Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe17g00090 ATGAGAATGTGGGAGGCCTCACCCTGGTCCCTGCTGTGCGTTCTTACAGGGCTGTACGCGCTTGTGTTGGTTGCAAGAATACGAAGAAAACCAAAGGCGAGGGCATACAGGTTTCCTCCAGGGAGGAGAAGCTGGCCTCTAATAGGCGATAGCTTGCAGTGGTACAGTGCGGTGGCAAGCTCTCATCCGCCCAAGTATGTTGAAGAACAGGCCAAAAGGTACGGGAAGATCTTCTCGTGCCGTGTGTTCGGGAAATGGGCAGTGGTGTCGGTGGATCCCGTGTTTAACCGATACGTTATGCAAAACGAAGGCAAGTTGTTCAAATCCAGCTACCCCAAATCTTTCAGAGATTTGGTAGGGACCAACGGTGTGATCACAGCACAAGGGGAACAACAAAGGAAACTCCATGCAATGGCCTCCAATATGATGCGCCTACATGACCTCAAATTTCAGTTCCTGCGAGATATTCAGATCATAATCATTCAAACCTTGGCCACTTTCCATAACGGCCAACTCATATGTCTCCAAGACATAGCCATTAATCTAATGGTAACTCAGGTACTAGGAGTGTCGAGTGAATCAGAAGTGGATGAAATTAGTGGGTTATTTTACGACTTCGTGGATGGCTGTTTGTCTGTTCCTATCAACTTTCCTGGCTTTGCCTATTACAGGGCGATGAAGGCGAGGGAGCAAATGATAGGCAAAATAAAGAAGAAAATAGCGTGGCATAAGGCGAGGATGGCAGAGGGAAGGAGCGGGGAGGGAATGTTGGGAGGAGTATTGGAGGAGCAGAAGTTGTCGGATGAGGCAGTTGCTGATTTCATTATCAATCTTCTTTTTGCTGGGAATGAAACCACATCTAAAACAATGCTTTTTGCAGTCTATTTCCTAACCCACTCACCCACAGCAATGAAGCAACTTGTGGATGAGCAACAGAGTTTAACAAACAACAATGGGGATCATACAATCACATGGCAGGATTACAAATCCATGCCCTTTACTCAATGTTTGCAATTCACTTCCCGCGAAATGGCCTCCGCCTTGCAGATGACTCCTCAGTTAGAGCAGATCCATGGTGAAATTCGCGACACTTTTCGAGCACTTTCAAATGGGTTCCAAAAACTGGATAAGATCAAGGATTCGAATAGGCAAAGTAAGCAATTGGAAGAGCTCACAGGAAAGATGAGGGAATGTAAAAGATTAATAAAAGATTTTGACCGTGAAATCAAGGATGAAGAGACCAAAAGTTCACCGGAAGTGCATAAGCAGCTCAATGATGAGAAGCAATCAATGGACATGAGGTTGCCAAATCATAAGCAAGCAGATTTGCTGTTCTGCTGTGGTGAGACTGAGTTACATGTATCACTTATTGATACTATCAAAGAGCTGAATTCATTTGTTGCATTGAGGAAAACGTACATGAATAGTCTTGGTAATAAAAGGGTTGAGTTATTTGATGAGGGAGGTGTAAGTCAACCTACAGCTGATGATAATGTTCGGATGGCCTCATTATCTATTTTTCTCATTCGATTGGCATGCCTTTGTGCTGTAGCAATGACAAATCAAGAGCTTATAGACGCTGGGAAGAAGACAATGGATGAGACGGATCAGGCTATTGAACGCACTCAAAAGGTGGTTGAACAAACTATTGAAGTGGGAACTCAAACTGCTGTTACATTAAAAGGCCAAACTGAACAAATGGGCCGCATAGTAAATGAGCTTGACACAATTAATTTTTCGATTAAGAAAGCATCCCAGCTTGTGAAAGAAATTGGGAGACAGGTTGCTACGGATAAGTGCATCATGCTGTTTCTATTCCTCATTGTCTGTGGAGTAATAGCCATTATCGTAGTGAAGATTGTGAACCCCAACAACAAAGACATCAGGGATATTCCTGGACTGGCACCTCCAGCTCCTGCAAGGAGGCTTTTGTATCTGAGGACGCCTGAACATTTCGAGTAA 1962 44.19 MRMWEASPWSLLCVLTGLYALVLVARIRRKPKARAYRFPPGRRSWPLIGDSLQWYSAVASSHPPKYVEEQAKRYGKIFSCRVFGKWAVVSVDPVFNRYVMQNEGKLFKSSYPKSFRDLVGTNGVITAQGEQQRKLHAMASNMMRLHDLKFQFLRDIQIIIIQTLATFHNGQLICLQDIAINLMVTQVLGVSSESEVDEISGLFYDFVDGCLSVPINFPGFAYYRAMKAREQMIGKIKKKIAWHKARMAEGRSGEGMLGGVLEEQKLSDEAVADFIINLLFAGNETTSKTMLFAVYFLTHSPTAMKQLVDEQQSLTNNNGDHTITWQDYKSMPFTQCLQFTSREMASALQMTPQLEQIHGEIRDTFRALSNGFQKLDKIKDSNRQSKQLEELTGKMRECKRLIKDFDREIKDEETKSSPEVHKQLNDEKQSMDMRLPNHKQADLLFCCGETELHVSLIDTIKELNSFVALRKTYMNSLGNKRVELFDEGGVSQPTADDNVRMASLSIFLIRLACLCAVAMTNQELIDAGKKTMDETDQAIERTQKVVEQTIEVGTQTAVTLKGQTEQMGRIVNELDTINFSIKKASQLVKEIGRQVATDKCIMLFLFLIVCGVIAIIVVKIVNPNNKDIRDIPGLAPPAPARRLLYLRTPEHFE 653
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
17 520332 528775 - Cp4.1LG17g00070.1 Cpe17g00090 483408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe17g00090 653 Gene3D - 521 599 - -
Cpe17g00090 653 Pfam Cytochrome P450 39 335 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe17g00090 653 Coils Coil 388 415 - -
Cpe17g00090 653 PANTHER CYTOCHROME P450 SUPERFAMILY PROTEIN 24 337 - -
Cpe17g00090 653 PRINTS E-class P450 group I signature 71 90 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe17g00090 653 PRINTS E-class P450 group I signature 270 287 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe17g00090 653 PRINTS E-class P450 group I signature 290 316 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe17g00090 653 SMART tSNARE_6 524 591 IPR000727 -
Cpe17g00090 653 SUPERFAMILY Cytochrome P450 34 336 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe17g00090 653 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 529 591 IPR000727 -
Cpe17g00090 653 CDD SNARE_SNAP25N_23N_29N_SEC9N 528 590 IPR044766 GO:0005484|GO:0031201
Cpe17g00090 653 SUPERFAMILY SNARE fusion complex 519 592 - -
Cpe17g00090 653 PANTHER CYTOCHROME P450 26 24 337 - -
Cpe17g00090 653 Gene3D Cytochrome P450 27 338 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe14g00906 Cpe-Chr14:7622538 Cpe17g00090 Cpe-Chr17:520332 4.08E-90 dispersed
Cpe17g00090 Cpe-Chr17:520332 Cpe01g01044 Cpe-Chr1:6174460 4.77E-53 dispersed
Cpe12g00349 Cpe-Chr12:2357650 Cpe17g00090 Cpe-Chr17:520332 5.12E-163 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe17g00090 - K08494 mcha:111025171 486.878