKTEEQVKALGVEYRVGKFPFLANSRAKAIDDAEGVVKILAEKETDKILGVHIMAPNAGELIHEAVLALQYDAASEDIARVCHAHPTMSEALKEAAMATYDKPIHIYQDPQEACKQAILHGADTDESSSIGYKNIQLNRTASTAEVAAGAFIFSCASFESASTNFLISTFWPAKSLISLIC 1035
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
17 475767 486058 - Cp4.1LG17g00060.1 Cpe17g00084 483402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe17g00084 1035 Gene3D - 840 960 IPR016156 GO:0016491|GO:0050660
Cpe17g00084 1035 PRINTS FAD-dependent pyridine nucleotide reductase signature 669 687 - -
Cpe17g00084 1035 PRINTS FAD-dependent pyridine nucleotide reductase signature 758 774 - -
Cpe17g00084 1035 PRINTS FAD-dependent pyridine nucleotide reductase signature 600 618 - -
Cpe17g00084 1035 PRINTS FAD-dependent pyridine nucleotide reductase signature 469 488 - -
Cpe17g00084 1035 PRINTS FAD-dependent pyridine nucleotide reductase signature 787 809 - -
Cpe17g00084 1035 Pfam Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 841 950 IPR004099 GO:0045454
Cpe17g00084 1035 Gene3D - 96 380 IPR036457 -
Cpe17g00084 1035 PANTHER LEGHEMOGLOBIN REDUCTASE 444 633 - -
Cpe17g00084 1035 SUPERFAMILY PP2C-like 99 378 IPR036457 -
Cpe17g00084 1035 SUPERFAMILY FAD/NAD(P)-binding domain 465 865 IPR036188 -
Cpe17g00084 1035 SUPERFAMILY FAD/NAD-linked reductases, dimerisation (C-terminal) domain 837 960 IPR016156 GO:0016491|GO:0050660
Cpe17g00084 1035 Gene3D - 639 832 IPR036188 -
Cpe17g00084 1035 ProSitePatterns PPM-type phosphatase domain signature. 146 154 IPR000222 GO:0043169
Cpe17g00084 1035 SMART PP2C_4 97 375 IPR001932 -
Cpe17g00084 1035 Gene3D - 461 635 IPR036188 -
Cpe17g00084 1035 Pfam Pyridine nucleotide-disulphide oxidoreductase 468 822 IPR023753 GO:0016491
Cpe17g00084 1035 SMART PP2C_SIG_2 122 377 IPR001932 -
Cpe17g00084 1035 Pfam Protein phosphatase 2C 115 369 IPR001932 -
Cpe17g00084 1035 ProSiteProfiles PPM-type phosphatase domain profile. 107 377 IPR001932 -
Cpe17g00084 1035 CDD PP2Cc 106 377 IPR001932 -
Cpe17g00084 1035 ProSitePatterns Pyridine nucleotide-disulphide oxidoreductases class-I active site. 502 512 IPR012999 GO:0016668
Cpe17g00084 1035 PANTHER DISULFIDE OXIDOREDUCTASE 444 633 - -
Cpe17g00084 1035 PANTHER DISULFIDE OXIDOREDUCTASE 634 967 - -
Cpe17g00084 1035 PRINTS Pyridine nucleotide disulphide reductase class-I signature 902 917 - -
Cpe17g00084 1035 PRINTS Pyridine nucleotide disulphide reductase class-I signature 468 490 - -
Cpe17g00084 1035 PRINTS Pyridine nucleotide disulphide reductase class-I signature 802 809 - -
Cpe17g00084 1035 PRINTS Pyridine nucleotide disulphide reductase class-I signature 924 944 - -
Cpe17g00084 1035 PRINTS Pyridine nucleotide disulphide reductase class-I signature 759 773 - -
Cpe17g00084 1035 PRINTS Pyridine nucleotide disulphide reductase class-I signature 501 516 - -
Cpe17g00084 1035 PRINTS Pyridine nucleotide disulphide reductase class-I signature 837 858 - -
Cpe17g00084 1035 PANTHER LEGHEMOGLOBIN REDUCTASE 634 967 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe08g00139 Cpe-Chr8:898172 Cpe17g00084 Cpe-Chr17:475767 0 dispersed
Cpe12g00314 Cpe-Chr12:2073784 Cpe17g00084 Cpe-Chr17:475767 4.97E-67 dispersed
Cpe12g00869 Cpe-Chr12:7607690 Cpe17g00084 Cpe-Chr17:475767 3.29E-107 dispersed
Cpe17g00816 Cpe-Chr17:6373839 Cpe17g00084 Cpe-Chr17:475767 2.13E-35 dispersed
Cpe17g00084 Cpe-Chr17:475767 Cpe17g00726 Cpe-Chr17:5769558 3.73E-113 wgd
Cpe17g00084 Cpe-Chr17:475767 Cpe03g01315 Cpe-Chr3:10699272 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
50768 PF07992 Pyr_redox_2 1.00E-67 CL0063 Cpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe17g00084 K00382 - csv:101207718 907.131