Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe17g00102 ATGAGAGCTTCAAATCATGGCTTCTTCTCCCTCTTTTCTGTACTGCTTCTCAGTACTCTCCTTGCTGTTCAAGCCGTCCCCAAGGGCGCTCTGAGCAATAATGCCTATTGGCGAACCTGCCCCAAAGCTTTGAGAATTATCCGAGACACCACCTTCCGGCTCGCTCGGTCGAATCCCGGTCTCGGAGCGCAACTCCTCCGAGTTCAATTCCACGACTGCTTCGTTCGGGGATGCGACGCATCAGTTCTGTTAGATAGTATTAGCGGAACTCCATCGGAAAAGGAAGCAAGACCGAATTTATCGTTATTAGGGTTCGACGCTATTGACACAATCAAGTCGGAGGTTGAGAAGGCTTGCCCTGGAGTTGTCTCTTGTGCCGACATTCTTGCCGTTGCTGCTCGTGACGCTGTTTCCTTTCCATTCAAAAACCGGCAGCTGTGGCCAGTTTTAACCGGAAGAAGAGATGGAACTGTTTCGCGATCATCAGAAGTTACCGGCAATATCCCGTCGCCGTTCTCTAATTTCACCACTCTTAAGCAAATCTTTGAGAATAAAGGCCTTACCGTGAGCGATCTGGTGATTTTATCAGCTCATTGTGGCACATTCTCAAGGAGGCTCTACAACTTCACAGGCCAAGGGGACGCAGATCCTTCATTAAATCCAATCTACGCCAACTTTCTAAGACAAAAATGTCCAAATCCAGCTGATTCTTCAATTACTGTAGAAATGGACCCAAGGAGTTCACGTTCATTTGACACTGATTACTTCAAGATCCTCACACAGCACAAAGGTTTGTTTCAATCCGACGCTGCGCTCTTGACCGACGACTCGTCGTCTCGGATCGTTAAAGAGTTGCAGAAGCCCAAAGCTTTCTTCCCTAGCTTTGCTAACTCCATGTTGAAGATGTCAGCCATTGAAGTCCTCACTGGAAAGAATGGTGAAATAAGGAACCGATGTCGTTTTGTTAATTGA 972 47.33 MRASNHGFFSLFSVLLLSTLLAVQAVPKGALSNNAYWRTCPKALRIIRDTTFRLARSNPGLGAQLLRVQFHDCFVRGCDASVLLDSISGTPSEKEARPNLSLLGFDAIDTIKSEVEKACPGVVSCADILAVAARDAVSFPFKNRQLWPVLTGRRDGTVSRSSEVTGNIPSPFSNFTTLKQIFENKGLTVSDLVILSAHCGTFSRRLYNFTGQGDADPSLNPIYANFLRQKCPNPADSSITVEMDPRSSRSFDTDYFKILTQHKGLFQSDAALLTDDSSSRIVKELQKPKAFFPSFANSMLKMSAIEVLTGKNGEIRNRCRFVN 323
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
17 634253 636065 + Cp4.1LG17g01030.1 Cpe17g00102 483420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe17g00102 323 CDD secretory_peroxidase 31 322 IPR033905 GO:0004601|GO:0042744
Cpe17g00102 323 PRINTS Plant peroxidase signature 122 132 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cpe17g00102 323 PRINTS Plant peroxidase signature 297 310 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cpe17g00102 323 PRINTS Plant peroxidase signature 40 59 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cpe17g00102 323 PRINTS Plant peroxidase signature 242 257 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cpe17g00102 323 PRINTS Plant peroxidase signature 103 116 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cpe17g00102 323 PRINTS Plant peroxidase signature 64 84 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cpe17g00102 323 PRINTS Plant peroxidase signature 258 275 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cpe17g00102 323 Gene3D - 36 323 - -
Cpe17g00102 323 PRINTS Haem peroxidase superfamily signature 143 155 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cpe17g00102 323 PRINTS Haem peroxidase superfamily signature 244 259 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cpe17g00102 323 PRINTS Haem peroxidase superfamily signature 62 76 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cpe17g00102 323 PRINTS Haem peroxidase superfamily signature 123 140 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cpe17g00102 323 Pfam Peroxidase 53 285 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cpe17g00102 323 PANTHER PEROXIDASE 8 322 - -
Cpe17g00102 323 Gene3D Peroxidase, domain 2 169 302 - -
Cpe17g00102 323 ProSiteProfiles Plant heme peroxidase family profile. 30 323 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cpe17g00102 323 PANTHER PEROXIDASE 25-RELATED 8 322 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cpe17g00102 323 ProSitePatterns Peroxidases active site signature. 62 73 IPR019794 GO:0004601
Cpe17g00102 323 SUPERFAMILY Heme-dependent peroxidases 31 323 IPR010255 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe05g01450 Cpe-Chr5:10105551 Cpe17g00102 Cpe-Chr17:634253 1.74E-96 dispersed
Cpe16g00452 Cpe-Chr16:5765578 Cpe17g00102 Cpe-Chr17:634253 3.56E-75 dispersed
Cpe17g00102 Cpe-Chr17:634253 Cpe19g00876 Cpe-Chr19:6426026 3.14E-76 dispersed
Cpe17g00102 Cpe-Chr17:634253 Cpe17g00723 Cpe-Chr17:5760134 2.48E-65 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe17g00102 K00430 - csv:101215642 475.322